Multiz Alignments of 60 Vertebrates

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Capitalize exons based on show bases

Place cursor over species for alignment detail. Click on 'B' to link to browser for aligned species, click on 'D' to get DNA for aligned species.
Alignment block 1 of 114 in window, 37105284 - 37105484, 201 bps B D Mouse tttc----------tc-tttgttcaccataacaaatcataaag----------ctagcacaaattcaagg B D Rat tttc----------tc-cttgttcaccataacaaatcataagg----------ctagcacaaattcaagg B D Squirrel tgtc----------tctctcatttaccaaaacaaattacaaga----------ctagcataaattcaagt B D Rabbit agtt----------tattctgttcaccaaaacaaaatttaaggggaggagaatccagcacacttagaaat B D Human tgtc----------tattgtgtttgctaaaacaaatcacaagg----------ctacta-aaattcaagg B D Chimp tgtc----------tattgtgtttgctaaaacaaatcacaagg----------ctagta-aaattcaagg B D Gorilla tgtc----------tattgtgtttgctaaaacaaatcacaagg----------ctagta-aaattcaagg B D Orangutan tgtc----------tattctgtttgctaaaacaaatcacaagg----------ctagta-aaattcaagg B D Gibbon tgtc----------tattctgtttgctaaaacaaatcacaagc----------ctagta-aaattcaagg B D Rhesus tatc----------tattctgtttgctaaaacaaatcacaaga----------ctagta-aaattcaagg B D Baboon tatc----------tattctgtttgctaaaacaaatcacaaga----------ctagta-aaattcaagg B D Tarsier tgta----------tgttctatttgccaaaacaaatcacaaga----------ctagaacaaattcaagg B D Bushbaby tgtc--------------ctgttcaccaaagcaaatcacaagg----------atagta-taattcaacg B D Pig catc----------tattttgttcaccaaaacaagtcacaaag----------gcagcccaaattcaagg B D Alpaca tgtc----------tattctgttcagcaaaacaaatcacaaag----------ccagcccaaattcttgg B D Dolphin agtc----------tattttattcaccaaaacaagtcacaagg----------ccagcccaaattcatgg B D Cow agag----------tattttattgaccaaaacaagttacaaga----------ccagtccaaattcaagg B D Cat catc----------tattctgtt---caaaataagtcacaaag----------ctagaccaaattcaagg B D Dog catc----------tattctgttaaccaaaataaggcacaaag----------ctagctcaaattcaggg B D Panda cctc----------tattccattcaccaaaataagtcacaaag----------ctaacccaaatgca-gc B D Horse --------------tgttctgttagccaaaacaagtcacaaag----------ccggtccaaattcaagg D Little brown bat gatc----------tattctgtttgccaaaacaagtcacaaag----------ctagcccagattcaagg B D Megabat ggtc----------tcttctgtttgccaaaacaagtcacaa--------------agcccaaattcaaga B D Elephant tgtcatttctgctgtagtctatttgccaaaacaagtcacaaga----------caagccagaattcaagg B D Manatee tatcatttctgcattagtctgttcgccaaaacaagtaacaagg----------ctagccaaaattcaaga B D Armadillo tgccagttctactgtgttctctttgccaaaacaagtcacaagg----------ctagcccaaattcaagg B D Sloth cgaca---cttctgtattttcttcaccaaaacaagtcacaagg----------ctagcccaaattcaagg B D Guinea pig ====================================================================== B D Naked mole-rat ====================================================================== B D Squirrel monkey ====================================================================== B D Marmoset ====================================================================== B D Shrew ====================================================================== B D Hedgehog ====================================================================== B D Mouse lemur ====================================================================== B D Wallaby ====================================================================== B D Kangaroo rat ====================================================================== B D Rock hyrax ====================================================================== B D Opossum ====================================================================== B D Lizard ====================================================================== B D Budgerigar ====================================================================== B D Tasmanian devil ====================================================================== B D Platypus ====================================================================== B D Zebrafish ====================================================================== B D Zebra finch ====================================================================== B D Chicken ====================================================================== B D X. tropicalis ====================================================================== B D Coelacanth ====================================================================== B D Painted turtle ====================================================================== B D Turkey ====================================================================== Mouse ggatgc--------------------------atggttctgaaaaactacatggaaa----c--cagaag Rat ggatgc--------------------------atgcctctgaaaaactacatggaaa----c--cagaag Squirrel ggaagagagattatccacac-ttactga-tg-gtggatctgagaagttacattgtaaagagc--aggaaa Rabbit gg------------------------------gaggttctgaaaaggcacattgtgaagagc--acagag Human gaagggaaaatcagccatgc-ctgttga-tgtgaggatctgaaaagtcacattgcaaataac--tggaaa Chimp gaagggaaaatcagccatgc-ctgttga-tgtgaggatctgaaaagtcacattgcaaataac--tggaaa Gorilla gaagggaaaatcagccatgc-ctgttga-tgtgaggatctgaaaagtcacattgcaaataac--tggaaa Orangutan gaagggaaaatcagccatgc-ctgttga-tgtaaggatctgaaaagtcacattgcaaataac--tggaaa Gibbon gaagggaaaatcagccatga-ctattaa-tgtgaagatctgaaaagtcacattgcaaataac--tggaaa Rhesus gaagcaaaaatcagccatgg-ctattga-tgtgaggatctgaaaagtcacattgcaaataac--tggaaa Baboon gaagcaaaaatcagccatgg-ctattga-tgtgaggatctgaaaagtcacattgcaaataac--tggaaa Tarsier gaagagaagaccagccctac-ctgttgc-tgtgaggatttgaaaagccacatcataaatagc-atggaaa Bushbaby gaagggaaaactaaccacac-atgttga-tg-aaggatatgataagtcacattgtaaagagc-atggaga Pig ggaggaggaatcaactatag-ttagtga-tagaagaatctgaaaagatacattctaaagagc-atggaga Alpaca gggaggggaatcaaccacag-ttacaga-tggaagaatctgagaagatacattgtaaagacc-atggaga Dolphin ggaggagcaatcaaccatag-ttagtga-tgggagaatctgaaaagttacattgtaaagaac-atggaga Cow ggaggaagaataagctgtag-ttgttga-tggaagaatctgaaaaattacattgtaaagagc-at----a Cat ggaggagaaattaaccacag-ttattga-gaggagaatttgaaaagtcacattataaagagc-atgaaca Dog agacgggaaatcaaccatag-ttatcga-gaggagaatctggaaagtcac---ataaagagt-atggaga Panda agaggggaaatcaaccacag-ttactga-gaggagaatgtgagaagtcacattataaagagt-atggaga Horse agaggaaacatcaactgcag-ttattgatggggagaatatgaaaagtcacgttgtaaagagg-atggaga Little brown bat ggaggggaagtcaaacaccactttttga-agggtcagtctgaaaaacgatattgttaaaagc-atggaga Megabat ggagaggac-tcagacacagtttattga-tgggagaatctgagaaatcatgttg---------------- Elephant gtagggggaatc-----cac-cccttga-tggaagtatctgaaaagtcacattgcagagaat-gtggata Manatee ggagggggaatcaactgcac-ctcttga-tggaagtatctgaaaagtcacatcgcaaagagc-atggata Armadillo agaggggaaatcaaccacac-ctcttga-tgggaagatccaaaagatcacattacaaagagccatgaata Sloth agggaggaaatcagccacac-ctctcga-tgggaggatccaaaaggttgcgttgcaaagagctgtggata Guinea pig ====================================================================== Naked mole-rat ====================================================================== Squirrel monkey ====================================================================== Marmoset ====================================================================== Shrew ====================================================================== Hedgehog ====================================================================== Mouse lemur ====================================================================== Wallaby ====================================================================== Kangaroo rat ====================================================================== Rock hyrax ====================================================================== Opossum ====================================================================== Lizard ====================================================================== Budgerigar ====================================================================== Tasmanian devil ====================================================================== Platypus ====================================================================== Zebrafish ====================================================================== Zebra finch ====================================================================== Chicken ====================================================================== X. tropicalis ====================================================================== Coelacanth ====================================================================== Painted turtle ====================================================================== Turkey ====================================================================== Mouse ---------aatggaatgttttatcagttttaatcatctgtcag-aa----aaa-tagctaat-----aa Rat ---------aatggaa---------agtttgaatcatctgtcac-aa----gaa-cagccaat-----aa Squirrel ---------aatgaagaattttagcaatttt-atattccatcac-aa----caa-ctaatgaa-----aa Rabbit aatattaacaatgaggggctttggcagcttt-gtaaactgtcac-ca----aaa--------------aa Human -ctaggaggaatgaaggattttgactgtttttgttatctatcct-aa----gaa-caactaatgag--aa Chimp -ctaggaggaatgaaggattttgactgtttttgttatctatccc-aa----gaa-caactaatgag--aa Gorilla -ctaggaggaatgaaggattttgactgtttttgttatctatcct-aa----gaa-caactagtgag--aa Orangutan -ctaggaggaatgaaggattttgactgtttttgttatctatcct-aa----gaa-caactaatgag--aa Gibbon -ctaggaggaatgaaggattttgactgtttttgttatctatcct-aa----gaa-caactaatgag--aa Rhesus -ctaggaggaatgaaggattttgactgtttttgttatctatcct-aa----gaa-caactaatgag--aa Baboon -ctaggaggaatgaaggattttgactgtttttgttatctatcct-aa----gaa-caactaatgag--aa Tarsier -tcaggaggaatgaaggagtctggcagtttttgtaaactgtcat-ac----aaa-aaactaatgag--aa Bushbaby -ccaggaaaaatgaaggagttgggcaatttttgtaatctattatcaa----gaa-c------tgag--ag Pig -cagggagtgatacaggattttggcaatttttgtcatctgtcac-ag----gaa-caactagcgaa--aa Alpaca -cagggaggaacaaaagattttggcaaattttgta----atcac-aa----gaa-caacta---ag--aa Dolphin -caggaaggaataaaggattttggcaatttttgtaatctatcag-ga----gaa-caactaatgag--aa Cow -caaacaagaataaaggattttggcagtttttgcagtctatcac-aa----aaa-caactaatgag--aa Cat -cagggaggaagaaaggatttgggcaatttttgtaa----tcac-aa----gaa-cagctaatgtgagaa Dog -c---gggaaatgaagaatttgagaaatttttgtaa----atac-aa----gaa-caacga--------- Panda -cagggaggaatgaaggatttggggaatttttgaaa----ataa-aa----aaa-caactaat-----aa Horse -c----agaattgaaggattttggcaatctttgtaa----ttgc-ca----aac-taataaa------aa Little brown bat -t--ggagaaacgaaggatttggacaatttttataatctgtcac-aa----gagccaagtaatgag--aa Megabat ----ggaagaatgaaagatttgggcagtgtttgtaatctatcac-aa----gag-caagcaatgag--aa Elephant -cagggaaaaacaaaggattgtggtaaattttgtaatctataac-aacaagaaa-caactaatga---ga Manatee -cagggaggaatgaaggattatggtaaattttataatctataac-aacaagaaa-caactaatga---ga Armadillo -tggggaagaatgaaggataatgaaaatttttctaatctatcac-aacaggaaa-caac----------a Sloth -cagggaagaatgatggataatggcaatttttgtaatctgtcac-aacaagaaa-caac----------a Guinea pig ====================================================================== Naked mole-rat ====================================================================== Squirrel monkey ====================================================================== Marmoset ====================================================================== Shrew ====================================================================== Hedgehog ====================================================================== Mouse lemur ====================================================================== Wallaby ====================================================================== Kangaroo rat ====================================================================== Rock hyrax ====================================================================== Opossum ====================================================================== Lizard ====================================================================== Budgerigar ====================================================================== Tasmanian devil ====================================================================== Platypus ====================================================================== Zebrafish ====================================================================== Zebra finch ====================================================================== Chicken ====================================================================== X. tropicalis ====================================================================== Coelacanth ====================================================================== Painted turtle ====================================================================== Turkey ====================================================================== Mouse attataatg-----gggaa--aaagttac-ttagtaaaaag--gcttgtgatctgaaacccag-tttt-a Rat attattacg-----gggaa--aaagttac-tcagtagaaag--gtttgtgatctggaacccag-tttt-a Squirrel catataatg-----aaggagcaaagttacaacatcaaaaag--gttcatgatctgtggactca-cttt-a Rabbit gtgatgaag-----gggg---aaagtcacagtagcaaaaag--atttattatctatggactcactttt-c Human gatacaata-----aaggggaaaagttacagtagcaaaaat--gttcatgatctagggacccactttc-a Chimp gatacaata-----aaggggaaaagttacagtagcaaaaat--gttcatgatctagggacgcactttc-a Gorilla gatacaata-----aaggggaaaagttacagtagcaaaaat--gttcatgatctagggacccactttc-a Orangutan gatacaata-----aaagggaaaagttatagtagcaaaagg--gttcatgatctagggacccactttc-a Gibbon gatacaata-----aaggggaaaagttacagtagcaaaaag--gttcatgatctagggacccactttc-a Rhesus gatacaatg-----aaggggaaaagttacagtagcaaaaag--tttcatgatctgtggacccactttc-a Baboon gatacaatg-----aaggggaaaagttacagtagcaaaaag--gttcatgatctgtggacccactttc-a Tarsier gatatattg-----gtgaggaaaaattacagtagcaaaaat--gttcatgatctatggacccacttat-a Bushbaby gatataatg-----aaagcaaaaagttacaatagtgaaaag--atttgtgacctgtgcacccactttt-a Pig gatataata-----aagggatagagttaaaatagcaagaaa--gctcatgatctgtggac----tttt-a Alpaca gatataatg-----aagaaaaagagtta-aatagcaagaaa--gctcatgatctgtggacccactttt-g Dolphin gatataatg-----aagggaaagagttacaatagcaagaaa--gctcatgatctgtggacccacttct-a Cow tatataatg-----aagggaaagagttacagaagcaagaac--gct-ataatatgtgaacctattttt-a Cat gatacaacg-----aa--gagagagttacaatagcaaaaac--tttcatagtctgtggacccgctttt-a Dog ---ataatg-----a----agagagtt---aaagcaaaaag--tttcgtggtctatggacccacttttaa Panda gatataatg-----aa--gagagagtt---atagcaaaaca--ttgcatggtctatagatccactttt-a Horse ggtataatg-----aagggaaagaggtacagtagcaaaaaa--gttcttcatctgtggacccactttt-a Little brown bat gatataatg-----aaggaaaggagtttcaatagcaaaaac--gttcatgatata--------------- Megabat gataaagtgttacaatgggaaagagttacaaagcaaaaaac--gtacatgatctgtggacccactttt-a Elephant gataaaatg-----aaggg-aaaaattacagtagtaaaaaaagattcatgatctgtggacccattttt-a Manatee gatataatg-----aaggg-aaaaattacaataataaaaaa--gtttatgatctgtggacccattttt-g Armadillo attataata-----aagga-aaaaattacagtaacaaa-----gctcatgatctgtggaccca-tttt-a Sloth attaagata-----taat--aaatattacagtagcaaaaag--gttcatgatctgtgaacccactttt-a Guinea pig ====================================================================== Naked mole-rat ====================================================================== Squirrel monkey ====================================================================== Marmoset ====================================================================== Shrew ====================================================================== Hedgehog ====================================================================== Mouse lemur ====================================================================== Wallaby ====================================================================== Kangaroo rat ====================================================================== Rock hyrax ====================================================================== Opossum ====================================================================== Lizard ====================================================================== Budgerigar ====================================================================== Tasmanian devil ====================================================================== Platypus ====================================================================== Zebrafish ====================================================================== Zebra finch ====================================================================== Chicken ====================================================================== X. tropicalis ====================================================================== Coelacanth ====================================================================== Painted turtle ====================================================================== Turkey ====================================================================== Mouse ttagaa- Rat ttagat- Squirrel ttagaa- Rabbit ttagaa- Human ttagaa- Chimp ttagaa- Gorilla ttagaa- Orangutan ttagaa- Gibbon ttagaa- Rhesus ttagaa- Baboon ttagaa- Tarsier ttagaa- Bushbaby ttagaa- Pig ttagaa- Alpaca ttagaa- Dolphin ttagaa- Cow ttagaa- Cat ttagaa- Dog ttagaa- Panda ttagaa- Horse ttaaaa- Little brown bat -taaaa- Megabat ttaaaa- Elephant atagaaa Manatee atagaaa Armadillo ttagaaa Sloth ttagaaa Guinea pig ======= Naked mole-rat ======= Squirrel monkey ======= Marmoset ======= Shrew ======= Hedgehog ======= Mouse lemur ======= Wallaby ======= Kangaroo rat ======= Rock hyrax ======= Opossum ======= Lizard ======= Budgerigar ======= Tasmanian devil ======= Platypus ======= Zebrafish ======= Zebra finch ======= Chicken ======= X. tropicalis ======= Coelacanth ======= Painted turtle ======= Turkey ======= Inserts between block 1 and 2 in window B D Pig 217bp B D Alpaca 2bp B D Dolphin 6bp B D Cow 6bp B D Cat 3bp B D Dog 3bp B D Panda 3bp B D Horse 3bp D Little brown bat 3bp B D Megabat 3bp Alignment block 2 of 114 in window, 37105485 - 37105489, 5 bps B D Mouse tag----ac--------- B D Rat tag----ac-aat----g B D Squirrel tta----ta-aat---gg B D Rabbit aca----ac-ttg---tg B D Human acc----ca-aat----- B D Chimp acc----ca-aat----- B D Gorilla acc----ca-aat----- B D Orangutan acc----ca-aat----- B D Gibbon acc----ca-aat----- B D Rhesus acc----ca-aat----- B D Baboon acc----ca-aat----- B D Tarsier acc----ct-aag----- B D Bushbaby acccagaca-aat----- B D Alpaca ----------aga---aa B D Dolphin ----------aaa---aa B D Cow ----------aaa---aa B D Cat --------a-aaa----- B D Dog --------a-aaa----- B D Panda --------a-aaa----- B D Horse --------t-agaagtag D Little brown bat --------t-agaaaaaa B D Megabat --------t-ggaaacaa B D Elephant -------ca-gaa----- B D Manatee -------ca-aaa----- B D Armadillo -------cataaa----- B D Sloth -------cataga----- B D Pig ================== B D Guinea pig ================== B D Naked mole-rat ================== B D Squirrel monkey ================== B D Marmoset ================== B D Shrew ================== B D Hedgehog ================== B D Mouse lemur ================== B D Wallaby ================== B D Kangaroo rat ================== B D Rock hyrax ================== B D Opossum ================== B D Lizard ================== B D Budgerigar ================== B D Tasmanian devil ================== B D Platypus ================== B D Zebrafish ================== B D Zebra finch ================== B D Chicken ================== B D X. tropicalis ================== B D Coelacanth ================== B D Painted turtle ================== B D Turkey ================== Alignment block 3 of 114 in window, 37105490 - 37105522, 33 bps B D Mouse tatacatgtgcatgcacac----aca----------tacacatatat B D Rat catacatgtgcgtgcacac----aca----------catacatatat B D Squirrel cataaacatctgtgtgcac----ata----------tacaagtgcaa B D Rabbit tatacatctacagggacat----ata-------------------gt B D Human tacacatctacatgcacata---ata----------tacacatacag B D Chimp tacacgtctacatgcacata---ata----------tacacatacag B D Gorilla tacacatctacatgcacata---ata----------tacacatacag B D Orangutan tacacatctacatgcacata---ata----------tacac------ B D Gibbon tacacatctacatgcacata---ata----------tacacatacac B D Rhesus tacacatctacatgcacata---ata----------tacacacacac B D Baboon tacacgtctacatgcacata---ata----------tacacacacac B D Tarsier taaacatctacatatctat----gca----------catatatatag B D Bushbaby tacacatccacatgtacatgc--att----------cacgtgtatgt B D Alpaca tatatatccacatgcacat----ata----tacacatatacatatat B D Dolphin tacatatctatatgtgcat----aca----------tacatatatat B D Cow tatatatatttacgtgtgt----acacatatgcacgtatatatatat B D Cat -atatatctacatgcacgt----atg----------caaatat---- B D Dog ---atatctgcaaggacat----ata----------c---------- B D Panda --tatatctgtgtgcacat----aca----------tgtatatggaa B D Horse tatatatctatgtatgcgt----aca----------tacacac---- D Little brown bat -atatatctacatgtgcat----aca----------tgcccatatac B D Megabat tatttacctacatgtacat----aca----------tgcgta----- B D Elephant aatatatatacatgcacac----ata----------cacatgtattt B D Manatee aatatatatacatgcacac----aca----------tgtacacatat B D Armadillo aatacacatatcagtgaacacagaca----------tatatatatta B D Sloth aatatacaaatgtgtgcac----aca----------catatatatga B D Opossum tgtccatgtgcatgcatat----aca----------tatacacacgt B D Pig =============================================== B D Guinea pig =============================================== B D Naked mole-rat =============================================== B D Squirrel monkey =============================================== B D Marmoset =============================================== B D Shrew =============================================== B D Hedgehog =============================================== B D Mouse lemur =============================================== B D Wallaby =============================================== B D Kangaroo rat =============================================== B D Rock hyrax =============================================== B D Lizard =============================================== B D Budgerigar =============================================== B D Tasmanian devil =============================================== B D Platypus =============================================== B D Zebrafish =============================================== B D Zebra finch =============================================== B D Chicken =============================================== B D X. tropicalis =============================================== B D Coelacanth =============================================== B D Painted turtle =============================================== B D Turkey =============================================== Alignment block 4 of 114 in window, 37105523 - 37105526, 4 bps B D Mouse --ggat B D Rat --ggat B D Squirrel --ggat B D Rabbit --ggac B D Human --gaag B D Chimp --gaag B D Gorilla --gaag B D Orangutan --gaag B D Gibbon --aaag B D Rhesus --gaag B D Baboon --aaag B D Tarsier --agag B D Bushbaby --agag B D Alpaca --ggag B D Dolphin --ggag B D Cow --gaag B D Cat --ggga B D Dog --agaa B D Panda --agaa B D Horse --atgc D Little brown bat atggag B D Megabat --agag B D Elephant --gggg B D Armadillo --gggg B D Sloth --ggag B D Pig ====== B D Manatee ------ B D Guinea pig ====== B D Naked mole-rat ====== B D Squirrel monkey ====== B D Marmoset ====== B D Shrew ====== B D Hedgehog ====== B D Mouse lemur ====== B D Wallaby ====== B D Kangaroo rat ====== B D Rock hyrax ====== B D Opossum ====== B D Lizard ====== B D Budgerigar ====== B D Tasmanian devil ====== B D Platypus ====== B D Zebrafish ====== B D Zebra finch ====== B D Chicken ====== B D X. tropicalis ====== B D Coelacanth ====== B D Painted turtle ====== B D Turkey ====== Inserts between block 4 and 5 in window B D Rabbit 298bp Alignment block 5 of 114 in window, 37105527 - 37105534, 8 bps B D Mouse ----------ggttatga B D Rat ----------ggttataa B D Squirrel ----------tgtaaagt B D Human ----------gcttgtga B D Chimp ----------ggttgtga B D Gorilla ----------ggttgtga B D Orangutan ----------ggttgtga B D Gibbon ----------ggttgtga B D Rhesus ----------ggttgtga B D Baboon ----------ggttgtga B D Tarsier ----------gattgtga B D Bushbaby ----------ggtcatga B D Alpaca ----------ggtagtga B D Dolphin ----------ggtggtga B D Cow ----------ggtgatgg B D Cat ----------gttcatga B D Dog ----------ggtcatga B D Panda ----------ggtcatga B D Horse ----------atatatga D Little brown bat ----------gatcagga B D Megabat ----------gatcgtga B D Elephant agacaggttaggt----- B D Armadillo t-----gttggga----- B D Sloth t------tggggt----- B D Pig ================== B D Manatee ------------------ B D Rabbit ================== B D Guinea pig ================== B D Naked mole-rat ================== B D Squirrel monkey ================== B D Marmoset ================== B D Shrew ================== B D Hedgehog ================== B D Mouse lemur ================== B D Wallaby ================== B D Kangaroo rat ================== B D Rock hyrax ================== B D Opossum ================== B D Lizard ================== B D Budgerigar ================== B D Tasmanian devil ================== B D Platypus ================== B D Zebrafish ================== B D Zebra finch ================== B D Chicken ================== B D X. tropicalis ================== B D Coelacanth ================== B D Painted turtle ================== B D Turkey ================== Inserts between block 5 and 6 in window B D Human 3bp B D Chimp 3bp B D Gorilla 36bp B D Orangutan 3bp B D Gibbon 3bp Alignment block 6 of 114 in window, 37105535 - 37105535, 1 bps B D Mouse a B D Rat a B D Squirrel a B D Human a B D Chimp a B D Orangutan a B D Gibbon a B D Rhesus a B D Baboon a B D Tarsier a B D Bushbaby a B D Alpaca g B D Dolphin g B D Cow a B D Cat g B D Dog g B D Panda g B D Horse a D Little brown bat g B D Megabat g B D Elephant g B D Armadillo g B D Sloth g B D Pig = B D Manatee - B D Rabbit = B D Guinea pig = B D Gorilla = B D Naked mole-rat = B D Squirrel monkey = B D Marmoset = B D Shrew = B D Hedgehog = B D Mouse lemur = B D Wallaby = B D Kangaroo rat = B D Rock hyrax = B D Opossum = B D Lizard = B D Budgerigar = B D Tasmanian devil = B D Platypus = B D Zebrafish = B D Zebra finch = B D Chicken = B D X. tropicalis = B D Coelacanth = B D Painted turtle = B D Turkey = Inserts between block 6 and 7 in window B D Rhesus 90bp B D Baboon 90bp B D Tarsier 2bp B D Bushbaby 2bp B D Alpaca 2bp B D Dolphin 2bp B D Cow 2bp B D Cat 2bp B D Dog 2bp B D Panda 2bp B D Horse 2bp D Little brown bat 3bp B D Megabat 3bp Alignment block 7 of 114 in window, 37105536 - 37105538, 3 bps B D Mouse gga-- B D Rat gaa-- B D Squirrel gat-- B D Human gg--- B D Chimp gg--- B D Orangutan gg--- B D Gibbon g---- B D Tarsier gg--- B D Bushbaby gg--- B D Alpaca a---- B D Dolphin g---- B D Cow a---- B D Cat g---- B D Dog g---- B D Panda g---- B D Horse g---- D Little brown bat g---- B D Megabat g---- B D Elephant --agt B D Armadillo --agt B D Sloth --ggt B D Pig ===== B D Manatee ----- B D Rabbit ===== B D Guinea pig ===== B D Rhesus ===== B D Gorilla ===== B D Naked mole-rat ===== B D Squirrel monkey ===== B D Marmoset ===== B D Shrew ===== B D Hedgehog ===== B D Mouse lemur ===== B D Wallaby ===== B D Kangaroo rat ===== B D Rock hyrax ===== B D Opossum ===== B D Lizard ===== B D Budgerigar ===== B D Tasmanian devil ===== B D Platypus ===== B D Zebrafish ===== B D Zebra finch ===== B D Baboon ===== B D Chicken ===== B D X. tropicalis ===== B D Coelacanth ===== B D Painted turtle ===== B D Turkey ===== Inserts between block 7 and 8 in window B D Gibbon 114bp B D Tarsier 16bp B D Bushbaby 16bp B D Alpaca 1bp B D Dolphin 1bp B D Cow 57bp Alignment block 8 of 114 in window, 37105539 - 37105539, 1 bps B D Mouse g B D Squirrel g B D Alpaca g B D Dolphin g B D Cat g B D Dog g B D Panda g D Little brown bat g B D Megabat g B D Elephant a B D Armadillo a B D Sloth a B D Pig = B D Manatee - B D Rabbit = B D Guinea pig = B D Cow = B D Rhesus = B D Horse - B D Bushbaby = B D Gibbon = B D Orangutan - B D Gorilla = B D Chimp - B D Human - B D Naked mole-rat = B D Squirrel monkey = B D Marmoset = B D Rat - B D Shrew = B D Hedgehog = B D Tarsier = B D Mouse lemur = B D Wallaby = B D Kangaroo rat = B D Rock hyrax = B D Opossum = B D Lizard = B D Budgerigar = B D Tasmanian devil = B D Platypus = B D Zebrafish = B D Zebra finch = B D Baboon = B D Chicken = B D X. tropicalis = B D Coelacanth = B D Painted turtle = B D Turkey = Alignment block 9 of 114 in window, 37105540 - 37105542, 3 bps B D Mouse tg----------t B D Rat tg----------t B D Squirrel tatacatgttatt B D Human ------------t B D Chimp ------------t B D Orangutan ------------t B D Bushbaby ----------ttt B D Alpaca ----------tgt B D Dolphin ----------tgt B D Cat ----------ggt B D Dog ----------tgt B D Panda ----------tgt D Little brown bat ----------tgt B D Megabat ----------tgt B D Elephant ----------tat B D Armadillo ----------tgt B D Sloth ----------tgt B D Pig ============= B D Manatee ------------- B D Rabbit ============= B D Guinea pig ============= B D Cow ============= B D Rhesus ============= B D Horse ------------- B D Gibbon ============= B D Gorilla ============= B D Naked mole-rat ============= B D Squirrel monkey ============= B D Marmoset ============= B D Shrew ============= B D Hedgehog ============= B D Tarsier ============= B D Mouse lemur ============= B D Wallaby ============= B D Kangaroo rat ============= B D Rock hyrax ============= B D Opossum ============= B D Lizard ============= B D Budgerigar ============= B D Tasmanian devil ============= B D Platypus ============= B D Zebrafish ============= B D Zebra finch ============= B D Baboon ============= B D Chicken ============= B D X. tropicalis ============= B D Coelacanth ============= B D Painted turtle ============= B D Turkey ============= Inserts between block 9 and 10 in window B D Human 4bp B D Chimp 4bp B D Orangutan 83bp B D Alpaca 1bp B D Dolphin 1bp B D Cat 71bp B D Elephant 11bp B D Armadillo 79bp B D Sloth 13bp Alignment block 10 of 114 in window, 37105543 - 37105544, 2 bps B D Mouse tt B D Rat tt B D Squirrel tt B D Human tg B D Chimp tg B D Tarsier tt B D Bushbaby tt B D Alpaca c- B D Dolphin t- B D Pig == B D Manatee -- B D Rabbit == B D Elephant == B D Guinea pig == B D Cow == B D Rhesus == B D Horse -- B D Panda -- B D Dog -- B D Gibbon == B D Orangutan == B D Gorilla == B D Naked mole-rat == B D Squirrel monkey == B D Marmoset == D Little brown bat -- B D Megabat -- B D Shrew == B D Armadillo == B D Sloth == B D Hedgehog == B D Mouse lemur == B D Wallaby == B D Cat == B D Kangaroo rat == B D Rock hyrax == B D Opossum == B D Lizard == B D Budgerigar == B D Tasmanian devil == B D Platypus == B D Zebrafish == B D Zebra finch == B D Baboon == B D Chicken == B D X. tropicalis == B D Coelacanth == B D Painted turtle == B D Turkey == Inserts between block 10 and 11 in window B D Alpaca 15bp B D Dolphin 69bp Alignment block 11 of 114 in window, 37105545 - 37105557, 13 bps B D Mouse tctaaatta----aagt B D Rat tctcaatta----aagt B D Squirrel tttaagtta----aata B D Human tatatgtta----cact B D Chimp tatatgtta----cact B D Tarsier tttaaattg----aagt B D Bushbaby attgagtta----aaat B D Alpaca ------att----gagt B D Dog ----atgtactcttagt B D Panda ----gtata----tagt B D Horse -------------tggt D Little brown bat ------ata----tatt B D Megabat ------gta----gatt B D Elephant attgagtta----aaat B D Sloth attgagata----aaat B D Pig ================= B D Manatee ----------------- B D Rabbit ================= B D Guinea pig ================= B D Cow ================= B D Rhesus ================= B D Gibbon ================= B D Orangutan ================= B D Gorilla ================= B D Naked mole-rat ================= B D Squirrel monkey ================= B D Marmoset ================= B D Dolphin ================= B D Shrew ================= B D Armadillo ================= B D Hedgehog ================= B D Mouse lemur ================= B D Wallaby ================= B D Cat ================= B D Kangaroo rat ================= B D Rock hyrax ================= B D Opossum ================= B D Lizard ================= B D Budgerigar ================= B D Tasmanian devil ================= B D Platypus ================= B D Zebrafish ================= B D Zebra finch ================= B D Baboon ================= B D Chicken ================= B D X. tropicalis ================= B D Coelacanth ================= B D Painted turtle ================= B D Turkey ================= Inserts between block 11 and 12 in window B D Tarsier 94bp Alignment block 12 of 114 in window, 37105558 - 37105564, 7 bps B D Mouse ttgcttg B D Rat ttgcttg B D Squirrel ttttttt B D Human tttattg B D Chimp tttattg B D Bushbaby ttacctg B D Alpaca taaaatt B D Dog taaaatt B D Panda tcatttt B D Horse gaggt-- D Little brown bat ttacttt B D Megabat ttacttt B D Elephant ttatata B D Sloth ttacata B D Pig ======= B D Manatee ------- B D Rabbit ======= B D Guinea pig ======= B D Cow ======= B D Rhesus ======= B D Gibbon ======= B D Orangutan ======= B D Gorilla ======= B D Naked mole-rat ======= B D Squirrel monkey ======= B D Marmoset ======= B D Dolphin ======= B D Shrew ======= B D Armadillo ======= B D Hedgehog ======= B D Tarsier ======= B D Mouse lemur ======= B D Wallaby ======= B D Cat ======= B D Kangaroo rat ======= B D Rock hyrax ======= B D Opossum ======= B D Lizard ======= B D Budgerigar ======= B D Tasmanian devil ======= B D Platypus ======= B D Zebrafish ======= B D Zebra finch ======= B D Baboon ======= B D Chicken ======= B D X. tropicalis ======= B D Coelacanth ======= B D Painted turtle ======= B D Turkey ======= Inserts between block 12 and 13 in window B D Human 3bp B D Chimp 57bp B D Alpaca 104bp B D Dog 3bp B D Panda 1bp B D Horse 6bp D Little brown bat 2bp B D Megabat 3bp Alignment block 13 of 114 in window, 37105565 - 37105567, 3 bps B D Mouse cag B D Rat cag B D Squirrel tgg B D Human caa B D Bushbaby ca- B D Elephant cag B D Pig === B D Manatee --- B D Rabbit === B D Guinea pig === B D Cow === B D Rhesus === B D Horse === B D Panda === B D Dog === B D Gibbon === B D Orangutan === B D Gorilla === B D Chimp === B D Naked mole-rat === B D Squirrel monkey === B D Marmoset === B D Alpaca === D Little brown bat === B D Dolphin === B D Megabat === B D Shrew === B D Armadillo === B D Sloth --- B D Hedgehog === B D Tarsier === B D Mouse lemur === B D Wallaby === B D Cat === B D Kangaroo rat === B D Rock hyrax === B D Opossum === B D Lizard === B D Budgerigar === B D Tasmanian devil === B D Platypus === B D Zebrafish === B D Zebra finch === B D Baboon === B D Chicken === B D X. tropicalis === B D Coelacanth === B D Painted turtle === B D Turkey === Inserts between block 13 and 14 in window B D Rat 1bp B D Elephant 38bp Alignment block 14 of 114 in window, 37105568 - 37105582, 15 bps B D Mouse gagctggtgagatgg B D Squirrel cag------------ B D Dog -atgtagtaaaatgg B D Manatee -atttggggagacag B D Sloth ----ttgtgaaatgt B D Pig =============== B D Rabbit =============== B D Elephant =============== B D Guinea pig =============== B D Cow =============== B D Rhesus =============== B D Horse =============== B D Panda =============== B D Bushbaby --------------- B D Gibbon =============== B D Orangutan =============== B D Gorilla =============== B D Chimp =============== B D Human --------------- B D Naked mole-rat =============== B D Squirrel monkey =============== B D Marmoset =============== B D Rat =============== B D Alpaca =============== D Little brown bat =============== B D Dolphin =============== B D Megabat =============== B D Shrew =============== B D Armadillo =============== B D Hedgehog =============== B D Tarsier =============== B D Mouse lemur =============== B D Wallaby =============== B D Cat =============== B D Kangaroo rat =============== B D Rock hyrax =============== B D Opossum =============== B D Lizard =============== B D Budgerigar =============== B D Tasmanian devil =============== B D Platypus =============== B D Zebrafish =============== B D Zebra finch =============== B D Baboon =============== B D Chicken =============== B D X. tropicalis =============== B D Coelacanth =============== B D Painted turtle =============== B D Turkey =============== Inserts between block 14 and 15 in window B D Dog 125bp B D Manatee 1bp B D Sloth 95bp Alignment block 15 of 114 in window, 37105583 - 37105604, 22 bps B D Mouse ctcagcgagtaagcactgactg- B D Squirrel -------agaatgcactgtaaa- B D Bushbaby -------------cattataca- B D Panda -----------tttagtgagtt- D Little brown bat -------------tagcaagtc- B D Megabat -------------tagtgagtt- B D Manatee --gtaggtgagtatattttactt B D Pig ======================= B D Rabbit ======================= B D Elephant ======================= B D Guinea pig ======================= B D Cow ======================= B D Rhesus ======================= B D Horse ======================= B D Dog ======================= B D Gibbon ======================= B D Orangutan ======================= B D Gorilla ======================= B D Chimp ======================= B D Human ----------------------- B D Naked mole-rat ======================= B D Squirrel monkey ======================= B D Marmoset ======================= B D Rat ======================= B D Alpaca ======================= B D Dolphin ======================= B D Shrew ======================= B D Armadillo ======================= B D Sloth ======================= B D Hedgehog ======================= B D Tarsier ======================= B D Mouse lemur ======================= B D Wallaby ======================= B D Cat ======================= B D Kangaroo rat ======================= B D Rock hyrax ======================= B D Opossum ======================= B D Lizard ======================= B D Budgerigar ======================= B D Tasmanian devil ======================= B D Platypus ======================= B D Zebrafish ======================= B D Zebra finch ======================= B D Baboon ======================= B D Chicken ======================= B D X. tropicalis ======================= B D Coelacanth ======================= B D Painted turtle ======================= B D Turkey ======================= Inserts between block 15 and 16 in window B D Panda 117bp D Little brown bat 2bp B D Megabat 2bp Alignment block 16 of 114 in window, 37105605 - 37105621, 17 bps B D Mouse atctcctgaaggttcaa B D Squirrel atttcatgagagttgat B D Bushbaby gtttcatgaa------- B D Horse attt------------- D Little brown bat agtt------------- B D Megabat gatt------------- B D Manatee -ttttattgagttaaa- B D Pig ================= B D Rabbit ================= B D Elephant ================= B D Guinea pig ================= B D Cow ================= B D Rhesus ================= B D Panda ================= B D Dog ================= B D Gibbon ================= B D Orangutan ================= B D Gorilla ================= B D Chimp ================= B D Human ----------------- B D Naked mole-rat ================= B D Squirrel monkey ================= B D Marmoset ================= B D Rat ================= B D Alpaca ================= B D Dolphin ================= B D Shrew ================= B D Armadillo ================= B D Sloth ================= B D Hedgehog ================= B D Tarsier ================= B D Mouse lemur ================= B D Wallaby ================= B D Cat ================= B D Kangaroo rat ================= B D Rock hyrax ================= B D Opossum ================= B D Lizard ================= B D Budgerigar ================= B D Tasmanian devil ================= B D Platypus ================= B D Zebrafish ================= B D Zebra finch ================= B D Baboon ================= B D Chicken ================= B D X. tropicalis ================= B D Coelacanth ================= B D Painted turtle ================= B D Turkey ================= Inserts between block 16 and 17 in window B D Squirrel 65bp Alignment block 17 of 114 in window, 37105622 - 37105641, 20 bps B D Mouse atcccagcagccacatggtg B D Manatee attt---------------- B D Pig ==================== B D Rabbit ==================== B D Elephant ==================== B D Guinea pig ==================== B D Cow ==================== B D Rhesus ==================== B D Squirrel ==================== B D Horse -------------------- B D Panda ==================== B D Bushbaby -------------------- B D Dog ==================== B D Gibbon ==================== B D Orangutan ==================== B D Gorilla ==================== B D Chimp ==================== B D Human -------------------- B D Naked mole-rat ==================== B D Squirrel monkey ==================== B D Marmoset ==================== B D Rat ==================== B D Alpaca ==================== D Little brown bat -------------------- B D Dolphin ==================== B D Megabat -------------------- B D Shrew ==================== B D Armadillo ==================== B D Sloth ==================== B D Hedgehog ==================== B D Tarsier ==================== B D Mouse lemur ==================== B D Wallaby ==================== B D Cat ==================== B D Kangaroo rat ==================== B D Rock hyrax ==================== B D Opossum ==================== B D Lizard ==================== B D Budgerigar ==================== B D Tasmanian devil ==================== B D Platypus ==================== B D Zebrafish ==================== B D Zebra finch ==================== B D Baboon ==================== B D Chicken ==================== B D X. tropicalis ==================== B D Coelacanth ==================== B D Painted turtle ==================== B D Turkey ==================== Alignment block 18 of 114 in window, 37105642 - 37105644, 3 bps B D Mouse gct B D Cow gtt B D Pig === B D Manatee --- B D Rabbit === B D Elephant === B D Guinea pig === B D Rhesus === B D Squirrel === B D Horse --- B D Panda === B D Bushbaby --- B D Dog === B D Gibbon === B D Orangutan === B D Gorilla === B D Chimp === B D Human --- B D Naked mole-rat === B D Squirrel monkey === B D Marmoset === B D Rat === B D Alpaca === D Little brown bat --- B D Dolphin === B D Megabat --- B D Shrew === B D Armadillo === B D Sloth === B D Hedgehog === B D Tarsier === B D Mouse lemur === B D Wallaby === B D Cat === B D Kangaroo rat === B D Rock hyrax === B D Opossum === B D Lizard === B D Budgerigar === B D Tasmanian devil === B D Platypus === B D Zebrafish === B D Zebra finch === B D Baboon === B D Chicken === B D X. tropicalis === B D Coelacanth === B D Painted turtle === B D Turkey === Alignment block 19 of 114 in window, 37105645 - 37105664, 20 bps B D Mouse cacaaccaccta---taatgata B D Gorilla caaaacttcttg---cagtgaaa B D Bushbaby ----ttttgata---tatttaat B D Cow tacatacacata---ta------ B D Horse ------tactttttctagtgagt D Little brown bat ------gacata---cagtgaaa B D Megabat ------tacatg---cag----- B D Manatee -------acata---cagtga-- B D Pig ======================= B D Rabbit ======================= B D Elephant ======================= B D Guinea pig ======================= B D Rhesus ======================= B D Squirrel ======================= B D Panda ======================= B D Dog ======================= B D Gibbon ======================= B D Orangutan ======================= B D Chimp ======================= B D Human ----------------------- B D Naked mole-rat ======================= B D Squirrel monkey ======================= B D Marmoset ======================= B D Rat ======================= B D Alpaca ======================= B D Dolphin ======================= B D Shrew ======================= B D Armadillo ======================= B D Sloth ======================= B D Hedgehog ======================= B D Tarsier ======================= B D Mouse lemur ======================= B D Wallaby ======================= B D Cat ======================= B D Kangaroo rat ======================= B D Rock hyrax ======================= B D Opossum ======================= B D Lizard ======================= B D Budgerigar ======================= B D Tasmanian devil ======================= B D Platypus ======================= B D Zebrafish ======================= B D Zebra finch ======================= B D Baboon ======================= B D Chicken ======================= B D X. tropicalis ======================= B D Coelacanth ======================= B D Painted turtle ======================= B D Turkey ======================= Inserts between block 19 and 20 in window