Schema for gnfAtlas2Distance
  Database: hg38    Primary Table: gnfAtlas2Distance    Row Count: 144,307,000   Data last updated: 2022-05-15
Format description: Distance between two genes in expression space.
fieldexampleSQL type description
query ENST00000376567.6varchar(255) Name of one gene
target ENST00000376567.6varchar(255) Name of other gene
distance 0float Distance in expression space, always >= 0

Connected Tables and Joining Fields
        hg38.bioCycPathway.kgID (via gnfAtlas2Distance.query)
      hg38.ccdsKgMap.geneId (via gnfAtlas2Distance.query)
      hg38.ceBlastTab.query (via gnfAtlas2Distance.query)
      hg38.dmBlastTab.query (via gnfAtlas2Distance.query)
      hg38.drBlastTab.query (via gnfAtlas2Distance.query)
      hg38.foldUtr3.name (via gnfAtlas2Distance.query)
      hg38.foldUtr5.name (via gnfAtlas2Distance.query)
      hg38.gnfU95Distance.query (via gnfAtlas2Distance.query)
      hg38.gnfU95Distance.target (via gnfAtlas2Distance.query)
      hg38.humanHprdP2P.query (via gnfAtlas2Distance.query)
      hg38.humanHprdP2P.target (via gnfAtlas2Distance.query)
      hg38.humanVidalP2P.query (via gnfAtlas2Distance.query)
      hg38.humanVidalP2P.target (via gnfAtlas2Distance.query)
      hg38.humanWankerP2P.query (via gnfAtlas2Distance.query)
      hg38.humanWankerP2P.target (via gnfAtlas2Distance.query)
      hg38.keggPathway.kgID (via gnfAtlas2Distance.query)
      hg38.kgAlias.kgID (via gnfAtlas2Distance.query)
      hg38.kgColor.kgID (via gnfAtlas2Distance.query)
      hg38.kgProtAlias.kgID (via gnfAtlas2Distance.query)
      hg38.kgSpAlias.kgID (via gnfAtlas2Distance.query)
      hg38.kgTargetAli.qName (via gnfAtlas2Distance.query)
      hg38.kgXref.kgID (via gnfAtlas2Distance.query)
      hg38.knownAttrs.kgID (via gnfAtlas2Distance.query)
      hg38.knownBlastTab.query (via gnfAtlas2Distance.query)
      hg38.knownBlastTab.target (via gnfAtlas2Distance.query)
      hg38.knownCanonical.transcript (via gnfAtlas2Distance.query)
      hg38.knownCds.name (via gnfAtlas2Distance.query)
      hg38.knownGene.name (via gnfAtlas2Distance.query)
      hg38.knownGeneMrna.name (via gnfAtlas2Distance.query)
      hg38.knownGenePep.name (via gnfAtlas2Distance.query)
      hg38.knownIsoforms.transcript (via gnfAtlas2Distance.query)
      hg38.knownToEnsembl.name (via gnfAtlas2Distance.query)
      hg38.knownToGnfAtlas2.name (via gnfAtlas2Distance.query)
      hg38.knownToHprd.name (via gnfAtlas2Distance.query)
      hg38.knownToKeggEntrez.name (via gnfAtlas2Distance.query)
      hg38.knownToLocusLink.name (via gnfAtlas2Distance.query)
      hg38.knownToLynx.name (via gnfAtlas2Distance.query)
      hg38.knownToMrna.name (via gnfAtlas2Distance.query)
      hg38.knownToMrnaSingle.name (via gnfAtlas2Distance.query)
      hg38.knownToMupit.name (via gnfAtlas2Distance.query)
      hg38.knownToNextProt.name (via gnfAtlas2Distance.query)
      hg38.knownToPfam.name (via gnfAtlas2Distance.query)
      hg38.knownToRefSeq.name (via gnfAtlas2Distance.query)
      hg38.knownToSuper.gene (via gnfAtlas2Distance.query)
      hg38.knownToTag.name (via gnfAtlas2Distance.query)
      hg38.knownToU133.name (via gnfAtlas2Distance.query)
      hg38.knownToU95.name (via gnfAtlas2Distance.query)
      hg38.knownToVisiGene.name (via gnfAtlas2Distance.query)
      hg38.knownToWikipedia.name (via gnfAtlas2Distance.query)
      hg38.mmBlastTab.query (via gnfAtlas2Distance.query)
      hg38.rnBlastTab.query (via gnfAtlas2Distance.query)
      hg38.scBlastTab.query (via gnfAtlas2Distance.query)
      hg38.ucscScop.ucscId (via gnfAtlas2Distance.query)

Sample Rows
 
querytargetdistance
ENST00000376567.6ENST00000376567.60
ENST00000376567.6ENST00000400410.50
ENST00000376567.6ENST00000419412.50
ENST00000376567.6ENST00000400486.50
ENST00000376567.6ENST00000453510.50
ENST00000376567.6ENST00000484556.10.203291
ENST00000376567.6ENST00000514434.10.203291
ENST00000376567.6ENST00000513514.20.203291
ENST00000376567.6ENST00000465966.40.203291
ENST00000376567.6ENST00000514534.10.203291

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.