Mouse Gene Pax9 (ENSMUST00000153250.9) from GENCODE VM27
  Description: Nucleus (By similarity). (from UniProt Q3V1K1)
RefSeq Summary (NM_011041): This gene is a member of the paired box (PAX) family of transcription factors. Members of this gene family typically contain a paired box domain, an octapeptide, and a paired-type homeodomain. These genes play critical roles during fetal development and cancer growth. Mice lacking this gene exhibit impaired development of organs, musculature and the skeleton, including absent and abnormally developed teeth, and neonatal lethality. Mutations in the human gene are associated with selective tooth agenesis-3. [provided by RefSeq, Sep 2015]. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments.
Gencode Transcript: ENSMUST00000153250.9
Gencode Gene: ENSMUSG00000001497.19
Transcript (Including UTRs)
   Position: mm39 chr12:56,738,552-56,759,492 Size: 20,941 Total Exon Count: 5 Strand: +
Coding Region
   Position: mm39 chr12:56,742,646-56,756,692 Size: 14,047 Coding Exon Count: 4 

Page IndexSequence and LinksUniProtKB CommentsCTDRNA StructureProtein Structure
Other SpeciesGO AnnotationsmRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2021-08-05 19:35:23

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr12:56,738,552-56,759,492)mRNA (may differ from genome)Protein (342 aa)
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaBioGPS
EnsemblExonPrimerGeneCardsMGIPubMedStanford SOURCE
UniProtKB

+  Comments and Description Text from UniProtKB
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+  Comparative Toxicogenomics Database (CTD)
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+  mRNA Secondary Structure of 3' and 5' UTRs
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-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR009057 - Homeodomain-like
IPR001523 - Paired_dom
IPR011991 - WHTH_trsnscrt_rep_DNA-bd

Pfam Domains:
PF00292 - 'Paired box' domain

ModBase Predicted Comparative 3D Structure on Q3V1K1
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+  Orthologous Genes in Other Species
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+  Gene Ontology (GO) Annotations with Structured Vocabulary
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+  Descriptions from all associated GenBank mRNAs
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+  Other Names for This Gene
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+  Methods, Credits, and Use Restrictions
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