Database: xenTro2 Primary Table: estOrientInfo Row Count: 1,386,689   Data last updated: 2016-04-24 Format description: Extra information on ESTs - calculated by polyInfo program On download server: MariaDB table dump directory
field
example
SQL type
description
bin
585
smallint(5) unsigned
Indexing field to speed chromosome range queries.
chrom
scaffold_1
varchar(255)
Reference sequence chromosome or scaffold
chromStart
63
int(10) unsigned
Start position in chromosome
chromEnd
130
int(10) unsigned
End position in chromosome
name
AL958091
varchar(255)
Accession of EST
intronOrientation
0
smallint(6)
Orientation of introns with respect to EST
sizePolyA
3
smallint(6)
Number of trailing A's
revSizePolyA
0
smallint(6)
Number of trailing A's on reverse strand
signalPos
0
smallint(6)
Position of start of polyA signal relative to end of EST or 0 if no signal