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Gencode Genes

ZNF660 (ENST00000322734.2) at chr3:44584964-44599694 - Homo sapiens zinc finger protein 660 (ZNF660), mRNA. (from RefSeq NM_173658)
ZNF660 (ENST00000626409.2) at chr3_KN196475v1_fix:110318-119649 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt C9J3D4)
ZNF660 (ENST00000468987.1) at chr3:44584962-44586702 - zinc finger protein 660 (from HGNC ZNF660)
ZNF660 (ENST00000441021.5) at chr3:44584964-44594295 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt C9J3D4)
ZNF660 (ENST00000416644.5) at chr3:44578223-44594311 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt C9J3N9)
ZNF660 (ENST00000631019.1) at chr3_KN196475v1_fix:110316-112056 - zinc finger protein 660 (from HGNC ZNF660)
ZNF660 (ENST00000630337.2) at chr3_KN196475v1_fix:103577-119665 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt C9J3N9)
ZNF660 (ENST00000625494.1) at chr3_KN196475v1_fix:110318-125048 - Homo sapiens zinc finger protein 660 (ZNF660), mRNA. (from RefSeq NM_173658)
ZNF197 (ENST00000627845.1) at chr3_KN196475v1_fix:154342-170616 - Homo sapiens ZNF660-ZNF197 readthrough (ZNF660-ZNF197), transcript variant 2, mRNA. (from RefSeq NM_001351733)
ZNF197 (ENST00000396058.1) at chr3:44628988-44645262 - Homo sapiens ZNF660-ZNF197 readthrough (ZNF660-ZNF197), transcript variant 2, mRNA. (from RefSeq NM_001351733)
ZNF197 (ENST00000383745.6) at chr3:44625049-44648471 - Homo sapiens ZNF660-ZNF197 readthrough (ZNF660-ZNF197), transcript variant 4, mRNA. (from RefSeq NM_001351735)
ZNF197 (ENST00000627752.2) at chr3_KN196475v1_fix:150403-173825 - Homo sapiens ZNF660-ZNF197 readthrough (ZNF660-ZNF197), transcript variant 4, mRNA. (from RefSeq NM_001351735)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_173658.3 at chr3:44584850-44599694
NM_173658.3 at chr3_KN196475v1_fix:110204-125048
NM_001351734.1 at chr3:44584850-44648471
NM_001351732.1 at chr3:44584850-44648471
NR_147691.1 at chr3:44584850-44648471
NR_147692.1 at chr3:44584850-44648471
NM_001351735.1 at chr3:44584850-44648471
NM_001351733.1 at chr3:44584850-44648471
NM_001351734.1 at chr3_KN196475v1_fix:110204-173825
NM_001351732.1 at chr3_KN196475v1_fix:110204-173825
NR_147691.1 at chr3_KN196475v1_fix:110204-173825
NR_147692.1 at chr3_KN196475v1_fix:110204-173825
NM_001351735.1 at chr3_KN196475v1_fix:110204-173825
NM_001351733.1 at chr3_KN196475v1_fix:110204-173825

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

ZNF660 at chr3:44584964-44599694

RefSeq Genes

ZNF660 at chr3_KN196475v1_fix:110318-125047 - (NM_173658) zinc finger protein 660
ZNF660 at chr3:44584964-44599693 - (NM_173658) zinc finger protein 660
ZNF660-ZNF197 at chr3:44584964-44648471 - (NR_147691) 
ZNF660-ZNF197 at chr3_KN196475v1_fix:110318-173825 - (NR_147691) 
ZNF660-ZNF197 at chr3_KN196475v1_fix:110318-173825 - (NR_147692) 
ZNF660-ZNF197 at chr3:44584964-44648471 - (NR_147692) 
ZNF660-ZNF197 at chr3:44584964-44648471 - (NM_001351733) zinc finger protein 197 isoform 1
ZNF660-ZNF197 at chr3_KN196475v1_fix:110318-173825 - (NM_001351733) zinc finger protein 197 isoform 1
ZNF660-ZNF197 at chr3_KN196475v1_fix:110318-173825 - (NM_001351735) zinc finger protein 197 isoform 2
ZNF660-ZNF197 at chr3:44584964-44648471 - (NM_001351735) zinc finger protein 197 isoform 2
ZNF660-ZNF197 at chr3:44584964-44648471 - (NM_001351734) zinc finger protein 197 isoform 2
ZNF660-ZNF197 at chr3_KN196475v1_fix:110318-173825 - (NM_001351734) zinc finger protein 197 isoform 2
ZNF660-ZNF197 at chr3:44584964-44648471 - (NM_001351732) zinc finger protein 197 isoform 1
ZNF660-ZNF197 at chr3_KN196475v1_fix:110318-173825 - (NM_001351732) zinc finger protein 197 isoform 1