B D Gorilla 7bp B D Bushbaby 1bp B D Horse 2bp B D Megabat 2bp Alignment block 20 of 114 in window, 37105665 - 37105672, 8 bps B D Mouse cctgatgc B D Rabbit cctcatgc D Little brown bat -----tgc B D Manatee ---aatgc B D Pig ======== B D Elephant ======== B D Guinea pig ======== B D Cow -------- B D Rhesus ======== B D Squirrel ======== B D Horse ======== B D Panda ======== B D Bushbaby ======== B D Dog ======== B D Gibbon ======== B D Orangutan ======== B D Gorilla ======== B D Chimp ======== B D Human -------- B D Naked mole-rat ======== B D Squirrel monkey ======== B D Marmoset ======== B D Rat ======== B D Alpaca ======== B D Dolphin ======== B D Megabat ======== B D Shrew ======== B D Armadillo ======== B D Sloth ======== B D Hedgehog ======== B D Tarsier ======== B D Mouse lemur ======== B D Wallaby ======== B D Cat ======== B D Kangaroo rat ======== B D Rock hyrax ======== B D Opossum ======== B D Lizard ======== B D Budgerigar ======== B D Tasmanian devil ======== B D Platypus ======== B D Zebrafish ======== B D Zebra finch ======== B D Baboon ======== B D Chicken ======== B D X. tropicalis ======== B D Coelacanth ======== B D Painted turtle ======== B D Turkey ======== Alignment block 21 of 114 in window, 37105673 - 37105703, 31 bps B D Mouse cctcttctggtgcgtctgaaggcagctccac B D Rabbit cctcc-ctcctgcccttgcacttgccctctc B D Pig ctttttgtagtgagtcagaa----------- D Little brown bat --actgacagtt------------------- B D Manatee ------------actgtacatccagttttat B D Elephant =============================== B D Guinea pig =============================== B D Cow ------------------------------- B D Rhesus =============================== B D Squirrel =============================== B D Horse =============================== B D Panda =============================== B D Bushbaby =============================== B D Dog =============================== B D Gibbon =============================== B D Orangutan =============================== B D Gorilla =============================== B D Chimp =============================== B D Human ------------------------------- B D Naked mole-rat =============================== B D Squirrel monkey =============================== B D Marmoset =============================== B D Rat =============================== B D Alpaca =============================== B D Dolphin =============================== B D Megabat =============================== B D Shrew =============================== B D Armadillo =============================== B D Sloth =============================== B D Hedgehog =============================== B D Tarsier =============================== B D Mouse lemur =============================== B D Wallaby =============================== B D Cat =============================== B D Kangaroo rat =============================== B D Rock hyrax =============================== B D Opossum =============================== B D Lizard =============================== B D Budgerigar =============================== B D Tasmanian devil =============================== B D Platypus =============================== B D Zebrafish =============================== B D Zebra finch =============================== B D Baboon =============================== B D Chicken =============================== B D X. tropicalis =============================== B D Coelacanth =============================== B D Painted turtle =============================== B D Turkey =============================== Inserts between block 21 and 22 in window D Little brown bat 12bp B D Manatee 15bp Alignment block 22 of 114 in window, 37105704 - 37105705, 2 bps B D Mouse tg B D Rabbit tg B D Elephant ta B D Manatee tg B D Pig -- B D Guinea pig == B D Cow -- B D Rhesus == B D Squirrel == B D Horse == B D Panda == B D Bushbaby == B D Dog == B D Gibbon == B D Orangutan == B D Gorilla == B D Chimp == B D Human -- B D Naked mole-rat == B D Squirrel monkey == B D Marmoset == B D Rat == B D Alpaca == D Little brown bat == B D Dolphin == B D Megabat == B D Shrew == B D Armadillo == B D Sloth == B D Hedgehog == B D Tarsier == B D Mouse lemur == B D Wallaby == B D Cat == B D Kangaroo rat == B D Rock hyrax == B D Opossum == B D Lizard == B D Budgerigar == B D Tasmanian devil == B D Platypus == B D Zebrafish == B D Zebra finch == B D Baboon == B D Chicken == B D X. tropicalis == B D Coelacanth == B D Painted turtle == B D Turkey == Alignment block 23 of 114 in window, 37105706 - 37105708, 3 bps B D Mouse tat B D Rabbit taa B D Chimp tat B D Gorilla tag B D Orangutan tat B D Pig t-- B D Dolphin t-- B D Elephant tat B D Manatee tat B D Armadillo tat B D Guinea pig === B D Cow --- B D Rhesus === B D Squirrel === B D Horse === B D Panda === B D Bushbaby === B D Dog === B D Gibbon === B D Human --- B D Naked mole-rat === B D Squirrel monkey === B D Marmoset === B D Rat === B D Alpaca === D Little brown bat === B D Megabat === B D Shrew === B D Sloth === B D Hedgehog === B D Tarsier === B D Mouse lemur === B D Wallaby === B D Cat === B D Kangaroo rat === B D Rock hyrax === B D Opossum === B D Lizard === B D Budgerigar === B D Tasmanian devil === B D Platypus === B D Zebrafish === B D Zebra finch === B D Baboon === B D Chicken === B D X. tropicalis === B D Coelacanth === B D Painted turtle === B D Turkey === Alignment block 24 of 114 in window, 37105709 - 37105732, 24 bps B D Mouse ttatgtataataataaatacatct B D Rabbit ctacttttca-aataaataaacct B D Chimp atttgtatacctatgtaaccatca B D Gorilla at---tatac-------agtttca B D Orangutan atttgtatacctatgtaaccatca B D Bushbaby -------tacctatgtaaccatca B D Pig --ttacatacaattaaatgcactg B D Dolphin --ttatatat------atatattt B D Cow -----------------tatattt B D Cat --atatatgt------atacacct B D Horse --aaatttgc------atacagtt D Little brown bat --acatatat------acatactt B D Megabat --gaatgcac-------------- B D Elephant acctgtgtaaccataaccccagtt B D Manatee acatctgtaaccatcaccccggtc B D Armadillo atctgtgcattgatcaccccactg B D Guinea pig ======================== B D Rhesus ======================== B D Squirrel ======================== B D Panda ======================== B D Dog ======================== B D Gibbon ======================== B D Human ------------------------ B D Naked mole-rat ======================== B D Squirrel monkey ======================== B D Marmoset ======================== B D Rat ======================== B D Alpaca ======================== B D Shrew ======================== B D Sloth ======================== B D Hedgehog ======================== B D Tarsier ======================== B D Mouse lemur ======================== B D Wallaby ======================== B D Kangaroo rat ======================== B D Rock hyrax ======================== B D Opossum ======================== B D Lizard ======================== B D Budgerigar ======================== B D Tasmanian devil ======================== B D Platypus ======================== B D Zebrafish ======================== B D Zebra finch ======================== B D Baboon ======================== B D Chicken ======================== B D X. tropicalis ======================== B D Coelacanth ======================== B D Painted turtle ======================== B D Turkey ======================== Alignment block 25 of 114 in window, 37105733 - 37105737, 5 bps B D Mouse tt-----aaa B D Naked mole-rat tt-----aaa B D Rabbit tt-----aaa B D Chimp tt-------- B D Gorilla ttaa------ B D Orangutan tt-------- B D Bushbaby tc--cca--- B D Pig -------taa B D Dolphin -------ata B D Cow -------gtg B D Cat -------gtg B D Horse -------gaa D Little brown bat -------gtg B D Megabat --------tg B D Elephant ------agaa B D Manatee ------agaa B D Armadillo ------aaaa B D Guinea pig ========== B D Rhesus ========== B D Squirrel ========== B D Panda ========== B D Dog ========== B D Gibbon ========== B D Human ---------- B D Squirrel monkey ========== B D Marmoset ========== B D Rat ========== B D Alpaca ========== B D Shrew ========== B D Sloth ========== B D Hedgehog ========== B D Tarsier ========== B D Mouse lemur ========== B D Wallaby ========== B D Kangaroo rat ========== B D Rock hyrax ========== B D Opossum ========== B D Lizard ========== B D Budgerigar ========== B D Tasmanian devil ========== B D Platypus ========== B D Zebrafish ========== B D Zebra finch ========== B D Baboon ========== B D Chicken ========== B D X. tropicalis ========== B D Coelacanth ========== B D Painted turtle ========== B D Turkey ========== Inserts between block 25 and 26 in window B D Rabbit 20bp B D Gorilla 2bp B D Pig 2bp B D Dolphin 2bp B D Cow 2bp B D Cat 2bp B D Horse 2bp D Little brown bat 2bp B D Megabat 1bp Alignment block 26 of 114 in window, 37105738 - 37105742, 5 bps B D Mouse gtttg B D Naked mole-rat atttg B D Rabbit ataag B D Human ---aa B D Bushbaby gtcaa B D Horse ---ca B D Pig ===== B D Manatee ----- B D Elephant ----- B D Guinea pig ===== B D Cow ===== B D Rhesus ===== B D Squirrel ===== B D Panda ===== B D Dog ===== B D Gibbon ===== B D Orangutan ----- B D Gorilla ===== B D Chimp ----- B D Squirrel monkey ===== B D Marmoset ===== B D Rat ===== B D Alpaca ===== D Little brown bat ===== B D Dolphin ===== B D Megabat ===== B D Shrew ===== B D Armadillo ----- B D Sloth ===== B D Hedgehog ===== B D Tarsier ===== B D Mouse lemur ===== B D Wallaby ===== B D Cat ===== B D Kangaroo rat ===== B D Rock hyrax ===== B D Opossum ===== B D Lizard ===== B D Budgerigar ===== B D Tasmanian devil ===== B D Platypus ===== B D Zebrafish ===== B D Zebra finch ===== B D Baboon ===== B D Chicken ===== B D X. tropicalis ===== B D Coelacanth ===== B D Painted turtle ===== B D Turkey ===== Inserts between block 26 and 27 in window B D Human 3bp B D Bushbaby 8bp B D Horse 2bp Alignment block 27 of 114 in window, 37105743 - 37105744, 2 bps B D Mouse ct B D Naked mole-rat gt B D Rabbit cg B D Human ct B D Chimp ct B D Orangutan ct B D Gibbon ct B D Pig == B D Manatee -- B D Elephant -- B D Guinea pig == B D Cow == B D Rhesus == B D Squirrel == B D Horse == B D Panda == B D Bushbaby == B D Dog == B D Gorilla == B D Squirrel monkey == B D Marmoset == B D Rat == B D Alpaca == D Little brown bat == B D Dolphin == B D Megabat == B D Shrew == B D Armadillo -- B D Sloth == B D Hedgehog == B D Tarsier == B D Mouse lemur == B D Wallaby == B D Cat == B D Kangaroo rat == B D Rock hyrax == B D Opossum == B D Lizard == B D Budgerigar == B D Tasmanian devil == B D Platypus == B D Zebrafish == B D Zebra finch == B D Baboon == B D Chicken == B D X. tropicalis == B D Coelacanth == B D Painted turtle == B D Turkey == Alignment block 28 of 114 in window, 37105745 - 37105749, 5 bps B D Mouse tgcag B D Naked mole-rat tgcag B D Rabbit tgcac B D Pig tttaa B D Dolphin tttat B D Cow tgta- B D Elephant tgcgg B D Manatee tgcag B D Armadillo tg-aa B D Guinea pig ===== B D Rhesus ===== B D Squirrel ===== B D Horse ===== B D Panda ===== B D Bushbaby ===== B D Dog ===== B D Gibbon ----- B D Orangutan ----- B D Gorilla ===== B