Mouse Gene 4932438A13Rik (ENSMUST00000057272.15) from GENCODE VM30
  Description: Mus musculus RIKEN cDNA 4932438A13 gene (4932438A13Rik), mRNA. (from RefSeq NM_172679)
Gencode Transcript: ENSMUST00000057272.15
Gencode Gene: ENSMUSG00000037270.19
Transcript (Including UTRs)
   Position: mm39 chr3:36,917,255-37,107,182 Size: 189,928 Total Exon Count: 86 Strand: +
Coding Region
   Position: mm39 chr3:36,924,177-37,106,689 Size: 182,513 Coding Exon Count: 84 

Page IndexSequence and LinksUniProtKB CommentsRNA StructureProtein StructureOther Species
GO AnnotationsmRNA DescriptionsOther NamesMethods
Data last updated at UCSC: 2022-06-02 18:33:23

-  Sequence and Links to Tools and Databases
 
Genomic Sequence (chr3:36,917,255-37,107,182)mRNA (may differ from genome)Protein (5005 aa)
Gene SorterGenome BrowserOther Species FASTATable SchemaAlphaFoldBioGPS
EnsemblEntrez GeneExonPrimerGeneCardsMGIPubMed
Stanford SOURCEUniProtKB

-  Comments and Description Text from UniProtKB
  ID: K1109_MOUSE
DESCRIPTION: RecName: Full=Uncharacterized protein KIAA1109; AltName: Full=Fragile site-associated protein homolog;
SUBCELLULAR LOCATION: Membrane; Single-pass membrane protein (Potential).
TISSUE SPECIFICITY: Highly expressed in testis and ovary. Weakly or not expressed in other tissues.
DEVELOPMENTAL STAGE: Expressed during spermatogenesis and adipogenesis.
SEQUENCE CAUTION: Sequence=AAH27125.3; Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=AAH79623.1; Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=BAC31019.1; Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=BAC31019.1; Type=Frameshift; Positions=4985; Sequence=BAC35104.1; Type=Erroneous initiation; Note=Translation N-terminally extended; Sequence=BAD90190.1; Type=Erroneous initiation; Note=Translation N-terminally shortened; Sequence=CAM28060.1; Type=Erroneous gene model prediction; Sequence=CAM28069.1; Type=Erroneous gene model prediction;

-  mRNA Secondary Structure of 3' and 5' UTRs
 
RegionFold EnergyBasesEnergy/Base
Display As
5' UTR -124.80372-0.335 Picture PostScript Text
3' UTR -93.00493-0.189 Picture PostScript Text

The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.

-  Protein Domain and Structure Information
  InterPro Domains: Graphical view of domain structure
IPR018863 - Fragile_site-assoc_C

Pfam Domains:
PF10479 - Fragile site-associated protein C-terminus

ModBase Predicted Comparative 3D Structure on A2AAE1
FrontTopSide
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-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
Genome BrowserGenome BrowserNo orthologNo orthologNo orthologNo ortholog
Gene Details     
Gene Sorter     
GenBankRGD    
Protein SequenceProtein Sequence    
AlignmentAlignment    

-  Gene Ontology (GO) Annotations with Structured Vocabulary
  Molecular Function:
GO:0003674 molecular_function

Biological Process:
GO:0001558 regulation of cell growth
GO:0006629 lipid metabolic process
GO:0007283 spermatogenesis
GO:0019915 lipid storage
GO:0045444 fat cell differentiation
GO:0051647 nucleus localization
GO:0060612 adipose tissue development

Cellular Component:
GO:0005634 nucleus
GO:0016020 membrane
GO:0016021 integral component of membrane


