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UCSC Genes

WWTR1 (uc021xfm.1) at chr3:149235022-149375812 - Homo sapiens WW domain containing transcription regulator 1 (WWTR1), transcript variant 3, mRNA.
WWTR1-AS1 (uc003exi.2) at chr3:149375997-149379149 - Homo sapiens WWTR1 antisense RNA 1 (WWTR1-AS1), non-coding RNA.
WWTR1 (uc003exh.3) at chr3:149235022-149421115 - Homo sapiens WW domain containing transcription regulator 1 (WWTR1), transcript variant 2, mRNA.
WWTR1 (uc003exf.3) at chr3:149235022-149375888 - Homo sapiens WW domain containing transcription regulator 1 (WWTR1), transcript variant 1, mRNA.
WWTR1 (uc003exe.3) at chr3:149235022-149375109 - Homo sapiens WW domain containing transcription regulator 1 (WWTR1), transcript variant 3, mRNA.
TEAD3 (uc003okt.3) at chr6:35441374-35449019 - Homo sapiens TEA domain family member 3 (TEAD3), mRNA.
TEAD2 (uc031rls.1) at chr19:49843853-49865714 - Homo sapiens TEA domain family member 2 (TEAD2), transcript variant 3, mRNA.
TEAD2 (uc002pnj.4) at chr19:49843853-49865714 - Homo sapiens TEA domain family member 2 (TEAD2), transcript variant 2, mRNA.
TEAD2 (uc002pnh.4) at chr19:49843853-49864752 - Homo sapiens TEA domain family member 2 (TEAD2), transcript variant 4, mRNA.
MOB1A (uc002skh.4) at chr2:74383211-74405995 - Homo sapiens MOB kinase activator 1A (MOB1A), mRNA.
WBP2 (uc002jps.3) at chr17:73841780-73851501 - Homo sapiens WW domain binding protein 2 (WBP2), mRNA.
WBP2 (uc010wsl.2) at chr17:73841780-73851501 - Homo sapiens WW domain binding protein 2 (WBP2), mRNA.
PAX8 (uc010yxt.2) at chr2:113973574-114036498 - Homo sapiens paired box 8 (PAX8), transcript variant PAX8A, mRNA.
PAX8 (uc010fku.1) at chr2:113998655-114036498 - Homo sapiens paired box 8 (PAX8), transcript variant PAX8E, mRNA.
MOB1B (uc003hfw.3) at chr4:71768057-71853891 - Homo sapiens MOB kinase activator 1B (MOB1B), transcript variant 2, mRNA.
CCAR1 (uc001joo.3) at chr10:70480971-70551309 - Homo sapiens cell division cycle and apoptosis regulator 1 (CCAR1), mRNA.
CCAR1 (uc009xpx.1) at chr10:70480971-70531202 - Homo sapiens cell division cycle and apoptosis regulator 1 (CCAR1), mRNA.
CCAR1 (uc001jom.1) at chr10:70480971-70531202 - Homo sapiens cell division cycle and apoptosis regulator 1 (CCAR1), mRNA.
YAP1 (uc001pgt.3) at chr11:101981192-102104154 - Homo sapiens Yes-associated protein 1 (YAP1), transcript variant 1, mRNA.
YAP1 (uc010ruo.2) at chr11:101983171-102104154 - Homo sapiens Yes-associated protein 1 (YAP1), transcript variant 4, mRNA.
TEAD3 (uc003oku.4) at chr6:35441374-35464861 - Homo sapiens TEA domain family member 3 (TEAD3), mRNA.
NKX2-1 (uc001wtt.3) at chr14:36985604-36988903 - Homo sapiens NK2 homeobox 1 (NKX2-1), transcript variant 2, mRNA.
