Affine Alignment
 
Alignment between Pax9 (top ENSMUST00000153250.8 342aa) and Pax4 (bottom ENSMUST00000031718.13 349aa) score 7087

002 EPAFGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYN 061
    +     ||||||+||||||||   | +||+||  |+||||||| |+||+||||||| || 
003 QDGLSSVNQLGGLFVNGRPLPLDTRQQIVQLAIRGMRPCDISRSLKVSNGCVSKILGRYY 062

062 ETGSILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVPSVS 121
     || + |  |||||||+ || ||  |   |   | +|||||+ +|  +|+| +   ||||
063 RTGVLEPKCIGGSKPRLATPAVVARIAQLKDEYPALFAWEIQHQLCTEGLCTQDKAPSVS 122

122 SISRILR 128
    ||+|+||
123 SINRVLR 129