Affine Alignment
 
Alignment between Pax5 (top ENSMUST00000014174.13 391aa) and Pax1 (bottom ENSMUST00000109968.2 446aa) score 10070

010 PRTIRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKIL 069
    || +   +| |||||||||||||||+ +| ||||||  |+||||||||||||||||||||
083 PRAMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKIL 142

070 GRYYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTV 129
     || ||||| || ||||||+| || ||+ | +||+ +| +|||||||||||+ |||   |
143 ARYNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNV 202

130 PSVSSINRIIRTKV------------QQPPNQPVPASSH--------SIVSTGSVTQVSS 169
    ||||||+||+| |+            +||| ||    +|         +  ||+      
203 PSVSSISRILRNKIGSLAQPGPYEASKQPPPQPALPYNHIYQYPYPSPVSPTGTKMGTHP 262

170 VSTDSAG---------SSYSISGILGITSPSADTNKRKRDEGIQESP 207
        |||         |++|+| |||| +    |      ||   ||
263 GVPGSAGHVSIPRSWPSAHSVSNILGIRTFMEQTGALAGSEGAAYSP 309