NCBI Genes from NC_045512.2 (ORF1a)
Item: ORF1a
Score: 0
Position: NC_045512v2:266-13483
Genomic Size: 13218
Strand: +
View DNA for this feature (wuhCor1/SARS-CoV-2)

Alternative/human readable nameORF1a
Status of CDS start annotation (none, unknown, incomplete, or complete)cmpl
Status of CDS end annotation (none, unknown, incomplete, or complete)cmpl
Exon frame {0,1,2}, or -1 if no frame for exon0
Transcript typeN.a.
Primary identifier for geneORF1a
Alternative/human readable gene nameORF1a
Gene typeN.a.
Protein ProductYP_009725295.1
NCBI Gene ID43740578

Links to sequence:

Data schema/format description and download

Go to NCBI Genes track controls

Data last updated at UCSC: 2020-05-18 17:05:46


The NCBI Gene track for the 13 Jan 2020 SARS-CoV-2 virus/GCF_009858895.2 genome assembly is constructed from the NCBI nuccore entry for NC_045512.2

Data Access

The raw data can be explored interactively with the Table Browser, or the Data Integrator. For automated analysis, the genome annotation is stored in a bigBed file that can be downloaded from the download server. Annotations can be converted to ASCII text by our tool bigBedToBed which can be compiled from the source code or downloaded as a precompiled binary for your system. Instructions for downloading source code and binaries can be found on our utilities page. The tool can also be used to obtain features within a given range, for example:

bigBedToBed -chrom=NC_045512v2 -start=0 -end=29902 stdout

Please refer to our mailing list archives for questions, or our Data Access FAQ for more information.


This track was created by Max Haeussler and Brian Raney at UCSC, with help from Daniel Schmelter and many others. Thanks to NCBI and the US National Institutes of Health for making all data available for download.