NKX2-1 (uc001wtv.3) at chr14:36985604-36989430 - Homo sapiens NK2 homeobox 1 (NKX2-1), transcript variant 1, mRNA.
TEAD4 (uc001qln.3) at chr12:3068748-3149842 - Homo sapiens TEA domain family member 4 (TEAD4), transcript variant 3, mRNA.
TEAD4 (uc010sej.2) at chr12:3068478-3149842 - Homo sapiens TEA domain family member 4 (TEAD4), transcript variant 1, mRNA.
STK3 (uc003yip.4) at chr8:99466859-99837909 - Homo sapiens serine/threonine kinase 3 (STK3), transcript variant 1, mRNA.
STK3 (uc010mbm.2) at chr8:99466859-99837909 - Homo sapiens serine/threonine kinase 3 (STK3), transcript variant 1, mRNA.
TEAD1 (uc021qdx.1) at chr11:12695969-12966284 - Homo sapiens TEA domain family member 1 (SV40 transcriptional enhancer factor) (TEAD1), mRNA.
LATS2 (uc001unr.4) at chr13:21547176-21635722 - Homo sapiens large tumor suppressor kinase 2 (LATS2), mRNA.
LATS2 (uc009zzs.3) at chr13:21547176-21634429 - Homo sapiens large tumor suppressor kinase 2 (LATS2), mRNA.
LATS1 (uc003qmu.2) at chr6:149979289-150039392 - Homo sapiens large tumor suppressor kinase 1 (LATS1), transcript variant 1, mRNA.
LATS1 (uc010kif.2) at chr6:149979289-150037561 - Homo sapiens large tumor suppressor kinase 1 (LATS1), transcript variant 3, non-coding RNA.
STK4 (uc002xnb.3) at chr20:43595120-43708593 - Homo sapiens serine/threonine kinase 4 (STK4), mRNA.
LATS1 (uc003qmv.2) at chr6:149996740-150023402 - Homo sapiens large tumor suppressor kinase 1 (LATS1), transcript variant 3, non-coding RNA.
STK4 (uc010ggw.1) at chr20:43595120-43629632 - Homo sapiens serine/threonine kinase 4 (STK4), mRNA.
SAV1 (uc001wyh.2) at chr14:51100298-51135071 - Homo sapiens salvador homolog 1 (Drosophila) (SAV1), mRNA.
MED15 (uc002zsp.3) at chr22:20861886-20941919 - Homo sapiens mediator complex subunit 15 (MED15), transcript variant 1, mRNA.
MED15 (uc010gso.3) at chr22:20861886-20941919 - Homo sapiens mediator complex subunit 15 (MED15), transcript variant 2, mRNA.
MED15 (uc002zst.3) at chr22:20927965-20941919 - Homo sapiens mediator complex subunit 15 (MED15), transcript variant 1, mRNA.
SMAD3 (uc002aqj.3) at chr15:67358195-67487533 - Homo sapiens SMAD family member 3 (SMAD3), transcript variant 1, mRNA.
SMAD3 (uc010ujt.2) at chr15:67458493-67487533 - Homo sapiens SMAD family member 3 (SMAD3), transcript variant 4, mRNA.
SMAD3 (uc010ujr.2) at chr15:67418054-67487533 - Homo sapiens SMAD family member 3 (SMAD3), transcript variant 2, mRNA.
SMAD4 (uc010xdp.2) at chr18:48556583-48611411 - Homo sapiens SMAD family member 4 (SMAD4), mRNA.
SMAD4 (uc002lfb.4) at chr18:48578696-48611411 - Homo sapiens SMAD family member 4 (SMAD4), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001168280.1 at chr3:149235022-149375812
NM_015472.4 at chr3:149235022-149375888
NM_001168278.1 at chr3:149235022-149421060
NR_040250.1 at chr3:149375997-149379151

