Affine Alignment
 
Alignment between Pax5 (top ENSMUST00000014174.13 391aa) and Pax2 (bottom ENSMUST00000174490.8 394aa) score 26733

001 MDLEKNYPTPRTIRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 060
    ||+         +  |||||||||||||||||||||||||||||||||||||||||||||
001 MDMHCKADPFSAMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRV 060

061 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLA 120
    ||||||||||||||||||||||||||||||||||||+|||||||||||||||||||||||
061 SHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLA 120

121 ERVCDNDTVPSVSSINRIIRTKVQQP-------PNQPVPASSHSIVSTGSVTQVSSVSTD 173
    | +|||||||||||||||||||||||           | |  |+|| + +   ||| | |
121 EGICDNDTVPSVSSINRIIRTKVQQPFHPTPDGAGTGVTAPGHTIVPSTASPPVSSASND 180

174 SAGSSYSISGILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQ 233
      | ||||+|||||  | ++  ||||+| + |  |||| |  | | ||| +| | |||||
181 PVG-SYSINGILGI--PRSNGEKRKREEDVSEGSVPNGDSQSGVDSLRKHLRADTFTQQQ 237

234 LEVLDRVFERQHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLTSPTPADIGSSV 293
    || |||||||  | |+|  +| || ||  ||| + +|  |||++|++|++    ++||+|
238 LEALDRVFERPSYPDVFQASEHIKSEQGNEYS-LPALTPGLDEVKSSLSASANPELGSNV 296

294 PGPQSYPIVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSS 353
     | |+||+|||||+ ||||||||||||| |||||   || ||||||||||+|||||||++
297 SGTQTYPVVTGRDMTSTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSEFSGNPYSHPQYTA 356

354 YNDSWRFPNPGLLGSPYYYSPAARGAAPPAAATAYDRH 391
    ||++||| || || |||||| | ||+|| ||| |||||
357 YNEAWRFSNPALLSSPYYYSAAPRGSAPAAAAAAYDRH 394