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

ZNF660-ZNF197 readthrough, transcript variant 5 at chr3_KN196475v1_fix:110204-173825 - (NR_147691.1)
ZNF660-ZNF197 readthrough, transcript variant 5 at chr3:44584850-44648471 - (NR_147691.1)
ZNF660-ZNF197 readthrough, transcript variant 3 at chr3_KN196475v1_fix:110204-173825 - (NM_001351734.1)
ZNF660-ZNF197 readthrough, transcript variant 3 at chr3:44584850-44648471 - (NM_001351734.1)
ZNF660-ZNF197 readthrough, transcript variant 1 at chr3_KN196475v1_fix:110204-173825 - (NM_001351732.1)
ZNF660-ZNF197 readthrough, transcript variant 1 at chr3:44584850-44648471 - (NM_001351732.1)
ZNF660-ZNF197 readthrough, transcript variant 2 at chr3:44584850-44648471 - (NM_001351733.1)
ZNF660-ZNF197 readthrough, transcript variant 2 at chr3_KN196475v1_fix:110204-173825 - (NM_001351733.1)
ZNF660-ZNF197 readthrough, transcript variant 4 at chr3:44584850-44648471 - (NM_001351735.1)
ZNF660-ZNF197 readthrough, transcript variant 4 at chr3_KN196475v1_fix:110204-173825 - (NM_001351735.1)
ZNF660-ZNF197 readthrough, transcript variant 6 at chr3:44584850-44648471 - (NR_147692.1)
ZNF660-ZNF197 readthrough, transcript variant 6 at chr3_KN196475v1_fix:110204-173825 - (NR_147692.1)

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

ZNF660 at chr3:44584964-44599694
ZNF660 at chr3_KN196475v1_fix:110318-125048

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

ZNF660 at chr3:44578223-44594311
ZNF660 at chr3:44584962-44586702
ZNF660 at chr3:44584964-44594295
ZNF660 at chr3:44584964-44599694
ZNF660 at chr3_KN196475v1_fix:103577-119665
ZNF660 at chr3_KN196475v1_fix:110316-112056
ZNF660 at chr3_KN196475v1_fix:110318-119649
ZNF660 at chr3_KN196475v1_fix:110318-125048

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

ZNF660 at chr3:44584964-44599694
ZNF660 at chr3_KN196475v1_fix:110318-125048

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

ZNF660 at chr3:44578223-44594311
ZNF660 at chr3:44584962-44586702
ZNF660 at chr3:44584964-44594295
ZNF660 at chr3:44584964-44599694
ZNF660 at chr3_KN196475v1_fix:103577-119665
ZNF660 at chr3_KN196475v1_fix:110316-112056
ZNF660 at chr3_KN196475v1_fix:110318-119649
ZNF660 at chr3_KN196475v1_fix:110318-125048

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

ZNF660 at chr3:44584964-44599694

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

ZNF660 at chr3:44578223-44594311
ZNF660 at chr3:44584962-44586702
ZNF660 at chr3:44584964-44594295
ZNF660 at chr3:44584964-44599694

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

ZNF660 at chr3:44584964-44599694

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

ZNF660 at chr3:44578223-44594311
ZNF660 at chr3:44584962-44586702
ZNF660 at chr3:44584964-44594295
ZNF660 at chr3:44584964-44599694

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

ZNF660 at chr3:44584964-44599694

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

ZNF660 at chr3:44578223-44594311
ZNF660 at chr3:44584962-44586702
ZNF660 at chr3:44584964-44594295
ZNF660 at chr3:44584964-44599694

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

ZNF660 at chr3:44584964-44599694

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

ZNF660 at chr3:44578223-44594311
ZNF660 at chr3:44584962-44586702
ZNF660 at chr3:44584964-44594295
ZNF660 at chr3:44584964-44599694

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

ZNF660 at chr3:44584964-44599694

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

ZNF660 at chr3:44578223-44594311
ZNF660 at chr3:44584962-44586702
ZNF660 at chr3:44584964-44594295
ZNF660 at chr3:44584964-44599694

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

ZNF660 at chr3:44584964-44599694

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

ZNF660 at chr3:44578223-44594311
ZNF660 at chr3:44584962-44586702
ZNF660 at chr3:44584964-44594295
ZNF660 at chr3:44584964-44599694

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

ZNF660 at chr3:44584964-44599694

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

ZNF660 at chr3:44578223-44594311
ZNF660 at chr3:44584962-44586702
ZNF660 at chr3:44584964-44594295
ZNF660 at chr3:44584964-44599694

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

ZNF660 at chr3:44584964-44599694

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

ZNF660 at chr3:44578223-44594311
ZNF660 at chr3:44584962-44586702
ZNF660 at chr3:44584964-44594295
ZNF660 at chr3:44584964-44599694

Human Aligned mRNA Search Results

BC075094 - Homo sapiens zinc finger protein 660, mRNA (cDNA clone MGC:104146 IMAGE:30915605), complete cds.
BC075095 - Homo sapiens zinc finger protein 660, mRNA (cDNA clone MGC:103985 IMAGE:30915393), complete cds.

Human Unaligned mRNA Search Results

NR_147691 - Homo sapiens ZNF660-ZNF197 readthrough (ZNF660-ZNF197), transcript variant 5, non-coding RNA.
NR_147692 - Homo sapiens ZNF660-ZNF197 readthrough (ZNF660-ZNF197), transcript variant 6, non-coding RNA.

JU324250 Alignments in Non-Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
  838   98.0%          3     ++  44594111  44594948  JU324250     1   838   838
  838   98.0%  3_KN196475v1_fix     ++    119465    120302  JU324250     1   838   838
  292   75.7%  3_KN196475v1_fix     +-     24607     24900  JU324250   231   522   838