Human Gene MIDEAS (uc001xos.3)
Description: Homo sapiens ELM2 and Myb/SANT-like domain containing 1 (MIDEAS), transcript variant 2, mRNA.
Transcript (Including UTRs)
Position: hg19 chr14:74,181,825-74,195,879 Size: 14,055 Total Exon Count: 7 Strand: -
Coding Region
Position: hg19 chr14:74,186,004-74,193,632 Size: 7,629 Coding Exon Count: 7
Data last updated at UCSC: 2013-06-14
Sequence and Links to Tools and Databases
Primer design for this transcript
Common Gene Haplotype Alleles
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RNA-Seq Expression Data from GTEx (53 Tissues, 570 Donors)
Microarray Expression Data
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mRNA Secondary Structure of 3' and 5' UTRs
The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse Rat Zebrafish D. melanogaster C. elegans S. cerevisiae
No ortholog No ortholog No ortholog No ortholog No ortholog No ortholog
Gene Details
Gene Sorter
Descriptions from all associated GenBank mRNAs
BC052976 - Homo sapiens chromosome 14 open reading frame 43, mRNA (cDNA clone IMAGE:6193955), with apparent retained intron.AB385229 - Synthetic construct DNA, clone: pF1KB9471, Homo sapiens C14orf43 gene for C14orf43 protein, complete cds, without stop codon, in Flexi system.BC006511 - Homo sapiens chromosome 14 open reading frame 43, mRNA (cDNA clone IMAGE:3010441), partial cds.BC025330 - Homo sapiens chromosome 14 open reading frame 43, mRNA (cDNA clone IMAGE:4111658), partial cds.BC006451 - Homo sapiens, clone IMAGE:3960432, mRNA.BC003121 - Homo sapiens, clone IMAGE:3357079, mRNA.BC015668 - Homo sapiens chromosome 14 open reading frame 43, mRNA (cDNA clone IMAGE:4328688), partial cds.BC009202 - Homo sapiens chromosome 14 open reading frame 43, mRNA (cDNA clone IMAGE:3614143), partial cds.AK127785 - Homo sapiens cDNA FLJ45886 fis, clone OCBBF3021361.BC105996 - Homo sapiens cDNA clone IMAGE:4776214.AK024978 - Homo sapiens cDNA: FLJ21325 fis, clone COL02408, highly similar to AF147723 Homo sapiens lipopolysaccharide specific response-68 protein (LSR68) mRNA.BC036475 - Homo sapiens cDNA clone IMAGE:5259265.BC047633 - Homo sapiens chromosome 14 open reading frame 43, mRNA (cDNA clone IMAGE:4818554).BC034345 - Homo sapiens cDNA clone IMAGE:4750481.BC062730 - Homo sapiens cDNA clone IMAGE:6672804, partial cds.AK095434 - Homo sapiens cDNA FLJ38115 fis, clone D3OST2002452.LF209593 - JP 2014500723-A/17096: Polycomb-Associated Non-Coding RNAs.LF329958 - JP 2014500723-A/137461: Polycomb-Associated Non-Coding RNAs.JD311795 - Sequence 292819 from Patent EP1572962.JD476726 - Sequence 457750 from Patent EP1572962.JD069739 - Sequence 50763 from Patent EP1572962.JD379671 - Sequence 360695 from Patent EP1572962.JD560691 - Sequence 541715 from Patent EP1572962.JD119789 - Sequence 100813 from Patent EP1572962.JD371277 - Sequence 352301 from Patent EP1572962.JD414484 - Sequence 395508 from Patent EP1572962.JD514440 - Sequence 495464 from Patent EP1572962.JD542915 - Sequence 523939 from Patent EP1572962.JD560952 - Sequence 541976 from Patent EP1572962.JD165228 - Sequence 146252 from Patent EP1572962.LF329959 - JP 2014500723-A/137462: Polycomb-Associated Non-Coding RNAs.DL492052 - Novel nucleic acids.DL490601 - Novel nucleic acids.AK308604 - Homo sapiens cDNA, FLJ98645.JD479949 - Sequence 460973 from Patent EP1572962.MA565535 - JP 2018138019-A/137461: Polycomb-Associated Non-Coding RNAs.MA565536 - JP 2018138019-A/137462: Polycomb-Associated Non-Coding RNAs.MA445170 - JP 2018138019-A/17096: Polycomb-Associated Non-Coding RNAs.AK021512 - Homo sapiens cDNA FLJ11450 fis, clone HEMBA1001432.AK090424 - Homo sapiens mRNA for FLJ00335 protein.JD519887 - Sequence 500911 from Patent EP1572962.JD064165 - Sequence 45189 from Patent EP1572962.JD393152 - Sequence 374176 from Patent EP1572962.JD369144 - Sequence 350168 from Patent EP1572962.
Other Names for This Gene
Alternate Gene Symbols: BC052976, ELMSAN1UCSC ID: uc001xos.3RefSeq Accession: NM_001043318
Gene Model Information
category:
coding
nonsense-mediated-decay:
no
RNA accession:
BC052976.1
exon count:
7 CDS single in 3' UTR:
no
RNA size:
5338
ORF size:
933 CDS single in intron:
no
Alignment % ID:
99.91
txCdsPredict score:
758.00 frame shift in genome:
no
% Coverage:
99.51
has start codon:
yes
stop codon in genome:
no
# of Alignments:
1
has end codon:
yes
retained intron:
yes
# AT/AC introns
0
selenocysteine:
no
end bleed into intron:
6387 # strange splices:
0
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Methods, Credits, and Use Restrictions
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for details on how this gene model was made and data restrictions if any.