Schema for knownGeneMrna
  Database: hg38    Primary Table: knownGeneMrna    Row Count: 272,178   Data last updated: 2022-05-15
Format description: The mRNA sequence that represents each UCSC Genes transcript.
fieldexampleSQL type info description
name ENST00000456328.2varchar(255) values Name of gene
seq GTTAACTTGCCGTCAGCCTTTTCTTTG...longblob   mRNA sequence

Connected Tables and Joining Fields
        hg38.bioCycPathway.kgID (via knownGeneMrna.name)
      hg38.ccdsKgMap.geneId (via knownGeneMrna.name)
      hg38.ceBlastTab.query (via knownGeneMrna.name)
      hg38.dmBlastTab.query (via knownGeneMrna.name)
      hg38.drBlastTab.query (via knownGeneMrna.name)
      hg38.foldUtr3.name (via knownGeneMrna.name)
      hg38.foldUtr5.name (via knownGeneMrna.name)
      hg38.gnfAtlas2Distance.query (via knownGeneMrna.name)
      hg38.gnfAtlas2Distance.target (via knownGeneMrna.name)
      hg38.gnfU95Distance.query (via knownGeneMrna.name)
      hg38.gnfU95Distance.target (via knownGeneMrna.name)
      hg38.humanHprdP2P.query (via knownGeneMrna.name)
      hg38.humanHprdP2P.target (via knownGeneMrna.name)
      hg38.humanVidalP2P.query (via knownGeneMrna.name)
      hg38.humanVidalP2P.target (via knownGeneMrna.name)
      hg38.humanWankerP2P.query (via knownGeneMrna.name)
      hg38.humanWankerP2P.target (via knownGeneMrna.name)
      hg38.keggPathway.kgID (via knownGeneMrna.name)
      hg38.kgAlias.kgID (via knownGeneMrna.name)
      hg38.kgColor.kgID (via knownGeneMrna.name)
      hg38.kgProtAlias.kgID (via knownGeneMrna.name)
      hg38.kgSpAlias.kgID (via knownGeneMrna.name)
      hg38.kgTargetAli.qName (via knownGeneMrna.name)
      hg38.kgXref.kgID (via knownGeneMrna.name)
      hg38.knownAttrs.kgID (via knownGeneMrna.name)
      hg38.knownBlastTab.query (via knownGeneMrna.name)
      hg38.knownBlastTab.target (via knownGeneMrna.name)
      hg38.knownCanonical.transcript (via knownGeneMrna.name)
      hg38.knownCds.name (via knownGeneMrna.name)
      hg38.knownGene.name (via knownGeneMrna.name)
      hg38.knownGenePep.name (via knownGeneMrna.name)
      hg38.knownIsoforms.transcript (via knownGeneMrna.name)
      hg38.knownToEnsembl.name (via knownGeneMrna.name)
      hg38.knownToGnfAtlas2.name (via knownGeneMrna.name)
      hg38.knownToHprd.name (via knownGeneMrna.name)
      hg38.knownToKeggEntrez.name (via knownGeneMrna.name)
      hg38.knownToLocusLink.name (via knownGeneMrna.name)
      hg38.knownToLynx.name (via knownGeneMrna.name)
      hg38.knownToMrna.name (via knownGeneMrna.name)
      hg38.knownToMrnaSingle.name (via knownGeneMrna.name)
      hg38.knownToMupit.name (via knownGeneMrna.name)
      hg38.knownToNextProt.name (via knownGeneMrna.name)
      hg38.knownToPfam.name (via knownGeneMrna.name)
      hg38.knownToRefSeq.name (via knownGeneMrna.name)
      hg38.knownToSuper.gene (via knownGeneMrna.name)
      hg38.knownToTag.name (via knownGeneMrna.name)
      hg38.knownToU133.name (via knownGeneMrna.name)
      hg38.knownToU95.name (via knownGeneMrna.name)
      hg38.knownToVisiGene.name (via knownGeneMrna.name)
      hg38.knownToWikipedia.name (via knownGeneMrna.name)
      hg38.mmBlastTab.query (via knownGeneMrna.name)
      hg38.rnBlastTab.query (via knownGeneMrna.name)
      hg38.scBlastTab.query (via knownGeneMrna.name)
      hg38.ucscScop.ucscId (via knownGeneMrna.name)

Sample Rows
 
nameseq
ENST00000456328.2GTTAACTTGCCGTCAGCCTTTTCTTTGACCTCTTCTTTCTGTTCATGTGTATTTGCTGTCTCTTAGCCCAGACTTCCCGTGTCCTTTCCACCGGGCCTTTGAGAGGTCACAGGGTCTTGATGCTGTGG ...
ENST00000450305.2GTGTCTGACTTCCAGCAACTGCTGGCCTGTGCCAGGGTGCAAGCTGAGTTGGAGGAAAGATGAGTGAGAGCATCAACTTCTCTCACAACCTAGGCCAGTGTGTGGTGATGCCAGGCATGCCCTTCCCC ...
ENST00000488147.1ATGGGAGCCGTGTGCACGTCGGGAGCTCGGAGTGAGCGCACCATGACTCCTGTGAGGATGCAGCACTCCCTGGCAGGTCAGACCTATGCCGTGCCCTTCATCCAGCCAGACCTGCGGCGAGAGGAGGC ...
ENST00000619216.1TGTGGGAGAGGAACATGGGCTCAGGACAGCGGGTGTCAGCTTGCCTGACCCCCATGTCGCCTCTGTAG
ENST00000473358.1GTGCACACGGCTCCCATGCGTTGTCTTCCGAGCGTCAGGCCGCCCCTACCCGTGCTTTCTGCTCTGCAGACCCTCTTCCTAGACCTCCGTCCTTTGTCCCATCGCTGCCTTCCCCTCAAGCTCAGGGC ...
ENST00000469289.1TCATCAGTCCAAAGTCCAGCAGTTGTCCCTCCTGGAATCCGTTGGCTTGCCTCCGGCATTTTTGGCCCTTGCCTTTTAGGGTTGCCAGATTAAAAGACAGGATGCCCAGCTAGTTTGAATTTTAGATA ...
ENST00000607096.1GGATGCCCAGCTAGTTTGAATTTTAGATAAACAACGAATAATTTCGTAGCATAAATATGTCCCAAGCTTAGTTTGGGACATACTTATGCTAAAAAACATTATTGGTTGTTTATCTGAGATTCAGAATT ...
ENST00000417324.1CACACAACGGGGTTTCGGGGCTGTGGACCCTGTGCCAGGAAAGGAAGGGCGCAGCTCCTGCAATGCGGAGCAGCCAGGGCAGTGGGCACCAGGCTTTAGCCTCCCTTTCTCACCCTACAGAGGGCAGG ...
ENST00000461467.1GGGGTTTCGGGGCTGTGGACCCTGTGCCAGGAAAGGAAGGGCGCAGCTCCTGCAATGCGGAGCAGCCAGGGCAGTGGGCACCAGGCTTTAGCCTCCCTTTCTCACCCTACAGAGGGCAGGCCCTTCAG ...
ENST00000606857.1GCGGTATCTAAATTTGTATTGATTGGACTTTCAAGCTCTTGGGAGATGCATCTTTTTCTTTTTTGGTTCTTCTCTGTGTTCTACATGGGAATTATCCTGGAAAATCTCTTCATTGTGTTCACAGTAAT ...

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.