-  Descriptions from all associated GenBank mRNAs
  LF193893 - JP 2014500723-A/1396: Polycomb-Associated Non-Coding RNAs.
MA429470 - JP 2018138019-A/1396: Polycomb-Associated Non-Coding RNAs.
AK030086 - Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932438A13 product:hypothetical protein, full insert sequence.
AK220265 - Mus musculus mRNA for mKIAA1371 protein.
AK028716 - Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732443H21 product:hypothetical protein, full insert sequence.
AK148181 - Mus musculus B16 F10Y cells cDNA, RIKEN full-length enriched library, clone:G370042E08 product:hypothetical protein, full insert sequence.
BC034738 - Mus musculus RIKEN cDNA 4932438A13 gene, mRNA (cDNA clone IMAGE:4935171), partial cds.
AK173100 - Mus musculus mRNA for mKIAA1109 protein.
BC079623 - Mus musculus RIKEN cDNA 4932438A13 gene, mRNA (cDNA clone IMAGE:30536256), complete cds.
AK052702 - Mus musculus 0 day neonate kidney cDNA, RIKEN full-length enriched library, clone:D630029K19 product:hypothetical Serine-rich region containing protein, full insert sequence.
AK041642 - Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630026H15 product:hypothetical protein, full insert sequence.
BC027125 - Mus musculus RIKEN cDNA 4932438A13 gene, mRNA (cDNA clone IMAGE:5360799), complete cds.
AK164468 - Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230049B15 product:unclassifiable, full insert sequence.
AK088301 - Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430010K12 product:unclassifiable, full insert sequence.
AK172264 - Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830111F24 product:hypothetical protein, full insert sequence.
AK041411 - Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630007M06 product:hypothetical protein, full insert sequence.
BC064036 - Mus musculus RIKEN cDNA 4932438A13 gene, mRNA (cDNA clone IMAGE:1379891).
LF266894 - JP 2014500723-A/74397: Polycomb-Associated Non-Coding RNAs.
MA502471 - JP 2018138019-A/74397: Polycomb-Associated Non-Coding RNAs.
LF266895 - JP 2014500723-A/74398: Polycomb-Associated Non-Coding RNAs.
MA502472 - JP 2018138019-A/74398: Polycomb-Associated Non-Coding RNAs.
LF266896 - JP 2014500723-A/74399: Polycomb-Associated Non-Coding RNAs.
MA502473 - JP 2018138019-A/74399: Polycomb-Associated Non-Coding RNAs.
LF266897 - JP 2014500723-A/74400: Polycomb-Associated Non-Coding RNAs.
MA502474 - JP 2018138019-A/74400: Polycomb-Associated Non-Coding RNAs.
LF266898 - JP 2014500723-A/74401: Polycomb-Associated Non-Coding RNAs.
MA502475 - JP 2018138019-A/74401: Polycomb-Associated Non-Coding RNAs.
LF266905 - JP 2014500723-A/74408: Polycomb-Associated Non-Coding RNAs.
MA502482 - JP 2018138019-A/74408: Polycomb-Associated Non-Coding RNAs.
LF266906 - JP 2014500723-A/74409: Polycomb-Associated Non-Coding RNAs.
MA502483 - JP 2018138019-A/74409: Polycomb-Associated Non-Coding RNAs.
LF266909 - JP 2014500723-A/74412: Polycomb-Associated Non-Coding RNAs.
MA502486 - JP 2018138019-A/74412: Polycomb-Associated Non-Coding RNAs.
LF266910 - JP 2014500723-A/74413: Polycomb-Associated Non-Coding RNAs.
