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UCSC Genes

ZSCAN10 (uc002ctv.1) at chr16:3138895-3142861 - Homo sapiens zinc finger and SCAN domain containing 10 (ZSCAN10), mRNA.
ZSCAN10 (uc002cty.1) at chr16:3138895-3149293 - Homo sapiens zinc finger and SCAN domain containing 10 (ZSCAN10), mRNA.
ZSCAN10 (uc002ctx.1) at chr16:3138895-3143237 - Homo sapiens zinc finger and SCAN domain containing 10 (ZSCAN10), mRNA.
ZSCAN10 (uc002ctw.1) at chr16:3138895-3142861 - Homo sapiens zinc finger and SCAN domain containing 10 (ZSCAN10), mRNA.
POU5F1 (uc003nsv.3) at chr6:31132114-31138451 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011fby.2) at chr6_cox_hap2:2646867-2653222 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011gak.2) at chr6_dbb_hap3:2429238-2435593 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011gwl.2) at chr6_mann_hap4:2480458-2486814 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011how.2) at chr6_mcf_hap5:2514037-2520393 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011imj.2) at chr6_qbl_hap6:2427966-2434320 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc011jht.2) at chr6_ssto_hap7:2467051-2473404 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 1, mRNA.
POU5F1 (uc021yuj.1) at chr6:31132114-31134615 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc003nsu.3) at chr6:31132114-31134615 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021zkv.1) at chr6_cox_hap2:2646867-2649380 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011fbx.2) at chr6_cox_hap2:2646867-2649380 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021znh.1) at chr6_dbb_hap3:2429238-2431751 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011gaj.2) at chr6_dbb_hap3:2429238-2431751 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021zpb.1) at chr6_mann_hap4:2480458-2482971 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011gwk.2) at chr6_mann_hap4:2480458-2482971 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021zro.1) at chr6_mcf_hap5:2514037-2516550 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011hov.2) at chr6_mcf_hap5:2514037-2516550 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021ztw.1) at chr6_qbl_hap6:2427966-2430479 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011imi.2) at chr6_qbl_hap6:2427966-2430479 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
POU5F1 (uc021zwd.1) at chr6_ssto_hap7:2467051-2469564 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 3, mRNA.
POU5F1 (uc011jhs.2) at chr6_ssto_hap7:2467051-2469564 - Homo sapiens POU class 5 homeobox 1 (POU5F1), transcript variant 2, mRNA.
SOX2 (uc003fkx.3) at chr3:181429712-181432223 - Homo sapiens SRY (sex determining region Y)-box 2 (SOX2), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_032805.2 at chr16:3138891-3149318
NM_001282416.1 at chr16:3138891-3149318
NM_001282415.1 at chr16:3138891-3149318

RefSeq Genes

ZSCAN10 at chr16:3138891-3149295 - (NM_001282416) zinc finger and SCAN domain-containing protein 10 isoform 3
ZSCAN10 at chr16:3138891-3149295 - (NM_001282415) zinc finger and SCAN domain-containing protein 10 isoform 2
ZSCAN10 at chr16:3138891-3149295 - (NM_001365272) zinc finger and SCAN domain-containing protein 10 isoform 4
ZSCAN10 at chr16:3138891-3149295 - (NM_001365273) zinc finger and SCAN domain-containing protein 10 isoform 2
ZSCAN10 at chr16:3138891-3149295 - (NM_032805) zinc finger and SCAN domain-containing protein 10 isoform 1

Non-Human RefSeq Genes

Zscan10 at chr16:3139063-3149313 - (NM_001106981) zinc finger and SCAN domain-containing protein 10
ZSCAN10 at chr16:3139092-3142773 - (NM_001192113) zinc finger and SCAN domain-containing protein 10
Zscan10 at chr16:3139089-3149313 - (NM_001289483) zinc finger and SCAN domain-containing protein 10 isoform 4
Zscan10 at chr16:3139089-3149313 - (NM_001289482) zinc finger and SCAN domain-containing protein 10 isoform 3
Zscan10 at chr16:3139089-3149313 - (NM_001289484) zinc finger and SCAN domain-containing protein 10 isoform 5
Zscan10 at chr16:3139089-3149313 - (NM_001289481) zinc finger and SCAN domain-containing protein 10 isoform 2
Zscan10 at chr16:3139089-3149313 - (NM_001033425) zinc finger and SCAN domain-containing protein 10 isoform 1

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

ZSCAN10 at chr16:3138891-3149295
ZSCAN10 at chr16:3138895-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140553-3149262

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

ZSCAN10 at chr16:3138891-3149295
ZSCAN10 at chr16:3138895-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140233-3143237
ZSCAN10 at chr16:3140235-3149229
ZSCAN10 at chr16:3140553-3149262
ZSCAN10 at chr16:3142230-3149295
ZSCAN10 at chr16:3142452-3149271
ZSCAN10 at chr16:3146451-3149293

