The RNAfold program from the Vienna RNA Package is used to perform the secondary structure predictions and folding calculations. The estimated folding energy is in kcal/mol. The more negative the energy, the more secondary structure the RNA is likely to have.
Orthologous Genes in Other Species
Orthologies between human, mouse, and rat are computed by taking the best BLASTP hit, and filtering out non-syntenic hits. For more distant species reciprocal-best BLASTP hits are used. Note that the absence of an ortholog in the table below may reflect incomplete annotations in the other species rather than a true absence of the orthologous gene.
Mouse
Rat
Zebrafish
D. melanogaster
C. elegans
S. cerevisiae
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
No ortholog
Descriptions from all associated GenBank mRNAs
AK127124 - Homo sapiens cDNA FLJ45181 fis, clone BRAWH3047644, highly similar to Homo sapiens Rho guanine nucleotide exchange factor (GEF) 4 (ARHGEF4). JD324769 - Sequence 305793 from Patent EP1572962. LF205178 - JP 2014500723-A/12681: Polycomb-Associated Non-Coding RNAs. JD384582 - Sequence 365606 from Patent EP1572962. JD338008 - Sequence 319032 from Patent EP1572962. JD387218 - Sequence 368242 from Patent EP1572962. JD260140 - Sequence 241164 from Patent EP1572962. JD309535 - Sequence 290559 from Patent EP1572962. JD090193 - Sequence 71217 from Patent EP1572962. LF317291 - JP 2014500723-A/124794: Polycomb-Associated Non-Coding RNAs. JD387405 - Sequence 368429 from Patent EP1572962. JD367006 - Sequence 348030 from Patent EP1572962. JD134920 - Sequence 115944 from Patent EP1572962. JD495049 - Sequence 476073 from Patent EP1572962. JD554852 - Sequence 535876 from Patent EP1572962. JD297054 - Sequence 278078 from Patent EP1572962. MA440755 - JP 2018138019-A/12681: Polycomb-Associated Non-Coding RNAs. MA552868 - JP 2018138019-A/124794: Polycomb-Associated Non-Coding RNAs.