MA502487 - JP 2018138019-A/74413: Polycomb-Associated Non-Coding RNAs.
LF266915 - JP 2014500723-A/74418: Polycomb-Associated Non-Coding RNAs.
MA502492 - JP 2018138019-A/74418: Polycomb-Associated Non-Coding RNAs.
LF266916 - JP 2014500723-A/74419: Polycomb-Associated Non-Coding RNAs.
MA502493 - JP 2018138019-A/74419: Polycomb-Associated Non-Coding RNAs.
LF266920 - JP 2014500723-A/74423: Polycomb-Associated Non-Coding RNAs.
MA502497 - JP 2018138019-A/74423: Polycomb-Associated Non-Coding RNAs.
LF266921 - JP 2014500723-A/74424: Polycomb-Associated Non-Coding RNAs.
MA502498 - JP 2018138019-A/74424: Polycomb-Associated Non-Coding RNAs.
LF266922 - JP 2014500723-A/74425: Polycomb-Associated Non-Coding RNAs.
MA502499 - JP 2018138019-A/74425: Polycomb-Associated Non-Coding RNAs.
LF266923 - JP 2014500723-A/74426: Polycomb-Associated Non-Coding RNAs.
MA502500 - JP 2018138019-A/74426: Polycomb-Associated Non-Coding RNAs.
LF266924 - JP 2014500723-A/74427: Polycomb-Associated Non-Coding RNAs.
MA502501 - JP 2018138019-A/74427: Polycomb-Associated Non-Coding RNAs.
LF266925 - JP 2014500723-A/74428: Polycomb-Associated Non-Coding RNAs.
MA502502 - JP 2018138019-A/74428: Polycomb-Associated Non-Coding RNAs.
LF266926 - JP 2014500723-A/74429: Polycomb-Associated Non-Coding RNAs.
MA502503 - JP 2018138019-A/74429: Polycomb-Associated Non-Coding RNAs.
LF266934 - JP 2014500723-A/74437: Polycomb-Associated Non-Coding RNAs.
MA502511 - JP 2018138019-A/74437: Polycomb-Associated Non-Coding RNAs.
LF266939 - JP 2014500723-A/74442: Polycomb-Associated Non-Coding RNAs.
MA502516 - JP 2018138019-A/74442: Polycomb-Associated Non-Coding RNAs.
LF266943 - JP 2014500723-A/74446: Polycomb-Associated Non-Coding RNAs.
MA502520 - JP 2018138019-A/74446: Polycomb-Associated Non-Coding RNAs.
LF266944 - JP 2014500723-A/74447: Polycomb-Associated Non-Coding RNAs.
MA502521 - JP 2018138019-A/74447: Polycomb-Associated Non-Coding RNAs.
LF266949 - JP 2014500723-A/74452: Polycomb-Associated Non-Coding RNAs.
MA502526 - JP 2018138019-A/74452: Polycomb-Associated Non-Coding RNAs.
LF266950 - JP 2014500723-A/74453: Polycomb-Associated Non-Coding RNAs.
MA502527 - JP 2018138019-A/74453: Polycomb-Associated Non-Coding RNAs.
AK046867 - Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830039D19 product:unclassifiable, full insert sequence.
AK085090 - Mus musculus 13 days embryo lung cDNA, RIKEN full-length enriched library, clone:D430035F02 product:unclassifiable, full insert sequence.
LF266951 - JP 2014500723-A/74454: Polycomb-Associated Non-Coding RNAs.
MA502528 - JP 2018138019-A/74454: Polycomb-Associated Non-Coding RNAs.
LF266952 - JP 2014500723-A/74455: Polycomb-Associated Non-Coding RNAs.
MA502529 - JP 2018138019-A/74455: Polycomb-Associated Non-Coding RNAs.
AK086976 - Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030017C01 product:Hypothetical serine-rich region containing protein, full insert sequence.
LF266954 - JP 2014500723-A/74457: Polycomb-Associated Non-Coding RNAs.
MA502531 - JP 2018138019-A/74457: Polycomb-Associated Non-Coding RNAs.
LF266955 - JP 2014500723-A/74458: Polycomb-Associated Non-Coding RNAs.
