Affine Alignment
 
Alignment between Pax5 (top ENSMUST00000014174.13 391aa) and Pax8 (bottom ENSMUST00000028355.10 457aa) score 21318

012 TIRTGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGR 071
    +||+||||+||||| ||||||||+|||||||+||||||||||||||||||||||||||||
005 SIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGR 064

072 YYETGSIKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVCDNDTVPS 131
    |||||||+|||||||||||||||||||| +|||||||||||||||||||| |||||||||
065 YYETGSIRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPS 124

132 VSSINRIIRTKVQQPPNQPVP--------ASSHSIVSTGSVTQVSSVSTDSAGSSYSISG 183
    ||||||||||||||| | |+         +  |+++ + +||   |  +|| ||+|||+|
125 VSSINRIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSING 184

184 ILGITSPSADTNKRKRDEGIQESPVPNGHSLPGRDFLRKQMRGDLFTQQQLEVLDRVFER 243
    +|||  |  | |||| |+  |+|   +  |       || +| | |+|  || |+  |||
185 LLGIAQPGND-NKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDTFSQHHLEALECPFER 243

244 QHYSDIFTTTEPIKPEQTTEYSAMASLAGGLDDMKANLTS---------------PTPAD 288
    ||| + + +    | ||      +  |   ||| || |||               |  ||
244 QHYPEAYASPSHTKGEQ--GLYPLPLLNSALDDGKATLTSSNTPLGRNLSTHQTYPVVAD 301

289 ----------------------------------------IGSSVPGPQSYP-------- 300
                                             |+|||   ++|        
302 PHSPFAIKQETPELSSSSSTPSSLSSSAFLDLQQVGSGGPAGASVPPFNAFPHAASVYGQ 361

301 -----IVTGRDLASTTLPGYPPHVPPAGQGSYSAPTLTGMVPGSEFSGSPYSHPQYSSYN 355
         +++||++   ||||||||+| +|||||++  + ||| |||+||+ |||  ||||+
362 FTGQALLSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGSEYSGNAYSHTPYSSYS 421

356 DSWRFPNPGLLGSPYYYSPAARGAAPPAAATAYD 389
    ++|||||  || ||||||  +| +||| +|||+|
422 EAWRFPNSSLLSSPYYYSSTSRPSAPPTSATAFD 455