Schema for mmBlastTab
  Database: hg38    Primary Table: mmBlastTab    Row Count: 122,653   Data last updated: 2022-07-13
Format description: Blast alignments of Mouse genes
fieldexampleSQL type info description
query ENST00000426406.4varchar(255) values Name of sequence in this assembly (query)
target ENSMUST00000099609.2varchar(255) values Name of sequence in other assembly (target)
identity 82.05float range Percent identity
aliLength 312int(10) unsigned range Length of alignment
mismatch 56int(10) unsigned range Number of mismatches
gapOpen 0int(10) unsigned range Number of gap openings
qStart 0int(10) unsigned range Start in query (0 based)
qEnd 312int(10) unsigned range End in query (non-inclusive)
tStart 0int(10) unsigned range Start in target (0 based)
tEnd 312int(10) unsigned range End in target (non-inclusive)
eValue 1e-146double range Expectation value
bitScore 516double range Bit score

Connected Tables and Joining Fields
        hg38.bioCycPathway.kgID (via mmBlastTab.query)
      hg38.ccdsKgMap.geneId (via mmBlastTab.query)
      hg38.ceBlastTab.query (via mmBlastTab.query)
      hg38.dmBlastTab.query (via mmBlastTab.query)
      hg38.drBlastTab.query (via mmBlastTab.query)
      hg38.foldUtr3.name (via mmBlastTab.query)
      hg38.foldUtr5.name (via mmBlastTab.query)
      hg38.gnfAtlas2Distance.query (via mmBlastTab.query)
      hg38.gnfAtlas2Distance.target (via mmBlastTab.query)
      hg38.gnfU95Distance.query (via mmBlastTab.query)
      hg38.gnfU95Distance.target (via mmBlastTab.query)
      hg38.humanHprdP2P.query (via mmBlastTab.query)
      hg38.humanHprdP2P.target (via mmBlastTab.query)
      hg38.humanVidalP2P.query (via mmBlastTab.query)
      hg38.humanVidalP2P.target (via mmBlastTab.query)
      hg38.humanWankerP2P.query (via mmBlastTab.query)
      hg38.humanWankerP2P.target (via mmBlastTab.query)
      hg38.keggPathway.kgID (via mmBlastTab.query)
      hg38.kgAlias.kgID (via mmBlastTab.query)
      hg38.kgColor.kgID (via mmBlastTab.query)
      hg38.kgProtAlias.kgID (via mmBlastTab.query)
      hg38.kgSpAlias.kgID (via mmBlastTab.query)
      hg38.kgTargetAli.qName (via mmBlastTab.query)
      hg38.kgXref.kgID (via mmBlastTab.query)
      hg38.knownAttrs.kgID (via mmBlastTab.query)
      hg38.knownBlastTab.query (via mmBlastTab.query)
      hg38.knownBlastTab.target (via mmBlastTab.query)
      hg38.knownCanonical.transcript (via mmBlastTab.query)
      hg38.knownCds.name (via mmBlastTab.query)
      hg38.knownGene.name (via mmBlastTab.query)
      hg38.knownGeneMrna.name (via mmBlastTab.query)
      hg38.knownGenePep.name (via mmBlastTab.query)
      hg38.knownIsoforms.transcript (via mmBlastTab.query)
      hg38.knownToEnsembl.name (via mmBlastTab.query)
      hg38.knownToGnfAtlas2.name (via mmBlastTab.query)
      hg38.knownToHprd.name (via mmBlastTab.query)
      hg38.knownToKeggEntrez.name (via mmBlastTab.query)
      hg38.knownToLocusLink.name (via mmBlastTab.query)
      hg38.knownToLynx.name (via mmBlastTab.query)
      hg38.knownToMrna.name (via mmBlastTab.query)
      hg38.knownToMrnaSingle.name (via mmBlastTab.query)
      hg38.knownToMupit.name (via mmBlastTab.query)
      hg38.knownToNextProt.name (via mmBlastTab.query)
      hg38.knownToPfam.name (via mmBlastTab.query)
      hg38.knownToRefSeq.name (via mmBlastTab.query)
      hg38.knownToSuper.gene (via mmBlastTab.query)
      hg38.knownToTag.name (via mmBlastTab.query)
      hg38.knownToU133.name (via mmBlastTab.query)
      hg38.knownToU95.name (via mmBlastTab.query)
      hg38.knownToVisiGene.name (via mmBlastTab.query)
      hg38.knownToWikipedia.name (via mmBlastTab.query)
      hg38.rnBlastTab.query (via mmBlastTab.query)
      hg38.scBlastTab.query (via mmBlastTab.query)
      hg38.ucscScop.ucscId (via mmBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
ENST00000426406.4ENSMUST00000099609.282.05312560031203121e-146516
ENST00000332831.5ENSMUST00000099609.282.05312560031203121e-146516
ENST00000616016.5ENSMUST00000218788.271.145511411130084305411e-160564
ENST00000618323.5ENSMUST00000218788.271.015521411130084405412e-160564
ENST00000342066.8ENSMUST00000218788.268.965671421212168005412e-155547
ENST00000616125.5ENSMUST00000218788.266.07389100102075721605414e-93340
ENST00000616125.5ENSMUST00000218788.266.67993021212200964e-23107
ENST00000617307.5ENSMUST00000218788.265.675681391312166005412e-139494
ENST00000618181.5ENSMUST00000218788.266.07389100101905551605415e-93339
ENST00000618181.5ENSMUST00000218788.266.67993021042030963e-23107

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.