Schema for estOrientInfo
  Database: dm2    Primary Table: estOrientInfo    Row Count: 943,553   Data last updated: 2016-05-26
Format description: Extra information on ESTs - calculated by polyInfo program
On download server: MariaDB table dump directory
fieldexampleSQL type description
bin 606smallint(5) unsigned Indexing field to speed chromosome range queries.
chrom chr2Lvarchar(255) Reference sequence chromosome or scaffold
chromStart 2777000int(10) unsigned Start position in chromosome
chromEnd 2777255int(10) unsigned End position in chromosome
name EC266713varchar(255) Accession of EST
intronOrientation 0smallint(6) Orientation of introns with respect to EST
sizePolyA 0smallint(6) Number of trailing A's
revSizePolyA 0smallint(6) Number of trailing A's on reverse strand
signalPos 0smallint(6) Position of start of polyA signal relative to end of EST or 0 if no signal
revSignalPos 0smallint(6) PolyA signal position on reverse strand if any

Connected Tables and Joining Fields
        dm2.all_est.qName (via estOrientInfo.name)
      dm2.est.qName (via estOrientInfo.name)
      dm2.intronEst.qName (via estOrientInfo.name)
      hgFixed.gbCdnaInfo.acc (via estOrientInfo.name)
      hgFixed.gbSeq.acc (via estOrientInfo.name)
      hgFixed.imageClone.acc (via estOrientInfo.name)

Sample Rows
 
binchromchromStartchromEndnameintronOrientationsizePolyArevSizePolyAsignalPosrevSignalPos
606chr2L27770002777255EC26671300000
606chr2L27762562776787EC26630400000
606chr2L27761072776534EC261709000150
606chr2L27760842776591EC26261200000
606chr2L27754232775869EC23003400000
606chr2L27745712774943EC26734700000
606chr2L27745212774696EC05542100000
606chr2L27745112774696EC05216000000
606chr2L27744402774696EC05215500000
606chr2L27744022774696EC05572500000

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.