Schema for dmBlastTab
  Database: mm10    Primary Table: dmBlastTab    Row Count: 6,028   Data last updated: 2019-09-20
Format description: Blast alignments of Drosophila genes
fieldexampleSQL type info description
query ENSMUST00000190686.6varchar(255) values Name of sequence in this assembly (query)
target FBtr0072807varchar(255) values Name of sequence in other assembly (target)
identity 49.1float range Percent identity
aliLength 167int(10) unsigned range Length of alignment
mismatch 78int(10) unsigned range Number of mismatches
gapOpen 4int(10) unsigned range Number of gap openings
qStart 0int(10) unsigned range Start in query (0 based)
qEnd 164int(10) unsigned range End in query (non-inclusive)
tStart 0int(10) unsigned range Start in target (0 based)
tEnd 163int(10) unsigned range End in target (non-inclusive)
eValue 5e-27double range Expectation value
bitScore 122double range Bit score

Connected Tables and Joining Fields
        mm10.bioCycPathway.kgID (via dmBlastTab.query)
      mm10.ccdsKgMap.geneId (via dmBlastTab.query)
      mm10.ceBlastTab.query (via dmBlastTab.query)
      mm10.drBlastTab.query (via dmBlastTab.query)
      mm10.foldUtr3.name (via dmBlastTab.query)
      mm10.foldUtr5.name (via dmBlastTab.query)
      mm10.hgBlastTab.query (via dmBlastTab.query)
      mm10.keggPathway.kgID (via dmBlastTab.query)
      mm10.kgAlias.kgID (via dmBlastTab.query)
      mm10.kgColor.kgID (via dmBlastTab.query)
      mm10.kgProtAlias.kgID (via dmBlastTab.query)
      mm10.kgProtMap2.qName (via dmBlastTab.query)
      mm10.kgSpAlias.kgID (via dmBlastTab.query)
      mm10.kgTargetAli.qName (via dmBlastTab.query)
      mm10.kgTxInfo.name (via dmBlastTab.query)
      mm10.kgXref.kgID (via dmBlastTab.query)
      mm10.knownAttrs.kgID (via dmBlastTab.query)
      mm10.knownBlastTab.query (via dmBlastTab.query)
      mm10.knownBlastTab.target (via dmBlastTab.query)
      mm10.knownCanonical.transcript (via dmBlastTab.query)
      mm10.knownCds.name (via dmBlastTab.query)
      mm10.knownGene.name (via dmBlastTab.query)
      mm10.knownGeneMrna.name (via dmBlastTab.query)
      mm10.knownGenePep.name (via dmBlastTab.query)
      mm10.knownIsoforms.transcript (via dmBlastTab.query)
      mm10.knownToEnsembl.name (via dmBlastTab.query)
      mm10.knownToKeggEntrez.name (via dmBlastTab.query)
      mm10.knownToLocusLink.name (via dmBlastTab.query)
      mm10.knownToLynx.name (via dmBlastTab.query)
      mm10.knownToMrna.name (via dmBlastTab.query)
      mm10.knownToMrnaSingle.name (via dmBlastTab.query)
      mm10.knownToPfam.name (via dmBlastTab.query)
      mm10.knownToRefSeq.name (via dmBlastTab.query)
      mm10.knownToSuper.gene (via dmBlastTab.query)
      mm10.knownToTag.name (via dmBlastTab.query)
      mm10.knownToVisiGene.name (via dmBlastTab.query)
      mm10.knownToWikipedia.name (via dmBlastTab.query)
      mm10.rnBlastTab.query (via dmBlastTab.query)
      mm10.scBlastTab.query (via dmBlastTab.query)
      mm10.ucscScop.ucscId (via dmBlastTab.query)

Sample Rows
 
querytargetidentityaliLengthmismatchgapOpenqStartqEndtStarttEndeValuebitScore
ENSMUST00000190686.6FBtr007280749.1167784016401635e-27122
ENSMUST00000007790.10FBtr008511636.112161252108324452485e-31132
ENSMUST00000037023.8FBtr033468178.57561200560566e-2195.9
ENSMUST00000027131.5FBtr034560133.52528255143538282066917e-63239
ENSMUST00000073076.11FBtr007365851.11632298371692687001e-173607
ENSMUST00000180792.7FBtr008043528.8620113420193212214e-24110
ENSMUST00000171010.7FBtr007323451.372921304028902835e-69258
ENSMUST00000170909.1FBtr008774159.462227931153341653793e-50196
ENSMUST00000071982.6FBtr007161034.436103621838626546483e-88323
ENSMUST00000096261.4FBtr008313781.4172320017201721e-75279

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.