Mouse Gene Pax7 (ENSMUST00000030508.13) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)

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Mouse Gene Pax7 (ENSMUST00000030508.13) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)

Description: Mus musculus paired box 7 (Pax7), mRNA. (from RefSeq NM_011039)
Gencode Transcript: ENSMUST00000030508.13
Gencode Gene: ENSMUSG00000028736.13
Transcript (Including UTRs)
Position: mm10 chr4:139,737,062-139,833,528 Size: 96,467 Total Exon Count: 9 Strand: -
Coding Region
Position: mm10 chr4:139,740,787-139,832,911 Size: 92,125 Coding Exon Count: 9

Page Index	Sequence and Links	UniProtKB Comments	CTD	RNA Structure	Protein Structure
Other Species	GO Annotations	mRNA Descriptions	Other Names	Model Information	Methods

Data last updated at UCSC: 2019-09-20

Sequence and Links to Tools and Databases


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Comments and Description Text from UniProtKB


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Comparative Toxicogenomics Database (CTD)


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mRNA Secondary Structure of 3' and 5' UTRs

Region	Fold Energy	Bases	Energy/Base	Display As
5' UTR	-288.10	617	-0.467	Picture	PostScript	Text
3' UTR	-1283.02	3725	-0.344	Picture	PostScript	Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

Protein Domain and Structure Information


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Orthologous Genes in Other Species


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Gene Ontology (GO) Annotations with Structured Vocabulary


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Descriptions from all associated GenBank mRNAs


	AK133693 - Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330440B08 product:paired box gene 7, full insert sequence. AF254422 - Mus musculus paired box transcription factor PAX7 (Pax7) mRNA, complete cds. BC156884 - Synthetic construct Mus musculus clone IMAGE:100062729, MGC:190944 paired box gene 7 (Pax7) mRNA, encodes complete protein. BC156072 - Synthetic construct Mus musculus clone IMAGE:100062368, MGC:190857 paired box gene 7 (Pax7) mRNA, encodes complete protein. U20792 - Mus musculus Pax7 mRNA, partial cds.

Other Names for This Gene


	Alternate Gene Symbols: NM_011039, P47239, Pax-7, PAX7_MOUSE, Q9ES16, uc008vms.1, uc008vms.2 UCSC ID: uc008vms.2 RefSeq Accession: NM_011039 Protein: P47239 (aka PAX7_MOUSE) CCDS: CCDS18850.1

Gene Model Information


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Methods, Credits, and Use Restrictions


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