Mouse Gene Slc25a21 (ENSMUST00000217690.1) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
  Description: Mus musculus solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 (Slc25a21), transcript variant 2, mRNA. (from RefSeq NM_001167976)
Gencode Transcript: ENSMUST00000217690.1
Gencode Gene: ENSMUSG00000035472.14
Transcript (Including UTRs)
   Position: mm10 chr12:56,713,412-57,160,643 Size: 447,232 Total Exon Count: 11 Strand: -
Coding Region
   Position: mm10 chr12:56,713,813-57,159,244 Size: 445,432 Coding Exon Count: 10 

Page IndexSequence and LinksUniProtKB CommentsPrimersCTDRNA Structure
Protein StructureOther SpeciesGO AnnotationsmRNA DescriptionsOther NamesModel Information
Methods
Data last updated at UCSC: 2019-09-20

+  Sequence and Links to Tools and Databases
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+  Comments and Description Text from UniProtKB
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-  Primer design for this transcript
 

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript


-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -9.9069-0.143 Picture PostScript Text
3' UTR -71.80401-0.179 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

+  Protein Domain and Structure Information
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+  Orthologous Genes in Other Species
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+  Gene Ontology (GO) Annotations with Structured Vocabulary
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-  Descriptions from all associated GenBank mRNAs
  AK167535 - Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530019A21 product:solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21, full insert sequence.
AK045180 - Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130044A15 product:MOTOCHONDRIAL OXODICARBOXYLATE CARRIER homolog [Rattus norvegicus], full insert sequence.
AK041694 - Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630030I10 product:MOTOCHONDRIAL OXODICARBOXYLATE CARRIER homolog [Rattus norvegicus], full insert sequence.
AK162379 - Mus musculus adult male epididymis cDNA, RIKEN full-length enriched library, clone:9230119I19 product:solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21, full insert sequence.
AK036988 - Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930033G19 product:MOTOCHONDRIAL OXODICARBOXYLATE CARRIER homolog [Rattus norvegicus], full insert sequence.
EU180236 - Mus musculus mitochondrial solute carrier family 25 member 21 (Slc25a21) mRNA, complete cds, alternatively spliced; nuclear gene for mitochondrial product.
BC057980 - Mus musculus solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21, mRNA (cDNA clone MGC:67702 IMAGE:5042653), complete cds.
AK044945 - Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130014P16 product:MOTOCHONDRIAL OXODICARBOXYLATE CARRIER homolog [Rattus norvegicus], full insert sequence.

+  Other Names for This Gene
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+  Gene Model Information
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-  Methods, Credits, and Use Restrictions
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