Affine Alignment
 
Alignment between Pax2 (top ENSMUST00000174490.8 394aa) and Pax1 (bottom ENSMUST00000109968.2 446aa) score 9709

012 AMHPGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 071
    ||   +| |||||||||||||||+ +| ||||||  |+|||||||||||||||||||| |
085 AMEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILAR 144

072 YYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPS 131
    | ||||| || ||||||+| || ||  | +||+ +| +|||||||||||+|+||   |||
145 YNETGSILPGAIGGSKPRVTTPNVVKHIRDYKQGDPGIFAWEIRDRLLADGVCDKYNVPS 204

132 VSSINRIIRTKVQQPFHPTPDGAG-------------------------TGVTAPGHTIV 166
    ||||+||+| |+     | |  |                          ||     |  |
205 VSSISRILRNKIGSLAQPGPYEASKQPPPQPALPYNHIYQYPYPSPVSPTGTKMGTHPGV 264

167 PSTASPPVSSASNDPVGSYSINGILGI----------PRSNG----EKRKREEDVSEGSV 212
    | +|   ||   + |  ++|++ ||||            | |     | +    |+  + 
265 PGSAG-HVSIPRSWP-SAHSVSNILGIRTFMEQTGALAGSEGAAYSPKMEDWAGVNRAAF 322

213 PNGDSQSGVDSLRKHLRADTFTQQQLEALDRVFERPSYPDVFQASEHIKSEQGNEYSLPA 272
    |   + +|++  +  | ||    |   +|  |           |  +  | |   || ||
323 PTSPAVNGLE--KPALEADIKYTQSASSLSAV------GGFLPACAYPASNQHGVYSAPA 374

273 ---LTPG 276
       |+||
375 AGYLSPG 381