D Chimp ----- B D Human ----- B D Squirrel monkey ===== B D Marmoset ===== B D Rat ===== B D Alpaca ===== D Little brown bat ===== B D Megabat ===== B D Shrew ===== B D Sloth ===== B D Hedgehog ===== B D Tarsier ===== B D Mouse lemur ===== B D Wallaby ===== B D Cat ===== B D Kangaroo rat ===== B D Rock hyrax ===== B D Opossum ===== B D Lizard ===== B D Budgerigar ===== B D Tasmanian devil ===== B D Platypus ===== B D Zebrafish ===== B D Zebra finch ===== B D Baboon ===== B D Chicken ===== B D X. tropicalis ===== B D Coelacanth ===== B D Painted turtle ===== B D Turkey ===== Inserts between block 28 and 29 in window B D Naked mole-rat 1bp B D Rabbit 24bp B D Cow 30bp Alignment block 29 of 114 in window, 37105750 - 37105757, 8 bps B D Mouse aggtgcag B D Rat ggatgcag B D Naked mole-rat gaaaatac B D Rabbit agagggtg B D Human ------tg B D Chimp ------ag B D Orangutan ------ag B D Gibbon ------ag B D Pig ------tg B D Dolphin ------tt B D Elephant -------g B D Manatee -------g B D Armadillo -------g B D Guinea pig ======== B D Cow ======== B D Rhesus ======== B D Squirrel ======== B D Horse ======== B D Panda ======== B D Bushbaby ======== B D Dog ======== B D Gorilla ======== B D Squirrel monkey ======== B D Marmoset ======== B D Alpaca ======== D Little brown bat ======== B D Megabat ======== B D Shrew ======== B D Sloth ======== B D Hedgehog ======== B D Tarsier ======== B D Mouse lemur ======== B D Wallaby ======== B D Cat ======== B D Kangaroo rat ======== B D Rock hyrax ======== B D Opossum ======== B D Lizard ======== B D Budgerigar ======== B D Tasmanian devil ======== B D Platypus ======== B D Zebrafish ======== B D Zebra finch ======== B D Baboon ======== B D Chicken ======== B D X. tropicalis ======== B D Coelacanth ======== B D Painted turtle ======== B D Turkey ======== Inserts between block 29 and 30 in window B D Human 38bp B D Chimp 27bp B D Orangutan 27bp B D Gibbon 27bp B D Pig 6bp B D Dolphin 6bp Alignment block 30 of 114 in window, 37105758 - 37105758, 1 bps B D Mouse t B D Rat t B D Naked mole-rat t B D Rabbit t B D Human t B D Gorilla t B D Marmoset t B D Squirrel monkey t B D Pig t B D Dolphin t B D Manatee - B D Elephant - B D Guinea pig = B D Cow = B D Rhesus = B D Squirrel = B D Horse = B D Panda = B D Bushbaby = B D Dog = B D Gibbon = B D Orangutan = B D Chimp = B D Alpaca = D Little brown bat = B D Megabat = B D Shrew = B D Armadillo - B D Sloth = B D Hedgehog = B D Tarsier = B D Mouse lemur = B D Wallaby = B D Cat = B D Kangaroo rat = B D Rock hyrax = B D Opossum = B D Lizard = B D Budgerigar = B D Tasmanian devil = B D Platypus = B D Zebrafish = B D Zebra finch = B D Baboon = B D Chicken = B D X. tropicalis = B D Coelacanth = B D Painted turtle = B D Turkey = Inserts between block 30 and 31 in window B D Pig 15bp B D Dolphin 30bp Alignment block 31 of 114 in window, 37105759 - 37105762, 4 bps B D Mouse gtac B D Rat gtac B D Naked mole-rat gtac B D Rabbit gtat B D Human tgat B D Gorilla tgat B D Marmoset gtac B D Squirrel monkey gtac B D Bushbaby --at B D Cat --ac B D Horse gtac D Little brown bat --ac B D Megabat --ac B D Elephant --ac B D Manatee --at B D Armadillo --ac B D Pig ==== B D Guinea pig ==== B D Cow ==== B D Rhesus ==== B D Squirrel ==== B D Panda ==== B D Dog ==== B D Gibbon ==== B D Orangutan ==== B D Chimp ==== B D Alpaca ==== B D Dolphin ==== B D Shrew ==== B D Sloth ==== B D Hedgehog ==== B D Tarsier ==== B D Mouse lemur ==== B D Wallaby ==== B D Kangaroo rat ==== B D Rock hyrax ==== B D Opossum ==== B D Lizard ==== B D Budgerigar ==== B D Tasmanian devil ==== B D Platypus ==== B D Zebrafish ==== B D Zebra finch ==== B D Baboon ==== B D Chicken ==== B D X. tropicalis ==== B D Coelacanth ==== B D Painted turtle ==== B D Turkey ==== Inserts between block 31 and 32 in window B D Marmoset 18bp B D Squirrel monkey 18bp B D Cat 5bp B D Horse 3bp D Little brown bat 3bp B D Megabat 3bp Alignment block 32 of 114 in window, 37105763 - 37105768, 6 bps B D Mouse attttc B D Rat agtttc B D Naked mole-rat cattgc B D Rabbit ttgttc B D Human atattt B D Gorilla attttt B D Rhesus atattc B D Baboon atattc B D Marmoset atatgt B D Squirrel monkey atatgt B D Bushbaby attttc B D Pig ---ctt B D Dolphin ---gtc B D Cow ---gtc B D Cat ---ctc B D Horse ---ttc D Little brown bat ---cac B D Megabat ---ttc B D Elephant atttcc B D Manatee atttcc B D Armadillo atttct B D Guinea pig ====== B D Squirrel ====== B D Panda ====== B D Dog ====== B D Gibbon ====== B D Orangutan ====== B D Chimp ====== B D Alpaca ====== B D Shrew ====== B D Sloth ====== B D Hedgehog ====== B D Tarsier ====== B D Mouse lemur ====== B D Wallaby ====== B D Kangaroo rat ====== B D Rock hyrax ====== B D Opossum ====== B D Lizard ====== B D Budgerigar ====== B D Tasmanian devil ====== B D Platypus ====== B D Zebrafish ====== B D Zebra finch ====== B D Chicken ====== B D X. tropicalis ====== B D Coelacanth ====== B D Painted turtle ====== B D Turkey ====== Inserts between block 32 and 33 in window B D Pig 3bp B D Dolphin 3bp B D Cow 3bp B D Cat 3bp B D Horse 3bp D Little brown bat 3bp B D Megabat 3bp Alignment block 33 of 114 in window, 37105769 - 37105778, 10 bps B D Mouse a----------------------------------------gatttgatc---- B D Rat a----------------------------------------gatttgatc---- B D Naked mole-rat atga------------------------------------gaagttcatt---- B D Squirrel ------------------------------------------agataatt---- B D Rabbit -tgagtgactatatagtgaaatatgctgtatagttttgtggattttgata---- B D Human -----------------------------------------------gta---- B D Gorilla -----------------------------------------------gta---- B D Rhesus -----------------------------------------------ata---- B D Baboon -----------------------------------------------ata---- B D Marmoset -----------------------------------------------gta---- B D Squirrel monkey -----------------------------------------------gta---- B D Bushbaby -----------------------------------------------atc---- B D Pig -----------------------------------------------aac---- B D Dolphin -----------------------------------------------ata---- B D Cow -----------------------------------------------att---- B D Cat -----------------------------------------------agt---- B D Horse -----------------------------------------------agt---- D Little brown bat -----------------------------------------------agt---- B D Megabat -----------------------------------------------agt---- B D Elephant -----------------------------------------------atcatcc B D Manatee -----------------------------------------------atcatcc B D Armadillo -----------------------------------------------gtcttgc B D Guinea pig ====================================================== B D Panda ====================================================== B D Dog ====================================================== B D Gibbon ====================================================== B D Orangutan ====================================================== B D Chimp ====================================================== B D Alpaca ====================================================== B D Shrew ====================================================== B D Sloth ====================================================== B D Hedgehog ====================================================== B D Tarsier ====================================================== B D Mouse lemur ====================================================== B D Wallaby ====================================================== B D Kangaroo rat ====================================================== B D Rock hyrax ====================================================== B D Opossum ====================================================== B D Lizard ====================================================== B D Budgerigar ====================================================== B D Tasmanian devil ====================================================== B D Platypus ====================================================== B D Zebrafish ====================================================== B D Zebra finch ====================================================== B D Chicken ====================================================== B D X. tropicalis ====================================================== B D Coelacanth ====================================================== B D Painted turtle ====================================================== B D Turkey ====================================================== Inserts between block 33 and 34 in window B D Human 4bp B D Gorilla 4bp B D Rhesus 4bp B D Baboon 4bp B D Marmoset 4bp B D Squirrel monkey 4bp B D Bushbaby 3bp B D Pig 7bp B D Dolphin 7bp B D Cow 7bp B D Cat 8bp B D Horse 7bp D Little brown bat 7bp B D Megabat 7bp Alignment block 34 of 114 in window, 37105779 - 37105780, 2 bps B D Mouse ca B D Rat ca B D Naked mole-rat ta B D Squirrel tc B D Rabbit ta B D Elephant cc B D Manatee ca B D Armadillo ca B D Pig == B D Guinea pig == B D Cow == B D Rhesus == B D Horse == B D Panda == B D Bushbaby == B D Dog == B D Gibbon == B D Orangutan == B D Gorilla == B D Chimp == B D Human == B D Squirrel monkey == B D Marmoset == B D Alpaca == D Little brown bat == B D Dolphin == B D Megabat == B D Shrew == B D Sloth == B D Hedgehog == B D Tarsier == B D Mouse lemur == B D Wallaby == B D Cat == B D Kangaroo rat == B D Rock hyrax == B D Opossum == B D Lizard == B D Budgerigar == B D Tasmanian devil == B D Platypus == B D Zebrafish == B D Zebra finch == B D Baboon == B D Chicken == B D X. tropicalis == B D Coelacanth == B D Painted turtle == B D Turkey == Inserts between block 34 and 35 in window B D Elephant 3bp B D Manatee 3bp B D Armadillo 13bp Alignment block 35 of 114 in window, 37105781 - 37105816, 36 bps B D Mouse tgtctccttc-atgtcacctac----tgctctag-----------------tcaa-----aac B D Rat tgtgtccctc--tgtcacctat----tgctctag-----------------tcac-----aac B D Naked mole-rat tgtatatacccatgtaac--at----caccctta-----------------tcaa-----agt B D Squirrel tatgctccct-------------------tccag-----------------tca--------- B D Rabbit tgtatatgcctgtgtaat-gac----cactgcag-----------------tcca-----aag B D Human ----------tatgtaac-cat----cattctag-----------------tcaa-----aat B D Gorilla ----------tatgtaac-cgt----cattctag-----------------tcaa-----aat B D Rhesus ----------tatgtaac-cat----cattttag-----------------tcaa-----aat B D Baboon ----------tatgtaac-cat----cattttag-----------------tcaa-----aat B D Marmoset ----------tctgtaac-cat----cactctag-----------------tcaa-----aat B D Squirrel monkey ----------tgtgtaac-cat----cactctag-----------------tcaa-----aat B D Tarsier ----------catatttc-cat----catttca------------------------------ B D Bushbaby ----------------ca-ccc----ccttctag-----------------ttaattcctgat B D Pig --------------cttt-ctt----catctcag-------------------aa-----aa- B D Alpaca --------------tttt-cat----catctcag-------------------aa-----aa- B D Dolphin --------------tttt-ctt----catttcag-------------------aa-----aa- B D Cow --------------cttt-ctt----catctcaa-------------------aa-----aa- B D Cat --------------tttt-cat--------------------cagttccagaaaa-----tat B D Horse --------------tatg-tat---atacctctg--taactaccacttcagtcaa-----aat D Little brown bat --------------cagg-acatttttatctcag-------------------aa-----aat B D Megabat --------------tatg-tattgtacacacctgtataaccatcacaccagtcaa-----aat B D Elephant ------tgtattttcatt-cct----gcttctag-----------------ttaa-----tgc B D Manatee ------tgtatcttcatg-cct----tcttccag-----------------ttaa-----ccc B D Armadillo ----------------tg-tta----ccttccag-----------------taaa-----tta B D Sloth ----------------tg-tcc----ccttccat-----------------ttaa-----ttt B D Guinea pig =============================================================== B D Panda =============================================================== B D Dog =============================================================== B D Gibbon =============================================================== B D Orangutan =============================================================== B D Chimp =============================================================== B D Shrew =============================================================== B D Hedgehog =============================================================== B D Mouse lemur =============================================================== B D Wallaby =============================================================== B D Kangaroo rat =============================================================== B D Rock hyrax =============================================================== B D Opossum =============================================================== B D Lizard =============================================================== B D Budgerigar =============================================================== B D Tasmanian devil =============================================================== B D Platypus =============================================================== B D Zebrafish =============================================================== B D Zebra finch =============================================================== B D Chicken =============================================================== B D X. tropicalis =============================================================== B D Coelacanth =============================================================== B D Painted turtle =============================================================== B D Turkey =============================================================== Inserts between block 35 and 36 in window B D Naked mole-rat 2bp B D Squirrel 1bp B D Rabbit 31bp B D Tarsier 18bp B D Pig 6bp B D Alpaca 6bp B D Dolphin 6bp B D Cow 6bp B D Cat 3bp B D Horse 70bp D Little brown bat 5bp B D Megabat 13bp Alignment block 36 of 114 in window, 37105817 - 37105824, 8 bps B D Mouse tcaatggt------ B D Rat tcagtggt------ B D Kangaroo rat tccatgtt------ B D Naked mole-rat tacattgt------ B D Squirrel tccaagg------- B D Rabbit tgcatgtc------ B D Human -----gc------- B D Gorilla -----gc------- B D Rhesus -----gc------- B D Baboon -----gc------- B D Marmoset -----gc------- B D Squirrel monkey -----cc------- B D Tree shrew tccatgc------- B D Pig tg------------ B D Alpaca ta------------ B D Dolphin tt------------ B D Cow ta------------ B D Cat tc------------ B D Panda tg------------ D Little brown bat tg------------ B D Megabat tc------------ B D Elephant -------ctagtag B D Manatee -------ctagtag B D Armadillo -------ctagtag B D Sloth -------ttactag B D Guinea pig ============== B D Horse ============== B D Bushbaby -------------- B D Dog ============== B D Gibbon ============== B D Orangutan ============== B D Chimp ============== B D Shrew ============== B D Hedgehog ============== B D Tarsier ============== B D Mouse lemur ============== B D Wallaby ============== B D Rock hyrax ============== B D Opossum ============== B D Lizard ============== B D Budgerigar ============== B D Tasmanian devil ============== B D Platypus ============== B D Zebrafish ============== B D Zebra finch ============== B D Chicken ============== B D X. tropicalis ============== B D Coelacanth ============== B D Painted turtle ============== B D Turkey ============== Inserts between block 36 and 37 in window B D Human 18bp B D Gorilla 18bp B D Rhesus 18bp B D Baboon 18bp B D Marmoset 18bp B D Squirrel monkey 18bp B D Tree shrew 1bp B D Pig 4bp B D Alpaca 4bp B D Dolphin 4bp B D Cow 4bp B D Cat 4bp B D Panda 4bp D Little brown bat 4bp B D Megabat 23bp Alignment block 37 of 114 in window, 37105825 - 37105841, 17 bps B D Mouse tgtcctcatt------------------------------caagcat B D Rat tgtcatcacttcagagggcgtttccatgccacctttcaggcaagcat B D Kangaroo rat cctttcccgt------------------------------cagtcgt B D Naked mole-rat tatcatcc--------------------------------cag---- B D Rabbit cctttccagt------------------------------cag---- B D Human catttccagt------------------------------gaatccc B D Chimp catttccagt------------------------------gaatccc B D Gorilla catttccggt------------------------------gaatccc B D Orangutan cacttccagt------------------------------gaatccc B D Gibbon cacttccagt------------------------------gaatccc B D Rhesus cacttccagt------------------------------caatccc B D Baboon cacttccagt------------------------------caatccc B D Marmoset tacttccagt------------------------------cagtc-- B D Squirrel monkey cacttccagt------------------------------cagtcct B D Tarsier cccttccagt------------------------------taatccc B D Mouse lemur cccttccagt------------------------------taatccc B D Tree shrew -tctttccgt------------------------------caattct B D Pig ctcttctggt------------------------------caagccc B D Alpaca ctcatgtagt------------------------------caatccc B D Dolphin ctcttctagt------------------------------caatcct B D Cow ctcatctagt------------------------------caatccc B D Cat tttttccagt------------------------------caattc- B D Panda tttttccagt------------------------------caattc- D Little brown bat cccttctgga------------------------------cagttct B D Megabat ctcttccagt------------------------------cagtccc B D Manatee ----------------------------------------------- B D Elephant ----------------------------------------------- B D Guinea pig =============================================== B D Squirrel ----------------------------------------------- B D Horse =============================================== B D Bushbaby ----------------------------------------------- B D Dog =============================================== B D Shrew =============================================== B D Armadillo ----------------------------------------------- B D Sloth ----------------------------------------------- B D Hedgehog =============================================== B D Wallaby =============================================== B D Rock hyrax =============================================== B D Opossum =============================================== B D Lizard =============================================== B D Budgerigar =============================================== B D Tasmanian devil =============================================== B D Platypus =============================================== B D Zebrafish =============================================== B D Zebra finch =============================================== B D Chicken =============================================== B D X. tropicalis =============================================== B D Coelacanth =============================================== B D Painted turtle =============================================== B D Turkey =============================================== Inserts between block 37 and 38 in window B D Rabbit 5bp B D Human 1bp B D Chimp 1bp B D Gorilla 1bp B D Orangutan 1bp B D Gibbon 1bp B D Rhesus 1bp B D Baboon 1bp B D Squirrel monkey 1bp B D Tarsier 1bp B D Mouse lemur 1bp B D Tree shrew 1bp B D Pig 1bp B D Alpaca 1bp B D Dolphin 1bp B D Cow 1bp B D Cat 1bp B D Panda 1bp D Little brown bat 1bp B D Megabat 1bp Alignment block 38 of 114 in window, 37105842 - 37105843, 2 bps B D Mouse gg B D Rat gg B D Kangaroo rat ag B D Rabbit gg B D Pika gg B D Human ca B D Chimp ca B D Gorilla ca B D Orangutan ca B D Gibbon ca B D Rhesus ta B D Baboon ta B D Squirrel monkey ca B D Tarsier ga B D Mouse lemur gg B D Tree shrew gg B D Pig gt B D Alpaca gg B D Dolphin gg B D Cow gg B D Cat gg B D Panda gg D Little brown bat ag B D Megabat gg B D Manatee -- B D Elephant -- B D Guinea pig == B D Squirrel -- B D Horse == B D Bushbaby -- B D Dog == B D Naked mole-rat -- B D Marmoset -- B D Shrew == B D Armadillo -- B D Sloth -- B D Hedgehog == B D Wallaby == B D Rock hyrax == B D Opossum == B D Lizard == B D Budgerigar == B D Tasmanian devil == B D Platypus == B D Zebrafish == B D Zebra finch == B D Chicken == B D X. tropicalis == B D Coelacanth == B D Painted turtle == B D Turkey == Alignment block 39 of 114 in window, 37105844 - 37105845, 2 bps B D Mouse ga B D Rat ga B D Kangaroo rat ca B D Naked mole-rat -a B D Guinea pig ga B D Squirrel ga B D Rabbit ta B D Pika ta B D Human ta B D Chimp ta B D Gorilla ta B D Orangutan ta B D Gibbon ta B D Rhesus ta B D Baboon ta B D Squirrel monkey ta B D Tarsier ta B D Mouse lemur ta B D Bushbaby -a B D Tree shrew ta B D Pig ta B D Alpaca ta B D Dolphin ta B D Cow ta B D Cat ta B D Panda ta D Little brown bat ta B D Megabat ta B D Manatee -- B D Elephant -- B D Horse == B D Dog == B D Marmoset -- B D Shrew == B D Armadillo -- B D Sloth -- B D Hedgehog == B D Wallaby == B D Rock hyrax == B D Opossum == B D Lizard == B D Budgerigar == B D Tasmanian devil == B D Platypus == B D Zebrafish == B D Zebra finch == B D Chicken == B D X. tropicalis == B D Coelacanth == B D Painted turtle == B D Turkey == Alignment block 40 of 114 in window, 37105846 - 37105854, 9 bps B D Mouse aattcactg B D Rat gaatcactg B D Kangaroo rat gaatca--- B D Naked mole-rat aagtatttc B D Guinea pig aagtatttc B D Squirrel gaaccactt B D Rabbit gaatcactg B D Pika aaatcactg B D Human gaactgctg B D Chimp gaacagctg B D Gorilla gaaccactg B D Orangutan gaaccactg B D Gibbon caaccactg B D Rhesus gaaccactg B D Baboon gaaccactg B D Marmoset ---ccactg B D Squirrel monkey gaaccactg B D Tarsier gaaccacta B D Mouse lemur gaagcactg B D Bushbaby aaaccactg B D Tree shrew gaaccacta B D Pig gaaccactc B D Alpaca gaaccaatg B D Dolphin gaaccactg B D Cow gaatcacta B D Cat aaaccgttg B D Panda caaccactg D Little brown bat gaaccacta B D Megabat taaccactg B D Elephant -aaccactg B D Manatee -aaccactg B D Armadillo -aatcactg B D Sloth -aatcactg B D Medaka aattcatcg B D Horse ========= B D Dog ========= B D Shrew ========= B D Hedgehog ========= B D Wallaby ========= B D Rock hyrax ========= B D Opossum ========= B D Lizard ========= B D Budgerigar ========= B D Tasmanian devil ========= B D Platypus ========= B D Zebrafish ========= B D Zebra finch ========= B D Chicken ========= B D X. tropicalis ========= B D Coelacanth ========= B D Painted turtle ========= B D Turkey ========= Inserts between block 40 and 41 in window B D Tarsier 1bp B D Tree shrew 1bp Alignment block 41 of 114 in window, 37105855 - 37105856, 2 bps B D Mouse ct- B D Rat ct- B D Kangaroo rat ct- B D Naked mole-rat ca- B D Guinea pig ca- B D Squirrel tt- B D Rabbit tt- B D Pika tt- B D Human tt- B D Chimp tt- B D Gorilla tt- B D Orangutan tt- B D Gibbon tt- B D Rhesus tt- B D Baboon tt- B D Marmoset tt- B D Squirrel monkey tt- B D Tarsier tt- B D Mouse lemur tt- B D Bushbaby tt- B D Tree shrew tt- B D Pig tt- B D Alpaca tt- B D Dolphin tt- B D Cow tc- B D Cat tt- B D Dog tt- B D Panda tt- D Little brown bat tt- B D Megabat tt- B D Elephant tt- B D Manatee gt- B D Armadillo tt- B D Sloth tt- B D Medaka -ca B D Horse === B D Shrew === B D Hedgehog === B D Wallaby === B D Rock hyrax === B D Opossum === B D Lizard === B D Budgerigar === B D Tasmanian devil === B D Platypus === B D Zebrafish === B D Zebra finch === B D Chicken === B D X. tropicalis === B D Coelacanth === B D Painted turtle === B D Turkey === Inserts between block 41 and 42 in window B D Bushbaby 1bp B D Pig 1bp B D Alpaca 1bp B D Dolphin 1bp B D Cow 1bp B D Cat 1bp B D Dog 1bp B D Panda 1bp D Little brown bat 1bp B D Megabat 1bp Alignment block 42 of 114 in window, 37105857 - 37105888, 32 bps B D Mouse tca-------atttat------attacca-tag-tttagttttactt B D Rat tca-------gtttga------atcacca-ttg-tttagtgttactt B D Kangaroo rat taa-------aaatat------atcaccg-ta--cataactttgctt B D Naked mole-rat tta-------attgat------atcactg-tag-attaattttgctt B D Guinea pig tta-------attgga------attattg-tag-attaattttattt B D Squirrel tc---------tttta------atcatcc-tagtattaattttactt B D Rabbit tgt-------atttat------ataactg-tag-attaatttttctt B D Pika -----------tttgt------ataac---tag-attaattttgctt B D Human ta--------atttgt------atcatca-tag-gttaattttgctt B D Chimp ta--------atttgt------atcatca-tag-attaattttgctt B D Gorilla ta--------atttgt------atcatca-tag-attaattttgctt B D Orangutan ta--------atttgt------atcatca-tag-attaattttgctt B D Gibbon ta--------atttgt------atcatca-tag-attaattttgctt B D Rhesus ta--------atctgt------atcatca-tag-attaattttgttt B D Baboon ta--------atctgt------atcatca-tag-attaattttgttt B D Marmoset ta--------atttgt------atcacca-tag-attaattttgctt B D Squirrel monkey ta--------atttgt------atcacca-tag-attaattttgctt B D Tarsier ta--------atttgt------atagcca-cag-attcattttggtt B D Mouse lemur taattt----atttgt------gtcacca-cag-ataaaatattctt B D Bushbaby taattt----attttt------attatca-tag-ataaattttgctt B D Tree shrew ta--------atttgt------atcacca-tag-attaattttactt B D Pig ta--------atttgg------atcacca-tgg-attaattttgcct B D Alpaca ta--------ctttgg------atcacca-tag-attaattttgcct B D Dolphin ta--------atttgg------atcacca-tag-attaattttgctt B D Sheep ta--------atttgg------atcacta-tag-attaattttgcct B D Cow ta--------atttgg------atcatta-tag-attaattttgcct B D Cat ta--------atttgg------atcaaaa-taa-attaattttgctt B D Dog ta--------atttgg------atcaata-tag-attaattttgctt B D Panda ta--------atttgg------atcagca-tag-attaattttgctt D Little brown bat ta--------atttga------atcacca-tag-gttaattttactt B D Megabat ta--------atttgg------atcacca-tag-attacttttgctt B D Elephant ----ct----attcta------atcacca-tag-attaattttgttt B D Manatee ----ctaa--attcta------atcacca-tag-attaattttgttt B D Armadillo ----ctga---tttgt------atcactgctag-gttaattttcctt B D Sloth ----ttga--ttttat------atcactgctag-attaattttgctt B D Medaka ---tttgacaatttgtcatttgaaaacaa-tta-tgtaaatttactt B D Horse =============================================== B D Shrew =============================================== B D Hedgehog =============================================== B D Wallaby =============================================== B D Rock hyrax =============================================== B D Opossum =============================================== B D Lizard =============================================== B D Budgerigar =============================================== B D Tasmanian devil =============================================== B D Platypus =============================================== B D Zebrafish =============================================== B D Zebra finch =============================================== B D Chicken =============================================== B D X. tropicalis =============================================== B D Coelacanth =============================================== B D Painted turtle =============================================== B D Turkey =============================================== Alignment block 43 of 114 in window, 37105889 - 37105928, 40 bps B D Mouse caaataacaaaattattcaaataacaaacat--tcaatttta---- B D Rat caaataataaaaatattaaatt------cat--tgtgtttta---- B D Kangaroo rat caaagaacagctgtgttcaaactatca-catcatctgtatta---- B D Naked mole-rat taaaaaagagaaatgtaccaactatcagtct--------tta---- B D Guinea pig taaaaaggagaaatgtaccaactatcagtct--tatatatta---- B D Squirrel caaaaaatggaaatatcccaaatatcaatct--tctgcttt----- B D Rabbit caaa---tagaagtgttccaaatatcaaatt--tatacatta---- B D Pika caaa---tagaaatgttccaaatatcaaacg--tacacatta---- B D Human catacaatagaaatgttccaag-gtcaatct--tctacatta---- B D Chimp catacaatagaaatgttccaag-gtcaatct--tctacatta---- B D Gorilla catacaatagaaatgtgccaag-gtcaatct--tctacatta---- B D Orangutan catacaatagaaatgttccaag-gtcaatct--tctatatta---- B D Gibbon catacaatagaaatgttccaag-gtcaatct--tctgcagta---- B D Rhesus catacaatagaaatgttccaag-gtctatct--tctgcatta---- B D Baboon catacaatagaaatgttccaag-gtctatct--tctgcatta---- B D Marmoset caaacaacagaaatgttccaag-gtcaatct--tctgcatta---- B D Squirrel monkey caaacaatagaaatgttccaag-gtcaatct--tctgcatta---- B D Tarsier caaatagtaaaaatgtttcaagtatcagtct--tctgcatta---- B D Mouse lemur caaacaaaagaaatattccaaatatcaatct--tctgcatta---- B D Bushbaby caaacagtagaaatatttcaaatatcagtct--tctgcatta---- B D Tree shrew caaacaatagaaatgttgtaaatataactct--tctgcatta---- B D Pig caaacaatagaattgttccaaatatccat-t--tctacttta---- B D Alpaca caaacaatagaaatgttccagatatccatct--tctgcttta---- B D Dolphin caaacaaaagaaatgttccaaatatccatcc--tctgcttta---- B D Sheep caaacagtagaaatgttccaaatatccatct--tttgcttta---- B D Cow caaacagtagaaattttccaaatatccatat--ttttcttta---- B D Cat caaacaata-aaatgctcca-atgtccatct--tct---tta---- B D Dog caaacagta-aaatgttcca-gt----atct--gct---tta---- B D Panda caaacaata-aaatgttcca-gtatccatct--tct---ttc---- D Little brown bat taagcaataaaaatttaccaaatatccatct--tctac-ttc---- B D Megabat caaacaatagaaatgttccacatatccagct--tctgc-tta---- B D Elephant taaacaatagaaatactccagatatcaacct--tctgcttta---- B D Tenrec caaacagta-aaatgccccaaatagtaacct--tctgcttta---- B D Manatee taaacgatagaaatactccagatatcaacct--tctgcttta---- B D Armadillo caaaaaatagtatt--ttcaagcatcagtct--tctgctgta---- B D Sloth cagaaaatagtggt--ttcaaacatcgttct--tctgcttca---- B D Medaka ---ttaata--aatcatccaagtttctatca--taaaagtgaattc B D Horse ============================================== B D Shrew ============================================== B D Hedgehog ============================================== B D Wallaby ============================================== B D Rock hyrax ============================================== B D Opossum ============================================== B D Lizard ============================================== B D Budgerigar ============================================== B D Tasmanian devil ============================================== B D Platypus ============================================== B D Zebrafish ============================================== B D Zebra finch ============================================== B D Chicken ============================================== B D X. tropicalis ============================================== B D Coelacanth ============================================== B D Painted turtle ============================================== B D Turkey ============================================== Alignment block 44 of 114 in window, 37105929 - 37106036, 108 bps B D Mouse acttttgatgtagtatagt--aa--------cagg---ttaa----------------------tt---- B D Rat actttgggtgtagtacaat--aa--------caag---ttaa----------------------at---- B D Kangaroo rat atttttgacacaatactat--aa--------caag---ttaa----------------------ac---- B D Naked mole-rat atttttgatgtaatattat--aa--------taacaaactaggata---------------aa-tt---- B D Guinea pig atttttgatgtaacactat--aa--------taat---tcaagata---------------aattt---- B D Squirrel atttttaatataatactat--aatttacagctaat---ttaag---------------------ag---- B D Rabbit ----------tgatactgt--aactt-----caaa---taaaattg---------------aa--t---- B D Pika gctttt-atgtagtactataaaatgt-----taac---tgaaattt---------------aaatt---- B D Human atttttgatgcaatacta---aa--------taat---ttaaaatgtaat------ttaagaaatt---- B D Chimp atttttgatgcaatacta---aa--------taat---ttaaaatgtaat------ttaagaaatt---- B D Gorilla atttttgatgcaatacta---aa--------taat---ttaaaatgtaat------ttaagaaatt---- B D Orangutan atttttgatgcaatacta---aa--------taat---ttaaaatgtaat------ttaagaaatt---- B D Gibbon atttttgatgcaatacta---aa--------taat---ttaaaatgtaat------ttaagaaatt---- B D Rhesus atttttgatgcaatacta---aa--------taat---ttaaaacgtaat------gtaagaaatt---- B D Baboon atttttgatacaatacta---aa--------taat---ttaaaacgtaat------gtaagaaatt---- B D Marmoset atttttgatacaatacaa---aa--------taat---ttaaaatgtgat------ttgagaaatt---- B D Squirrel monkey atttttgatacaatacta---aa--------taat---ttaaaatgtaat------ttaagaaatt---- B D Tarsier atttttgatatgatattat--aa--------taat---ttaaactg-----------taagaaatt---- B D Mouse lemur atttttgatattctactgt--aa--------taat---ttaaacta------------aagaaatt---- B D Bushbaby agttttgatacactactat--ga--------taag---ttaaacta-----------taaaaggtt---- B D Tree shrew atttttgatgcactaccat--aa--------tatc---ttaaactataat------ttaaaaattc---- B D Pig att-ttaatgcaatatttt--ga--------taaa---tta-----taattttat-aaaagaaatt---- B D Alpaca ctttttaatgtaatactct--ga--------taac---ttaaattgtaattttat-taa--aaact---- B D Dolphin atttttaatgcagtactct--ga--------taac---ttaaactataatttcat-aaaagaaatt---- B D Sheep attcttaatgtaatactct--ga--------taac---atacac--taattttat-aaaagaaatt---- B D Cow attcttaatgtaatactct--ga--------taac---atacac--taattttat-aaaagaaatt---- B D Cat atttttaatgcaacactat--ag--------taac---taaaactgcaatttaataaaaagaaata---- B D Dog atttttaatgcaacact-----a--------taat---ttaaactgtaat----------aaaatt---- B D Panda atttttaatgcaacactat--aa--------taat---ttaagctgtaatttaat-aaaagaaatt---- D Little brown bat aattttaatttgacactat--aa--------taac---ttaaaatgtaatttcat-taaagaaatg---- B D Megabat attttcagtgcaacactat--at--------taac---ttaaactgtaatttcat-taaaaaaatt---- B D Elephant atttttaatgcagaactat--aa--------tac----ttaaactataattttat-aaaagaaatt---- B D Tenrec attattaatgtagaagtat--aa--------aac----ttaaactgaaatgttat-taaagaaatg---- B D Manatee attattaatgcaggagtgt--aa--------tac----ttaaactgtaattttat-aaaagaaatt---- B D Armadillo gtttttaatgcaatatagt--aa--------tgct---ttaaactgtaattttat-aaaggaaatt---- B D Sloth atttctaatgcaatactat--aa--------tgct---tta