Mouse Gene Slc25a21 (ENSMUST00000044634.11) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
  Description: Mus musculus solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21 (Slc25a21), transcript variant 1, mRNA. (from RefSeq NM_172577)
Gencode Transcript: ENSMUST00000044634.11
Gencode Gene: ENSMUSG00000035472.14
Transcript (Including UTRs)
   Position: mm10 chr12:56,712,634-57,197,472 Size: 484,839 Total Exon Count: 10 Strand: -
Coding Region
   Position: mm10 chr12:56,713,813-57,196,939 Size: 483,127 Coding Exon Count: 10 

Page IndexSequence and LinksUniProtKB CommentsCTDRNA StructureProtein Structure
Other SpeciesGO AnnotationsmRNA DescriptionsPathwaysOther NamesModel Information
Methods
Data last updated at UCSC: 2019-09-20

+  Sequence and Links to Tools and Databases
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+  Comments and Description Text from UniProtKB
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+  Comparative Toxicogenomics Database (CTD)
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-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -185.80533-0.349 Picture PostScript Text
3' UTR -220.401179-0.187 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

+  Protein Domain and Structure Information
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+  Orthologous Genes in Other Species
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+  Gene Ontology (GO) Annotations with Structured Vocabulary
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-  Descriptions from all associated GenBank mRNAs
  AK167535 - Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530019A21 product:solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21, full insert sequence.
AK045180 - Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130044A15 product:MOTOCHONDRIAL OXODICARBOXYLATE CARRIER homolog [Rattus norvegicus], full insert sequence.
AK041694 - Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630030I10 product:MOTOCHONDRIAL OXODICARBOXYLATE CARRIER homolog [Rattus norvegicus], full insert sequence.
AK162379 - Mus musculus adult male epididymis cDNA, RIKEN full-length enriched library, clone:9230119I19 product:solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21, full insert sequence.
AK036988 - Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930033G19 product:MOTOCHONDRIAL OXODICARBOXYLATE CARRIER homolog [Rattus norvegicus], full insert sequence.
EU180236 - Mus musculus mitochondrial solute carrier family 25 member 21 (Slc25a21) mRNA, complete cds, alternatively spliced; nuclear gene for mitochondrial product.
BC057980 - Mus musculus solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21, mRNA (cDNA clone MGC:67702 IMAGE:5042653), complete cds.
AK044945 - Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130014P16 product:MOTOCHONDRIAL OXODICARBOXYLATE CARRIER homolog [Rattus norvegicus], full insert sequence.
AK171801 - Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830011M21 product:solute carrier family 25 (mitochondrial oxodicarboxylate carrier), member 21, full insert sequence.

-  Biochemical and Signaling Pathways
  Reactome (by CSHL, EBI, and GO)

Protein Q8BZ09 (Reactome details) participates in the following event(s):

R-MMU-372480 2-oxoglutarate [mitochondrial matrix] + 2-oxoadipate [cytosol] <=> 2-oxoglutarate [cytosol] + 2-oxoadipate [mitochondrial matrix]
R-MMU-71064 Lysine catabolism
R-MMU-6788656 Histidine, lysine, phenylalanine, tyrosine, proline and tryptophan catabolism
R-MMU-71291 Metabolism of nitrogenous molecules
R-MMU-1430728 Metabolism

-  Other Names for This Gene
  Alternate Gene Symbols: NM_172577, Odc, ODC_MOUSE, Q8BY72, Q8BZ09, uc007npj.1, uc007npj.2
UCSC ID: uc007npj.2
RefSeq Accession: NM_172577
Protein: Q8BZ09 (aka ODC_MOUSE)
CCDS: CCDS25925.1

+  Gene Model Information
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-  Methods, Credits, and Use Restrictions
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