Schema for wgEncodeGencodeAttrsV39lift37
  Database: hg19    Primary Table: wgEncodeGencodeAttrsV39lift37    Row Count: 246,422   Data last updated: 2022-01-16
fieldexampleSQL type info
geneId ENSG00000223972.5_1varchar(255) values
geneName DDX11L1varchar(255) values
geneType transcribed_unprocessed_pse...varchar(255) values
geneStatus  varchar(255) values
transcriptId ENST00000456328.2_1varchar(255) values
transcriptName DDX11L1-202varchar(255) values
transcriptType processed_transcriptvarchar(255) values
transcriptStatus  varchar(255) values
havanaGeneId OTTHUMG00000000961.2_1varchar(255) values
havanaTranscriptId OTTHUMT00000362751.1_1varchar(255) values
ccdsId  varchar(255) values
level 2int(11) range
transcriptClass pseudovarchar(255) values
proteinId  varchar(255) values

Connected Tables and Joining Fields
        hg19.wgEncodeGencodeGeneSourceV39lift37.geneId (via wgEncodeGencodeAttrsV39lift37.geneId)
      hg19.wgEncodeGencodeAnnotationRemarkV39lift37.transcriptId (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodeBasicV39lift37.name (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodeCompV39lift37.name (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodeGeneSymbolV39lift37.transcriptId (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodePdbV39lift37.transcriptId (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodePseudoGeneV39lift37.name (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodePubMedV39lift37.transcriptId (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodeRefSeqV39lift37.transcriptId (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodeTagV39lift37.transcriptId (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodeTranscriptSourceV39lift37.transcriptId (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodeTranscriptSupportV39lift37.transcriptId (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodeTranscriptionSupportLevelV39lift37.transcriptId (via wgEncodeGencodeAttrsV39lift37.transcriptId)
      hg19.wgEncodeGencodeUniProtV39lift37.transcriptId (via wgEncodeGencodeAttrsV39lift37.transcriptId)

Sample Rows
 
geneIdgeneNamegeneTypegeneStatustranscriptIdtranscriptNametranscriptTypetranscriptStatushavanaGeneIdhavanaTranscriptIdccdsIdleveltranscriptClassproteinId
ENSG00000223972.5_1DDX11L1transcribed_unprocessed_pseudogeneENST00000456328.2_1DDX11L1-202processed_transcriptOTTHUMG00000000961.2_1OTTHUMT00000362751.1_12pseudo
ENSG00000223972.5_1DDX11L1transcribed_unprocessed_pseudogeneENST00000450305.2_1DDX11L1-201transcribed_unprocessed_pseudogeneOTTHUMG00000000961.2_1OTTHUMT00000002844.2_12pseudo
ENSG00000227232.5_1WASH7Punprocessed_pseudogeneENST00000488147.1_1WASH7P-201unprocessed_pseudogeneOTTHUMG00000000958.1_1OTTHUMT00000002839.1_12pseudo
ENSG00000243485.5_1MIR1302-2HGlncRNAENST00000473358.1_1MIR1302-2HG-202lncRNAOTTHUMG00000000959.2_1OTTHUMT00000002840.1_12nonCoding
ENSG00000243485.5_1MIR1302-2HGlncRNAENST00000469289.1_1MIR1302-2HG-201lncRNAOTTHUMG00000000959.2_1OTTHUMT00000002841.2_12nonCoding
ENSG00000237613.2_1FAM138AlncRNAENST00000417324.1_1FAM138A-201lncRNAOTTHUMG00000000960.1_1OTTHUMT00000002842.1_12nonCoding
ENSG00000237613.2_1FAM138AlncRNAENST00000461467.1_1FAM138A-202lncRNAOTTHUMG00000000960.1_1OTTHUMT00000002843.1_12nonCoding
ENSG00000268020.3_1OR4G4Punprocessed_pseudogeneENST00000606857.1_1OR4G4P-201unprocessed_pseudogeneOTTHUMG00000185779.1_1OTTHUMT00000471235.1_12pseudo
ENSG00000240361.2_1OR4G11Ptranscribed_unprocessed_pseudogeneENST00000642116.1_1OR4G11P-202processed_transcriptOTTHUMG00000001095.3_1OTTHUMT00000492680.1_12pseudo
ENSG00000240361.2_1OR4G11Ptranscribed_unprocessed_pseudogeneENST00000492842.2_1OR4G11P-201transcribed_unprocessed_pseudogeneOTTHUMG00000001095.3_1OTTHUMT00000003224.3_12pseudo

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.