Affine Alignment
 
Alignment between Pax5 (top ENSMUST00000014174.13 391aa) and Pax6 (bottom ENSMUST00000111086.10 436aa) score 10526

013 IRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLR------------- 059
    ++  | |||||||||||||||||  ||+|||||| | ||||||| |+             
001 MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNE 060

060 -VSHGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRL 118
     ||+||||||||||||||||+|  ||||||+||||+|| |||+|||+ |++|||||||||
061 NVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRL 120

119 LAERVCDNDTVPSVSSINRIIRTKVQQPPNQPVPASSHSIVSTGSVTQVSSVSTDSAGSS 178
    |+| || || +||||||||++|          + +    + + |   ++  ++  +    
121 LSEGVCTNDNIPSVSSINRVLRN---------LASEKQQMGADGMYDKLRMLNGQTGSWG 171

179 YSISGILGITSPSADTNKR-KRDEGIQESPVPNGHSLPGRDFLRKQMRGDL--------- 228
           | + |   |    ++ ||  |+   |  |  | |    |||  |         
172 TRPGWYPGTSVPGQPTQDGCQQQEGGGEN--TNSISSNGEDSDEAQMRLQLKRKLQRNRT 229

229 -FTQQQLEVLDRVFERQHYSDIF 250
     |||+|+| |++ ||| || |+|
230 SFTQEQIEALEKEFERTHYPDVF 252