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

ZSCAN10 at chr16:3138891-3149318
ZSCAN10 at chr16:3138895-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140553-3149262

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

ZSCAN10 at chr16:3138891-3149318
ZSCAN10 at chr16:3138895-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140233-3143237
ZSCAN10 at chr16:3140235-3149229
ZSCAN10 at chr16:3140553-3149262
ZSCAN10 at chr16:3142230-3149295
ZSCAN10 at chr16:3142452-3149271
ZSCAN10 at chr16:3146451-3149293

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

ZSCAN10 at chr16:3138891-3149318
ZSCAN10 at chr16:3138895-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140553-3149262

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

ZSCAN10 at chr16:3138891-3149318
ZSCAN10 at chr16:3138895-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140233-3143237
ZSCAN10 at chr16:3140235-3149229
ZSCAN10 at chr16:3140553-3149262
ZSCAN10 at chr16:3142230-3149295
ZSCAN10 at chr16:3142452-3149271
ZSCAN10 at chr16:3146451-3149293

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

ZSCAN10 at chr16:3138891-3149318
ZSCAN10 at chr16:3138895-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140553-3149262

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

ZSCAN10 at chr16:3138891-3149318
ZSCAN10 at chr16:3138895-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140233-3143237
ZSCAN10 at chr16:3140235-3149229
ZSCAN10 at chr16:3140553-3149262
ZSCAN10 at chr16:3142230-3149295
ZSCAN10 at chr16:3142452-3149271
ZSCAN10 at chr16:3146451-3149293

Basic Gene Annotation Set from GENCODE Version 19

ZSCAN10 at chr16:3138891-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140553-3149262
ZSCAN10 at chr16:3146451-3149293

Comprehensive Gene Annotation Set from GENCODE Version 19

ZSCAN10 at chr16:3138891-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140233-3143237
ZSCAN10 at chr16:3140233-3149318
ZSCAN10 at chr16:3140235-3149229
ZSCAN10 at chr16:3140553-3149262
ZSCAN10 at chr16:3142230-3149295
ZSCAN10 at chr16:3142452-3149271
ZSCAN10 at chr16:3146451-3149293

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

ZSCAN10 at chr16:3138891-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140553-3149262
ZSCAN10 at chr16:3146451-3149293

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

ZSCAN10 at chr16:3138891-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140233-3143237
ZSCAN10 at chr16:3140233-3149318
ZSCAN10 at chr16:3140235-3149229
ZSCAN10 at chr16:3140553-3149262
ZSCAN10 at chr16:3142230-3149295
ZSCAN10 at chr16:3142452-3149271
ZSCAN10 at chr16:3146451-3149293

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

ZSCAN10 at chr16:3138891-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140553-3149262
ZSCAN10 at chr16:3146451-3149293

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

ZSCAN10 at chr16:3138891-3142861
ZSCAN10 at chr16:3138895-3149293
ZSCAN10 at chr16:3138990-3149296
ZSCAN10 at chr16:3140233-3143237
ZSCAN10 at chr16:3140233-3149318
ZSCAN10 at chr16:3140235-3149229
ZSCAN10 at chr16:3140553-3149262
ZSCAN10 at chr16:3142230-3149295
ZSCAN10 at chr16:3142452-3149271
ZSCAN10 at chr16:3146451-3149293

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

ZSCAN10 at chr16:3138895-3142861
ZSCAN10 at chr16:3138895-3142861

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

ZSCAN10 at chr16:3138895-3142861
ZSCAN10 at chr16:3138895-3142861

International Knockout Mouse Consortium Genes Mapped to Human Genome

Zscan10_35643 at chr16:3138895-3142861
Zscan10_VG18464 at chr16:3138895-3142861

BC114452 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 2079  100.0%         16     -   3138990   3142840  BC114452     1  2079  2079

Non-Human Aligned mRNA Search Results

BC145638 - Mus musculus zinc finger and SCAN domain containing 10, mRNA (cDNA clone MGC:179222 IMAGE:9054214), complete cds.
BC166021 - Synthetic construct Mus musculus clone IMAGE:100066321, MGC:195458 zinc finger and SCAN domain containing 10 (Zscan10) mRNA, encodes complete protein.

Ensembl Genes

ZSCAN10 at chr16:3142452-3149271 - (ENST00000577059)
ZSCAN10 at chr16:3140553-3149262 - (ENST00000572548)
ZSCAN10 at chr16:3140233-3143237 - (ENST00000571903)
ZSCAN10 at chr16:3138990-3149296 - (ENST00000538082)
ZSCAN10 at chr16:3138891-3142861 - (ENST00000252463)
ZSCAN10 at chr16:3138895-3149293 - (ENST00000575108)
ZSCAN10 at chr16:3140233-3149318 - (ENST00000576985)
ZSCAN10 at chr16:3140235-3149229 - (ENST00000572431)
ZSCAN10 at chr16:3142230-3149295 - (ENST00000576483)
ZSCAN10 at chr16:3146451-3149293 - (ENST00000573931)