MA502532 - JP 2018138019-A/74458: Polycomb-Associated Non-Coding RNAs.
LF266957 - JP 2014500723-A/74460: Polycomb-Associated Non-Coding RNAs.
MA502534 - JP 2018138019-A/74460: Polycomb-Associated Non-Coding RNAs.
LF266958 - JP 2014500723-A/74461: Polycomb-Associated Non-Coding RNAs.
MA502535 - JP 2018138019-A/74461: Polycomb-Associated Non-Coding RNAs.
LF266959 - JP 2014500723-A/74462: Polycomb-Associated Non-Coding RNAs.
MA502536 - JP 2018138019-A/74462: Polycomb-Associated Non-Coding RNAs.
LF266961 - JP 2014500723-A/74464: Polycomb-Associated Non-Coding RNAs.
MA502538 - JP 2018138019-A/74464: Polycomb-Associated Non-Coding RNAs.
LF266962 - JP 2014500723-A/74465: Polycomb-Associated Non-Coding RNAs.
MA502539 - JP 2018138019-A/74465: Polycomb-Associated Non-Coding RNAs.
LF266963 - JP 2014500723-A/74466: Polycomb-Associated Non-Coding RNAs.
MA502540 - JP 2018138019-A/74466: Polycomb-Associated Non-Coding RNAs.
BC024954 - Mus musculus RIKEN cDNA 4932438A13 gene, mRNA (cDNA clone IMAGE:4953237).
AK134811 - Mus musculus adult male medulla oblongata cDNA, RIKEN full-length enriched library, clone:6330574L04 product:Hypothetical serine-rich region containing protein homolog [Mus musculus], full insert sequence.
LF266964 - JP 2014500723-A/74467: Polycomb-Associated Non-Coding RNAs.
MA502541 - JP 2018138019-A/74467: Polycomb-Associated Non-Coding RNAs.
AK051829 - Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230005L08 product:hypothetical protein, full insert sequence.
LF266965 - JP 2014500723-A/74468: Polycomb-Associated Non-Coding RNAs.
MA502542 - JP 2018138019-A/74468: Polycomb-Associated Non-Coding RNAs.
LF266966 - JP 2014500723-A/74469: Polycomb-Associated Non-Coding RNAs.
MA502543 - JP 2018138019-A/74469: Polycomb-Associated Non-Coding RNAs.
LF266969 - JP 2014500723-A/74472: Polycomb-Associated Non-Coding RNAs.
MA502546 - JP 2018138019-A/74472: Polycomb-Associated Non-Coding RNAs.
LF266970 - JP 2014500723-A/74473: Polycomb-Associated Non-Coding RNAs.
MA502547 - JP 2018138019-A/74473: Polycomb-Associated Non-Coding RNAs.
LF266971 - JP 2014500723-A/74474: Polycomb-Associated Non-Coding RNAs.
MA502548 - JP 2018138019-A/74474: Polycomb-Associated Non-Coding RNAs.
LF266972 - JP 2014500723-A/74475: Polycomb-Associated Non-Coding RNAs.
MA502549 - JP 2018138019-A/74475: Polycomb-Associated Non-Coding RNAs.

-  Other Names for This Gene
  Alternate Gene Symbols: A2AAD2, A2AAD4, A2AAE1, E9Q376, ENSMUST00000057272.1, ENSMUST00000057272.10, ENSMUST00000057272.11, ENSMUST00000057272.12, ENSMUST00000057272.13, ENSMUST00000057272.14, ENSMUST00000057272.2, ENSMUST00000057272.3, ENSMUST00000057272.4, ENSMUST00000057272.5, ENSMUST00000057272.6, ENSMUST00000057272.7, ENSMUST00000057272.8, ENSMUST00000057272.9, Fsa, K1109_MOUSE, Kiaa1109, Kiaa1371, NM_172679, Q05BP8, Q3UG08, Q3UYB7, Q571C4, Q69ZR8, Q6AXD9, Q8BWF1, Q8BY77, Q8CEA4, Q8R0A8, uc008pab.1, uc008pab.2, uc008pab.3
UCSC ID: ENSMUST00000057272.15
RefSeq Accession: NM_172679
Protein: A2AAE1 (aka K1109_MOUSE)

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.