Schema for knownBlastTab
  Database: mm10    Primary Table: knownBlastTab    Row Count: 9,164,965   Data last updated: 2019-09-20
Format description: Blast alignments to other proteins from this species.
fieldexampleSQL type description
query ENSMUST00000070533.4varchar(255) Name of sequence in this assembly (query)
target ENSMUST00000070533.4varchar(255) Name of sequence in other assembly (target)
identity 100float Percent identity
aliLength 647int(10) unsigned Length of alignment
mismatch 0int(10) unsigned Number of mismatches
gapOpen 0int(10) unsigned Number of gap openings
qStart 0int(10) unsigned Start in query (0 based)
qEnd 647int(10) unsigned End in query (non-inclusive)
tStart 0int(10) unsigned Start in target (0 based)
tEnd 647int(10) unsigned End in target (non-inclusive)
eValue 0double Expectation value
bitScore 1117double Bit score

Connected Tables and Joining Fields
        mm10.bioCycPathway.kgID (via knownBlastTab.query)
      mm10.ccdsKgMap.geneId (via knownBlastTab.query)
      mm10.ceBlastTab.query (via knownBlastTab.query)
      mm10.dmBlastTab.query (via knownBlastTab.query)
      mm10.drBlastTab.query (via knownBlastTab.query)
      mm10.foldUtr3.name (via knownBlastTab.query)
      mm10.foldUtr5.name (via knownBlastTab.query)
      mm10.hgBlastTab.query (via knownBlastTab.query)
      mm10.keggPathway.kgID (via knownBlastTab.query)
      mm10.kgAlias.kgID (via knownBlastTab.query)
      mm10.kgColor.kgID (via knownBlastTab.query)
      mm10.kgProtAlias.kgID (via knownBlastTab.query)
      mm10.kgProtMap2.qName (via knownBlastTab.query)
      mm10.kgSpAlias.kgID (via knownBlastTab.query)
      mm10.kgTargetAli.qName (via knownBlastTab.query)
      mm10.kgTxInfo.name (via knownBlastTab.query)
      mm10.kgXref.kgID (via knownBlastTab.query)
      mm10.knownAttrs.kgID (via knownBlastTab.query)
      mm10.knownCanonical.transcript (via knownBlastTab.query)
      mm10.knownCds.name (via knownBlastTab.query)
      mm10.knownGene.name (via knownBlastTab.query)
      mm10.knownGeneMrna.name (via knownBlastTab.query)
      mm10.knownGenePep.name (via knownBlastTab.query)
      mm10.knownIsoforms.transcript (via knownBlastTab.query)
      mm10.knownToEnsembl.name (via knownBlastTab.query)
      mm10.knownToKeggEntrez.name (via knownBlastTab.query)
      mm10.knownToLocusLink.name (via knownBlastTab.query)
      mm10.knownToLynx.name (via knownBlastTab.query)
      mm10.knownToMrna.name (via knownBlastTab.query)
      mm10.knownToMrnaSingle.name (via knownBlastTab.query)
      mm10.knownToPfam.name (via knownBlastTab.query)
      mm10.knownToRefSeq.name (via knownBlastTab.query)
      mm10.knownToSuper.gene (via knownBlastTab.query)
      mm10.knownToTag.name (via knownBlastTab.query)
      mm10.knownToVisiGene.name (via knownBlastTab.query)
      mm10.knownToWikipedia.name (via knownBlastTab.query)
      mm10.rnBlastTab.query (via knownBlastTab.query)
      mm10.scBlastTab.query (via knownBlastTab.query)
      mm10.ucscScop.ucscId (via knownBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
ENSMUST00000070533.4ENSMUST00000070533.4100647000647064701117
ENSMUST00000070533.4ENSMUST00000119973.249.2754623861086471246381e-135481
ENSMUST00000070533.4ENSMUST00000037235.650.545542409103647505802e-133474
ENSMUST00000070533.4ENSMUST00000120820.253.52383171327064703829e-105379
ENSMUST00000070533.4ENSMUST00000045550.427.9525416432975501283641e-1996.3
ENSMUST00000070533.4ENSMUST00000095438.924.383202265249564663751e-1893.2
ENSMUST00000070533.4ENSMUST00000088542.327.5221815712965131283464e-1684.7
ENSMUST00000070533.4ENSMUST00000055503.1125.48157111236552091620.00000000000272.4
ENSMUST00000070533.4ENSMUST00000015486.627.2127215882905251273960.00000000000570.9
ENSMUST00000208660.1ENSMUST00000208660.1100137100013710137102742

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.