EPDnew A. thaliana promoters (version 004) (AT1G55580_1)
Outside Link: AT1G55580_1
Promoter ID: AT1G55580_1
Score: 900
Position: chr1:20764022-20764081
Genomic Size: 60
Strand: +
View DNA for this feature (araTha1/thale cress)
View table schema

Go to EPDnew v004 track controls


This track represents the experimentally validated promoters generated by EPD for A. thaliana version 4.

Display Conventions and Configuration

Each element in this track is a representation of the promoter sequence presented in the EPD viewer page (here an example). Following this convention, the narrow part of the elements represents the 49 bp upstream of the annotated transcription start site (TSS) whereas the thick part represents the TSS plus the 10 bp downstream.


For a description of the methodologies and principles used by EPD to predict TSSs, refer to Dreos et al. (2013) in the References section below. A more detailed description of how this data was generated can be found here.


Data was generated by the EPD team at the Swiss Institute of Bioinformatics (Dreos et al. 2013). For inquiries, please contact us using the online form here or post a message on philipp.bucher@epfl.ch.


Dreos R, Ambrosini G, Perier RC, Bucher P. EPD and EPDnew, high-quality promoter resources in the next-generation sequencing era. Nucleic Acids Res. 2013 Jan 1;41(D1):D157-64. PMID: 23193273.