Mouse Gene Pax1 (ENSMUST00000109968.2) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
  Description: Mus musculus paired box 1 (Pax1), mRNA. (from RefSeq NM_008780)
Gencode Transcript: ENSMUST00000109968.2
Gencode Gene: ENSMUSG00000037034.16
Transcript (Including UTRs)
   Position: mm10 chr2:147,364,994-147,375,053 Size: 10,060 Total Exon Count: 5 Strand: +
Coding Region
   Position: mm10 chr2:147,365,048-147,373,805 Size: 8,758 Coding Exon Count: 5 

Page IndexSequence and LinksUniProtKB CommentsCTDRNA StructureProtein Structure
Other SpeciesGO AnnotationsmRNA DescriptionsOther NamesModel InformationMethods
Data last updated at UCSC: 2019-09-20

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr2:147,364,994-147,375,053)mRNA (may differ from genome)Protein (446 aa)
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-  Comments and Description Text from UniProtKB
  ID: PAX1_MOUSE
DESCRIPTION: RecName: Full=Paired box protein Pax-1;
FUNCTION: This protein is a transcriptional activator. It may play a role in the formation of segmented structures of the embryo. May play an important role in the normal development of the vertebral column.
SUBCELLULAR LOCATION: Nucleus.
DISEASE: Note=Undulated (un) homozygous mice exhibits vertebral malformations along the entire rostro-caudal axis. This is due to a single mutation in the paired box region.
SIMILARITY: Contains 1 paired domain.
SEQUENCE CAUTION: Sequence=AAA37793.1; Type=Erroneous gene model prediction; Sequence=AAA39888.1; Type=Erroneous initiation; Note=Translation N-terminally extended;

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene

+  mRNA Secondary Structure of 3' and 5' UTRs
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+  Protein Domain and Structure Information
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+  Orthologous Genes in Other Species
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+  Gene Ontology (GO) Annotations with Structured Vocabulary
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+  Descriptions from all associated GenBank mRNAs
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-  Other Names for This Gene
  Alternate Gene Symbols: A2ALJ9, NM_008780, P09084, Pax-1, PAX1_MOUSE, Q9R2B1, uc008msx.1, uc008msx.2, uc008msx.3, uc008msx.4
UCSC ID: uc008msx.4
RefSeq Accession: NM_008780
Protein: P09084 (aka PAX1_MOUSE)
CCDS: CCDS16835.2

+  Gene Model Information
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+  Methods, Credits, and Use Restrictions
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