RefSeq Genes

WWTR1 at chr3:149235022-149375812 - (NM_015472) WW domain-containing transcription regulator protein 1
WWTR1 at chr3:149235022-149375812 - (NM_001168280) WW domain-containing transcription regulator protein 1
WWTR1 at chr3:149235016-149442575 - (NM_001348362) WW domain-containing transcription regulator protein 1
WWTR1 at chr3:149235016-149421060 - (NM_001168278) WW domain-containing transcription regulator protein 1
WWTR1-AS1 at chr3:149375997-149379149 - (NR_040250) 

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

WWTR1 antisense RNA 1 at chr3:149375997-149379151 - (NR_040250.1)

Non-Human RefSeq Genes

wwtr1 at chr3:149238592-149375072 - (NM_001195769) WW domain-containing transcription regulator protein 1
Wwtr1 at chr3:149238592-149375749 - (NM_001024869) WW domain-containing transcription regulator protein 1
WWTR1 at chr3:149238034-149375093 - (NM_001193047) WW domain-containing transcription regulator protein 1
wwtr1 at chr3:149238592-149375063 - (NM_001037696) WW domain-containing transcription regulator protein 1
Wwtr1 at chr3:149235016-149375887 - (NM_133784) WW domain-containing transcription regulator protein 1 isoform 2
Wwtr1 at chr3:149235016-149375899 - (NM_001168281) WW domain-containing transcription regulator protein 1 isoform 1
wwtr1.L at chr3:149238592-149375072 - (NM_001095377) WW domain containing transcription regulator 1 L homeolog

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149238486-149258847
WWTR1 at chr3:149238509-149258053
WWTR1 at chr3:149238628-149294039
WWTR1 at chr3:149243592-149260226
WWTR1 at chr3:149290651-149375222
WWTR1 at chr3:149374678-149375554
WWTR1 at chr3:149374765-149388696
WWTR1 at chr3:149375031-149375828
WWTR1 at chr3:149419392-149454501

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149238486-149258847
WWTR1 at chr3:149238509-149258053
WWTR1 at chr3:149238628-149294039
WWTR1 at chr3:149243592-149260226
WWTR1 at chr3:149290651-149375222
WWTR1 at chr3:149374678-149375554
WWTR1 at chr3:149374765-149388696
WWTR1 at chr3:149375031-149375828
WWTR1 at chr3:149419392-149454501

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149238486-149258847
WWTR1 at chr3:149238509-149258053
WWTR1 at chr3:149238628-149294039
WWTR1 at chr3:149243592-149260226
WWTR1 at chr3:149290651-149375222
WWTR1 at chr3:149374678-149375554
WWTR1 at chr3:149374765-149388696
WWTR1 at chr3:149375031-149375828
WWTR1 at chr3:149419392-149454501

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149238486-149258847
WWTR1 at chr3:149238509-149258053
WWTR1 at chr3:149238628-149294039
WWTR1 at chr3:149243592-149260226
WWTR1 at chr3:149290651-149375222
WWTR1 at chr3:149374678-149375554
WWTR1 at chr3:149374765-149388696
WWTR1 at chr3:149375031-149375828
WWTR1 at chr3:149419392-149454501

Basic Gene Annotation Set from GENCODE Version 19

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149419392-149454501

Comprehensive Gene Annotation Set from GENCODE Version 19

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149238486-149258847
WWTR1 at chr3:149238509-149258053
WWTR1 at chr3:149238628-149294039
WWTR1 at chr3:149243592-149260226
WWTR1 at chr3:149290651-149375222
WWTR1 at chr3:149374678-149375554
WWTR1 at chr3:149374765-149388696
WWTR1 at chr3:149375031-149375828
WWTR1 at chr3:149419392-149454501

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149419392-149454501

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149238486-149258847
WWTR1 at chr3:149238509-149258053
WWTR1 at chr3:149238628-149294039
WWTR1 at chr3:149243592-149260226
WWTR1 at chr3:149290651-149375222
WWTR1 at chr3:149374678-149375554
WWTR1 at chr3:149374765-149388696
WWTR1 at chr3:149375031-149375828
WWTR1 at chr3:149419392-149454501

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149419392-149454501

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149238486-149258847
WWTR1 at chr3:149238509-149258053
WWTR1 at chr3:149238628-149294039
WWTR1 at chr3:149243592-149260226
WWTR1 at chr3:149290651-149375222
WWTR1 at chr3:149374678-149375554
WWTR1 at chr3:149374765-149388696
WWTR1 at chr3:149375031-149375828
WWTR1 at chr3:149419392-149454501

