Schema for GRC Contigs - Genome Reference Consortium Contigs
  Database: hg38    Primary Table: ctgPos2    Row Count: 304   Data last updated: 2013-12-26
Format description: Where a contig is inside of a chromosome.
On download server: MariaDB table dump directory
fieldexampleSQL type info description
contig GL000001.2varchar(255) values Name of contig
size 197666int(10) unsigned range Size of contig
chrom chr1varchar(255) values Reference sequence chromosome or scaffold
chromStart 10000int(10) unsigned range Start in chromosome
chromEnd 207666int(10) unsigned range End in chromosome
type Fchar(1) values  

Sample Rows
 
contigsizechromchromStartchromEndtype
GL000001.2197666chr110000207666F
KI270299.140302chr1257666297968F
GL000002.2188020chr1347968535988F
GL000006.2121390471chr1585988121976459F
KI270300.1198076chr1122026459122224535F
KI270301.1278512chr1122224635122503147F
KI866532.12282185chr1122503247124785432F
KI270319.163597chr1124785532124849129F
KI270321.183495chr1124849229124932724F
KI270323.1251763chr1124932824125184587F

Note: all start coordinates in our database are 0-based, not 1-based. See explanation here.

GRC Contigs (ctgPos2) Track Description
 

Description

This track shows the names of the assembled supercontigs for the GRCh38 (hg38) assembly determined by the Genome Reference Consortium (GRC).

Data for this track were obtained from localId2acc files downloaded from GenBank.