Affine Alignment
 
Alignment between Pax9 (top ENSMUST00000153250.8 342aa) and Pax6 (bottom ENSMUST00000111086.10 436aa) score 8284

001 MEPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLR------------- 047
    |+ +   |||||||||||||||++ | +|||||  | ||||||| |+             
001 MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNE 060

048 -VSHGCVSKILARYNETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRL 106
     ||+||||||| || ||||| | ||||||||| || ||  |  ||+  | ||||||||||
061 NVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRL 120

107 LADGVCDKYNVPSVSSISRILRNKIGNLAQQG 138
    |++|||   |+||||||+|+|||      | |
121 LSEGVCTNDNIPSVSSINRVLRNLASEKQQMG 152