Schema for GRC Incident - GRC Incident Database
  Database: mm39    Primary Table: grcIncidentDb Data last updated: 2023-04-11
Big Bed File Download: /gbdb/mm39/bbi/grcIncidentDb/Mm39.grcIncidentDb.bb
Item Count: 1,088
The data is stored in the binary BigBed format.

Format description: GRC incident DB, bigBed 4 + with extra field for detail page
fieldexampledescription
chromchr1Reference sequence chromosome or scaffold
chromStart133646779Start position in chromosome
chromEnd133826364End position in chromosome
nameMG-3933Short Name of item
description
Category: Clone Problem
Status: Resolved
Detail

Sample Rows
 
chromchromStartchromEndnamedescription
chr1133646779133826364MG-3933Category: Clone ProblemStatus: Resolved
chr1134977263135148632MG-135Category: Clone ProblemStatus: Resolved
chr1143217999143331440MG-3517Category: GapStatus: Resolved
chr1143327708143464425MG-4329Category: GRC HousekeepingStatus: Resolved
chr1148174413148351900MG-4380Category: GRC HousekeepingStatus: Resolved
chr1155969881156161546MG-3669Category: GapStatus: Resolved
chr1155985947156161546MG-101Category: GapStatus: Resolved
chr1155996313156161546MG-200Category: Clone ProblemStatus: Resolved
chr1167302850167450146MG-4331Category: Clone ProblemStatus: Under Review
chr1167450146167648141MG-4332Category: Clone ProblemStatus: Under Review

GRC Incident (grcIncidentDb) Track Description
 

Description

This track shows locations in the mouse assembly where assembly problems have been noted or resolved, as reported by the Genome Reference Consortium (GRC).

If you would like to report an assembly problem, please use the GRC issue reporting system.

Methods

Data for this track are extracted from the GRC incident database from the specific species *_issues.gff3 file. The track is synchronized once daily to incorporate new updates.

Credits

The data and presentation of this track were prepared by Hiram Clawson.