Mouse Gene Hhex (ENSMUST00000237452.1) from GENCODE VM23 Comprehensive Transcript Set (only Basic displayed by default)
  Description: Hhex (from geneSymbol)
Gencode Transcript: ENSMUST00000237452.1
Gencode Gene: ENSMUSG00000024986.12
Transcript (Including UTRs)
   Position: mm10 chr19:37,434,810-37,438,717 Size: 3,908 Total Exon Count: 1 Strand: +

Page IndexSequence and LinksPrimersCTDOther SpeciesmRNA Descriptions
Other NamesModel InformationMethods
Data last updated at UCSC: 2019-09-20

-  Sequence and Links to Tools and Databases
Genomic Sequence (chr19:37,434,810-37,438,717)mRNA (may differ from genome)No protein
Gene SorterGenome BrowserOther Species FASTAVisiGeneTable SchemaEnsembl

-  Primer design for this transcript

Primer3Plus can design qPCR Primers that straddle exon-exon-junctions, which amplify only cDNA, not genomic DNA.
Click here to load the transcript sequence and exon structure into Primer3Plus

Exonprimer can design one pair of Sanger sequencing primers around every exon, located in non-genic sequence.
Click here to open Exonprimer with this transcript

To design primers for a non-coding sequence, zoom to a region of interest and select from the drop-down menu: View > In External Tools > Primer3

-  Comparative Toxicogenomics Database (CTD)
  The following chemicals interact with this gene
  • D013749 Tetrachlorodibenzodioxin
  • D002635 Chenodeoxycholic Acid
  • C029141 2,2,5,7,8-pentamethyl-1-hydroxychroman
  • C548651 2-(1'H-indolo-3'-carbonyl)thiazole-4-carboxylic acid methyl ester
  • C532162 2-(1H-indazol-4-yl)-6-(4-methanesulfonylpiperazin-1-ylmethyl)-4-morpholin-4-ylthieno(3,2-d)pyrimidine
  • C009505 4,4'-diaminodiphenylmethane
  • D000079 Acetaldehyde
  • D000082 Acetaminophen
  • D000643 Ammonium Chloride
  • D001554 Benzene
          more ... click here to view the complete list

-  Orthologous Genes in Other Species
  Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
HumanRatZebrafishD. melanogasterC. elegansS. cerevisiae
No orthologNo orthologNo orthologNo orthologNo orthologNo ortholog

-  Descriptions from all associated GenBank mRNAs
  AK158086 - Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930027L01 product:hematopoietically expressed homeobox, full insert sequence.
AK014111 - Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110032E02 product:hematopoietically expressed homeobox, full insert sequence.
AK149553 - Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730037D09 product:hematopoietically expressed homeobox, full insert sequence.
AK033664 - Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130211K13 product:HOMEOBOX PROTEIN PRH (HOMEOBOX PROTEIN HEX), full insert sequence.
BC057986 - Mus musculus hematopoietically expressed homeobox, mRNA (cDNA clone MGC:68214 IMAGE:5124938), complete cds.

-  Other Names for This Gene
  Alternate Gene Symbols: uc294hlq.1
UCSC ID: uc294hlq.1

-  Gene Model Information
  Click here for a detailed description of the fields of the table above.

-  Methods, Credits, and Use Restrictions
  Click here for details on how this gene model was made and data restrictions if any.