Affine Alignment
 
Alignment between Pax9 (top ENSMUST00000153250.8 342aa) and Pax8 (bottom ENSMUST00000028355.10 457aa) score 9443

006 GEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARYNETGS 065
    | +||||| ||||||||  +| |||+||  |+|||||||||||||||||||| || ||||
011 GGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETGS 070

066 ILPGAIGGSKPRVTTPTVVKHIRTYKQRDPGIFAWEIRDRLLADGVCDKYNVPSVSSISR 125
    | || ||||||+| || ||+ |  ||+++| +|||||||||||+||||   |||||||+|
071 IRPGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINR 130

126 ILRNKIGNLAQQGHYDSYKQHQPAPQPALPYNHIYSYPSPITAAAAKVPTPPGVPAIPGS 185
    |+| |+    ||                 |+|       |+ +  |     ||   || |
131 IIRTKV----QQ-----------------PFN------LPMDSCVATKSLSPGHTLIPSS 163

186 VALPRTWP------SSHSVTDILGI 204
       |   |      |++|+  +|||
164 AVTPPESPQSDSLGSTYSINGLLGI 188