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149419392-149454501

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

WWTR1 at chr3:149235022-149421060
WWTR1 at chr3:149238032-149375888
WWTR1 at chr3:149238397-149375812
WWTR1 at chr3:149238486-149258847
WWTR1 at chr3:149238509-149258053
WWTR1 at chr3:149238628-149294039
WWTR1 at chr3:149243592-149260226
WWTR1 at chr3:149290651-149375222
WWTR1 at chr3:149374678-149375554
WWTR1 at chr3:149374765-149388696
WWTR1 at chr3:149375031-149375828
WWTR1 at chr3:149419392-149454501

International Knockout Mouse Consortium Genes Mapped to Human Genome

Wwtr1_31680 at chr3:149235022-149421060

BC014052 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 1997  100.0%          3     - 149238032 149375782  BC014052     1  1997  2015

Non-Human Aligned mRNA Search Results

DQ238862 - Danio rerio WW domain containing transcription regulator 1 (wwtr1) mRNA, complete cds.
BC162350 - Danio rerio WW domain containing transcription regulator 1, mRNA (cDNA clone MGC:193988 IMAGE:9037619), complete cds.
BC162832 - Danio rerio WW domain containing transcription regulator 1, mRNA (cDNA clone MGC:193975 IMAGE:9037137), complete cds.
BC004640 - Mus musculus WW domain containing transcription regulator 1, mRNA (cDNA clone MGC:7084 IMAGE:3157246), complete cds.
BC014727 - Mus musculus WW domain containing transcription regulator 1, mRNA (cDNA clone MGC:25480 IMAGE:4487316), complete cds.
BC097968 - Rattus norvegicus WW domain containing transcription regulator 1, mRNA (cDNA clone MGC:116096 IMAGE:7441820), complete cds.
AB551790 - Xenopus (Silurana) tropicalis Wwtr1 mRNA for WW domain containing transcription regulator 1, complete cds.
JT411255 - TSA: Ictalurus punctatus clc_471203 mRNA sequence.
JU320882 - TSA: Macaca mulatta Mamu_531613 mRNA sequence.
JU320883 - TSA: Macaca mulatta Mamu_531614 mRNA sequence.
JU320884 - TSA: Macaca mulatta Mamu_531615 mRNA sequence.
JV044346 - TSA: Macaca mulatta Mamu_416286 mRNA sequence.

Ensembl Genes

WWTR1-AS1 at chr3:149375997-149379151 - (ENST00000479752)
WWTR1-AS1 at chr3:149374839-149375593 - (ENST00000466836)
WWTR1 at chr3:149374765-149388696 - (ENST00000475579)
WWTR1-IT1 at chr3:149366784-149367971 - (ENST00000463167)
WWTR1 at chr3:149243592-149260226 - (ENST00000485244)
WWTR1 at chr3:149238509-149258053 - (ENST00000494754)
WWTR1 at chr3:149238397-149375812 - (ENST00000467467)
WWTR1 at chr3:149235022-149421060 - (ENST00000465804)
WWTR1 at chr3:149238032-149375888 - (ENST00000360632)
WWTR1 at chr3:149238486-149258847 - (ENST00000471586)
WWTR1 at chr3:149238628-149294039 - (ENST00000472417)
WWTR1 at chr3:149290651-149375222 - (ENST00000479238)
WWTR1 at chr3:149374678-149375554 - (ENST00000485352)
WWTR1-AS1 at chr3:149374807-149376098 - (ENST00000495094)
WWTR1 at chr3:149375031-149375828 - (ENST00000460517)
WWTR1 at chr3:149419392-149454501 - (ENST00000474080)

Vega Protein-Coding Annotations

OTTHUMT00000356498 at chr3:149235022-149421060
OTTHUMT00000356501 at chr3:149238032-149375888
OTTHUMT00000356500 at chr3:149238397-149375812
OTTHUMT00000356509 at chr3:149238486-149258847
OTTHUMT00000356510 at chr3:149238509-149258053
OTTHUMT00000356507 at chr3:149238628-149294039
OTTHUMT00000356508 at chr3:149243592-149260226
OTTHUMT00000356506 at chr3:149290651-149375222
OTTHUMT00000356505 at chr3:149374678-149375554
OTTHUMT00000356503 at chr3:149374765-149388696
OTTHUMT00000356504 at chr3:149375031-149375828
OTTHUMT00000356499 at chr3:149419392-149454501