Mouse Gene Pax2 (ENSMUST00000174490.8) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)

JavaScript is disabled in your web browser

You must have JavaScript enabled in your web browser to use the Genome Browser

Mouse Gene Pax2 (ENSMUST00000174490.8) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)

Description: Mus musculus paired box 2 (Pax2), transcript variant 7, mRNA. (from RefSeq NM_011037)
Gencode Transcript: ENSMUST00000174490.8
Gencode Gene: ENSMUSG00000004231.15
Transcript (Including UTRs)
Position: mm10 chr19:44,756,045-44,837,851 Size: 81,807 Total Exon Count: 10 Strand: +
Coding Region
Position: mm10 chr19:44,757,394-44,836,027 Size: 78,634 Coding Exon Count: 10

Page Index	Sequence and Links	CTD	RNA Structure	Other Species	mRNA Descriptions
Other Names	Model Information	Methods

Data last updated at UCSC: 2019-09-20

Sequence and Links to Tools and Databases

Genomic Sequence (chr19:44,756,045-44,837,851)			mRNA (may differ from genome)		Protein (394 aa)
Gene Sorter	Genome Browser	Other Species FASTA	VisiGene	Table Schema	AlphaFold
BioGPS	CGAP	Ensembl	Entrez Gene	ExonPrimer	GeneCards
PubMed	Stanford SOURCE	UniProtKB	Wikipedia

Comparative Toxicogenomics Database (CTD)


	Press "+" in the title bar above to open this section.

mRNA Secondary Structure of 3' and 5' UTRs


	Press "+" in the title bar above to open this section.

Orthologous Genes in Other Species

Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.

Human	Rat	Zebrafish	D. melanogaster	C. elegans	S. cerevisiae
No ortholog	Genome Browser	No ortholog	Genome Browser	No ortholog	No ortholog
Gene Details
Gene Sorter
	RGD	Ensembl	Ensembl
	Protein Sequence		Protein Sequence
	Alignment		Alignment

Descriptions from all associated GenBank mRNAs


	LF204748 - JP 2014500723-A/12251: Polycomb-Associated Non-Coding RNAs. BC150484 - Mus musculus paired box gene 2, mRNA (cDNA clone MGC:161329 IMAGE:40142579), complete cds. BC148232 - Mus musculus paired box gene 2, mRNA (cDNA clone MGC:161328 IMAGE:40142573), complete cds. MA440325 - JP 2018138019-A/12251: Polycomb-Associated Non-Coding RNAs. LF201797 - JP 2014500723-A/9300: Polycomb-Associated Non-Coding RNAs. BC031455 - Mus musculus, Similar to proline rich protein 2, clone IMAGE:4235142, mRNA. LF258365 - JP 2014500723-A/65868: Polycomb-Associated Non-Coding RNAs. MA437374 - JP 2018138019-A/9300: Polycomb-Associated Non-Coding RNAs. MA493942 - JP 2018138019-A/65868: Polycomb-Associated Non-Coding RNAs.

Other Names for This Gene


	Press "+" in the title bar above to open this section.

Gene Model Information


	Click here for a detailed description of the fields of the table above.

Methods, Credits, and Use Restrictions


	Press "+" in the title bar above to open this section.