Schema for gtexGeneModelV8
  Database: hg38    Primary Table: gtexGeneModelV8    Row Count: 56,200   Data last updated: 2020-04-23
Format description: A gene prediction.
fieldexampleSQL type info description
bin 585smallint(5) unsigned range Indexing field to speed chromosome range queries.
name ENSG00000223972.5varchar(255) values Name of gene
chrom chr1varchar(255) values Reference sequence chromosome or scaffold
strand +char(1) values + or - for strand
txStart 11868int(10) unsigned range Transcription start position (or end position for minus strand item)
txEnd 14403int(10) unsigned range Transcription end position (or start position for minus strand item)
cdsStart 14403int(10) unsigned range Coding region start (or end position for minus strand item)
cdsEnd 14403int(10) unsigned range Coding region end (or start position for minus strand item)
exonCount 4int(10) unsigned range Number of exons
exonStarts 11868,12612,12974,13220,longblob   Exon start positions (or end positions for minus strand item)
exonEnds 12227,12721,13052,14403,longblob   Exon end positions (or start positions for minus strand item)

Connected Tables and Joining Fields
        hg38.gtexGeneV8.geneId (via gtexGeneModelV8.name)
      hgFixed.gtexSampleDataV8.geneId (via gtexGeneModelV8.name)

Sample Rows
 
binnamechromstrandtxStarttxEndcdsStartcdsEndexonCountexonStartsexonEnds
585ENSG00000223972.5chr1+11868144031440314403411868,12612,12974,13220,12227,12721,13052,14403,
585ENSG00000227232.5chr1-144092955329553295531114409,15004,15795,16606,16857,17232,17605,17914,18267,24737,29533,14501,15038,15947,16765,17055,17368,17742,18061,18366,24891,29553,
585ENSG00000278267.1chr1-17368174361743617436117368,17436,
585ENSG00000243485.5chr1+29570311093110931109429570,30266,30503,30975,30039,30365,30667,31109,
585ENSG00000237613.2chr1-34553360813608136081334553,35244,35720,35174,35481,36081,
585ENSG00000268020.3chr1+52472533125331253312152472,53312,
585ENSG00000240361.1chr1+62947638876388763887162947,63887,
585ENSG00000186092.4chr1+69090700087000870008169090,70008,
585ENSG00000238009.6chr1-89294129223129223129223889294,90050,91105,92090,110952,112699,120720,129054,89550,90286,91629,92240,111357,112804,120932,129223,
73ENSG00000233750.3chr1+1310241348361348361348362131024,133723,133373,134836,

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.