Mouse Gene Pax9 (ENSMUST00000001538.10) from GENCODE VM30
  Description: Mus musculus paired box 9 (Pax9), mRNA. (from RefSeq NM_011041)
RefSeq Summary (NM_011041): This gene is a member of the paired box (PAX) family of transcription factors. Members of this gene family typically contain a paired box domain, an octapeptide, and a paired-type homeodomain. These genes play critical roles during fetal development and cancer growth. Mice lacking this gene exhibit impaired development of organs, musculature and the skeleton, including absent and abnormally developed teeth, and neonatal lethality. Mutations in the human gene are associated with selective tooth agenesis-3. [provided by RefSeq, Sep 2015]. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
Gencode Transcript: ENSMUST00000001538.10
Gencode Gene: ENSMUSG00000001497.19
Transcript (Including UTRs)
   Position: mm39 chr12:56,742,424-56,759,607 Size: 17,184 Total Exon Count: 4 Strand: +
Coding Region
   Position: mm39 chr12:56,742,646-56,756,692 Size: 14,047 Coding Exon Count: 4 

Page IndexSequence and LinksUniProtKB CommentsCTDRNA StructureProtein Structure
Other SpeciesGO AnnotationsmRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2022-06-02 18:33:23

+  Sequence and Links to Tools and Databases
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-  Comments and Description Text from UniProtKB
  ID: Q3V1K1_MOUSE
DESCRIPTION: SubName: Full=Putative uncharacterized protein;
SUBCELLULAR LOCATION: Nucleus (By similarity).
SIMILARITY: Contains 1 paired domain.

+  Comparative Toxicogenomics Database (CTD)
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+  mRNA Secondary Structure of 3' and 5' UTRs
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-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR009057 - Homeodomain-like
IPR001523 - Paired_dom
IPR011991 - WHTH_trsnscrt_rep_DNA-bd

Pfam Domains:
PF00292 - 'Paired box' domain

ModBase Predicted Comparative 3D Structure on Q3V1K1
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+  Orthologous Genes in Other Species
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+  Gene Ontology (GO) Annotations with Structured Vocabulary
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-  Descriptions from all associated GenBank mRNAs
  AK132404 - Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432412B16 product:paired box gene 9, full insert sequence.
AK034985 - Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430070E09 product:paired box gene 9, full insert sequence.
X84000 - M.musculus mRNA for Pax9.
BC005794 - Mus musculus paired box gene 9, mRNA (cDNA clone MGC:11500 IMAGE:3707718), complete cds.
BC006930 - Mus musculus paired box gene 9, mRNA (cDNA clone IMAGE:3599040), with apparent retained intron.
LF203952 - JP 2014500723-A/11455: Polycomb-Associated Non-Coding RNAs.
MA439529 - JP 2018138019-A/11455: Polycomb-Associated Non-Coding RNAs.

+  Other Names for This Gene
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+  Methods, Credits, and Use Restrictions
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