Gene interactions and pathways from curated databases and text-mining

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PRKCZ — TNF

Pathways - manually collected, often from reviews:

  • OpenBEL Selventa BEL large corpus: PRKCZ → TNF (increases, TNF Activity)
    Evidence: treated BAECs with TNFalpha (0-10 ng/mL; 15 minutes), and PKCzeta activity was measured by phosphorylation at Thr410 (p-PKCzeta) by immunoblotting (Figure 1A-B). There was a significant 3-fold increase in PKCzeta activity
  • OpenBEL Selventa BEL large corpus: PRKCZ → TNF (increases, TNF Activity)
    Evidence: Jung et al. [36] recently investigated TNF-a-induced HIF-1a accumulation and demonstrated that an NFkB-mediated event that is normally associated with inflammation and cell survival caused protein accumulation in normoxic cells. Although the report fails to identify the mechanism of HIF-1a accumulation, it is suggested that this might interfere with the pVHL-mediated HIF-1a degradation process. Further studies support the concept of a pVHL-dependent cytotoxicity to TNF-a in RCC cells [37,38]. In...
  • NCI Pathway Database TNF receptor signaling pathway : Atypical PKCs (PRKCI/PRKCZ) → sTNF-alpha/TNFR1A/TRADD/RIP/TRAF2 complex (TNFRSF1A-TRADD-RIPK1-TRAF2-TNF) (modification, collaborate)
    Sanz et al., EMBO J 1999
    Evidence: physical interaction
  • NCI Pathway Database TNF receptor signaling pathway : Atypical PKCs (PRKCI/PRKCZ) → sTNF-alpha/TNFR1A/TRADD/RIP/TRAF2/p62/Atypical PKCs complex (TNFRSF1A-TRADD-RIPK1-TRAF2-SQSTM1-PRKCI_PRKCZ-TNF) (modification, collaborate)
    Sanz et al., EMBO J 1999
    Evidence: physical interaction
  • NCI Pathway Database TNF receptor signaling pathway : sTNF-alpha/TNFR1A/TRADD/RIP/TRAF2 complex (TNFRSF1A-TRADD-RIPK1-TRAF2-TNF) → sTNF-alpha/TNFR1A/TRADD/RIP/TRAF2/p62/Atypical PKCs complex (TNFRSF1A-TRADD-RIPK1-TRAF2-SQSTM1-PRKCI_PRKCZ-TNF) (modification, collaborate)
    Sanz et al., EMBO J 1999
    Evidence: physical interaction
  • NCI Pathway Database TNF receptor signaling pathway : p62 (SQSTM1) → sTNF-alpha/TNFR1A/TRADD/RIP/TRAF2/p62/Atypical PKCs complex (TNFRSF1A-TRADD-RIPK1-TRAF2-SQSTM1-PRKCI_PRKCZ-TNF) (modification, collaborate)
    Sanz et al., EMBO J 1999
    Evidence: physical interaction
  • NCI Pathway Database TNF receptor signaling pathway : sTNF-alpha/TNFR1A/TRADD/RIP/TRAF2/p62/Atypical PKCs complex (TNFRSF1A-TRADD-RIPK1-TRAF2-SQSTM1-PRKCI_PRKCZ-TNF) → NF kappa B1/RelA complex (NFKB1-RELA) (modification, activates)
    Sanz et al., EMBO J 1999, Leitges et al., Mol Cell 2001
    Evidence: mutant phenotype, assay, physical interaction