Gap Track Settings
 
Gap Locations   (All Mapping and Sequencing tracks)

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Data schema/format description and download
Assembly: Elephant Jul. 2009 (Broad/loxAfr3)
Data last updated at UCSC: 2009-07-15

Description

This track depicts gaps in the assembly.

Gaps are represented as black boxes in this track. If the relative order and orientation of the contigs on either side of the gap is supported by read pair data, it is a bridged gap and a white line is drawn through the black box representing the gap.

All gaps in this assembly are bridged gaps in the scaffolds.