All gaps of unknown nucleotides (N's), including AGP annotated gaps
Position: NW_019093248.1:1095104-1095387
Genomic Size: 284
View DNA for this feature (GCF_001856805.1/P_rapae_3842_assembly_v2 Oct. 2016)
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Go to All Gaps track controls


This track shows all gaps (any sequence of N's) in the 16 Oct 2016 Pieris rapae/GCF_001856805.1_P_rapae_3842_assembly_v2 genome assembly. Not all gaps were annotated in the AGP file, this track includes all sequences of N's in the assembly.

Genome assembly procedures are covered in the NCBI assembly documentation.
NCBI also provides specific information about this assembly.

Any sequence of N's in the assembly is marked as a gap in this track. The standard gap track only shows the gaps as annotated in the AGP file: GCF_001856805.1_P_rapae_3842_assembly_v2.agp.gz
The NCBI document AGP Specification describes the format of the AGP file.

Gaps are represented as black boxes in this track. There is no information in this track about order or orientation of the contigs on either side of the gap.

Gap count and coverage: gap count: 7,235 bases covered: 3,151,533