Mouse Gene Pax9 (ENSMUST00000153250.9) from GENCODE VM30
  Description: Nucleus (By similarity). (from UniProt Q3V1K1)
RefSeq Summary (NM_011041): This gene is a member of the paired box (PAX) family of transcription factors. Members of this gene family typically contain a paired box domain, an octapeptide, and a paired-type homeodomain. These genes play critical roles during fetal development and cancer growth. Mice lacking this gene exhibit impaired development of organs, musculature and the skeleton, including absent and abnormally developed teeth, and neonatal lethality. Mutations in the human gene are associated with selective tooth agenesis-3. [provided by RefSeq, Sep 2015]. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
Gencode Transcript: ENSMUST00000153250.9
Gencode Gene: ENSMUSG00000001497.19
Transcript (Including UTRs)
   Position: mm39 chr12:56,738,552-56,759,492 Size: 20,941 Total Exon Count: 5 Strand: +
Coding Region
   Position: mm39 chr12:56,742,646-56,756,692 Size: 14,047 Coding Exon Count: 4 

Page IndexSequence and LinksUniProtKB CommentsCTDRNA StructureProtein Structure
Other SpeciesGO AnnotationsmRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2022-06-02 18:33:23

-  Sequence and Links to Tools and Databases
Genomic Sequence (chr12:56,738,552-56,759,492)mRNA (may differ from genome)Protein (342 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaAlphaFold

+  Comments and Description Text from UniProtKB
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+  Comparative Toxicogenomics Database (CTD)
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+  mRNA Secondary Structure of 3' and 5' UTRs
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+  Protein Domain and Structure Information
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
Protein SequenceProtein Sequence    

+  Gene Ontology (GO) Annotations with Structured Vocabulary
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+  Descriptions from all associated GenBank mRNAs
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-  Other Names for This Gene
  Alternate Gene Symbols: ENSMUST00000153250.1, ENSMUST00000153250.2, ENSMUST00000153250.3, ENSMUST00000153250.4, ENSMUST00000153250.5, ENSMUST00000153250.6, ENSMUST00000153250.7, ENSMUST00000153250.8, Q3V1K1, Q3V1K1_MOUSE, uc288gmx.1, uc288gmx.2
UCSC ID: ENSMUST00000153250.9
RefSeq Accession: NM_011041
Protein: Q3V1K1

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.