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Configure Tracks on UCSC Genome Browser: Marmoset May 2020 (Callithrix_jacchus_cj1700_1.1/calJac4)
  Tracks:    Groups:
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-   Mapping and Sequencing    
Base Position Chromosome position in bases. (Clicks here zoom in 3x)
Assembly Assembly from Fragments
Gap Gap Locations
GC Percent GC Percent in 5-Base Windows
INSDC Accession at INSDC - International Nucleotide Sequence Database Collaboration
RefSeq Acc RefSeq Accession
Restr Enzymes Restriction Enzymes from REBASE
Short Match Perfect Matches to Short Sequence ()
-   Genes and Gene Predictions    
CAT Genes CAT Gene Annotations
NCBI RefSeq RefSeq gene predictions from NCBI
AUGUSTUS AUGUSTUS ab initio gene predictions v3.1
Genscan Genes Genscan Gene Predictions
Other RefSeq Non-Marmoset RefSeq Genes
-   mRNA and EST    
Marmoset ESTs Marmoset ESTs Including Unspliced
Marmoset mRNAs Marmoset mRNAs from GenBank
Other mRNAs Non-Marmoset mRNAs from GenBank
Spliced ESTs Marmoset ESTs That Have Been Spliced
UW Iso-Seq University of Washington Iso-Seq Mappings
-   Expression and Regulation    
CpG Islands CpG Islands (Islands < 300 Bases are Light Green)
     Unmasked CpG     CpG Islands on All Sequence (Islands < 300 Bases are Light Green)
     CpG Islands     CpG Islands (Islands < 300 Bases are Light Green)
-   Comparative Genomics    
Crab-eating macaque Chain/Net Crab-eating macaque (Jun. 2013 (Macaca_fascicularis_5.0/macFas5)), Chain and Net Alignments
mm10 ChainNet Mouse (Dec. 2011 (GRCm38/mm10)), Chain and Net Alignments
Mouse Chain/Net Mouse (Jun. 2020 (GRCm39/mm39)), Chain and Net Alignments
Human Chain/Net Human (Dec. 2013 (GRCh38/hg38)), Chain and Net Alignments
-   Variation and Repeats    
RepeatMasker Repeating Elements by RepeatMasker
Interrupted Rpts Fragments of Interrupted Repeats Joined by RepeatMasker ID
Microsatellite Microsatellites - Di-nucleotide and Tri-nucleotide Repeats
Simple Repeats Simple Tandem Repeats by TRF
WM + SDust Genomic Intervals Masked by WindowMasker + SDust