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Gencode Genes

USF1 (ENST00000368021.7) at chr1:161039251-161045977 - Homo sapiens upstream transcription factor 1 (USF1), transcript variant 1, mRNA. (from RefSeq NM_007122)
USF1 (ENST00000534633.5) at chr1:161041390-161045873 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt E9PQA2)
USF1 (ENST00000531842.1) at chr1:161040209-161043342 - Contains 1 basic helix-loop-helix (bHLH) domain. (from UniProt E9PME6)
USF1 (ENST00000529476.1) at chr1:161041607-161045939 - upstream transcription factor 1 (from HGNC USF1)
USF1 (ENST00000528768.5) at chr1:161039940-161041721 - Homo sapiens upstream transcription factor 1 (USF1), transcript variant 2, mRNA. (from RefSeq NM_207005)
USF1 (ENST00000496363.5) at chr1:161040440-161045912 - upstream transcription factor 1 (from HGNC USF1)
USF1 (ENST00000491629.5) at chr1:161041326-161045908 - upstream transcription factor 1 (from HGNC USF1)
USF1 (ENST00000473969.6) at chr1:161039920-161045962 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt E9PJ52)
USF1 (ENST00000472217.1) at chr1:161039295-161040583 - upstream transcription factor 1 (from HGNC USF1)
USF1 (ENST00000368020.5) at chr1:161039251-161044941 - Homo sapiens upstream transcription factor 1 (USF1), transcript variant 3, mRNA. (from RefSeq NM_001276373)
USF1 (ENST00000368019.5) at chr1:161039855-161043359 - Contains 1 basic helix-loop-helix (bHLH) domain. (from UniProt B1AQP1)
USF2 (ENST00000595068.5) at chr19:35269065-35279814 - Transcription factor that binds to a symmetrical DNA  sequence (E-boxes) (5'-CACGTG-3') that is found in a variety of  viral and cellular promoters. (from UniProt Q15853)
USF2 (ENST00000343550.9) at chr19:35268978-35279815 - Homo sapiens upstream transcription factor 2, c-fos interacting (USF2), transcript variant 2, mRNA. (from RefSeq NM_207291)
USF2 (ENST00000222305.8) at chr19:35268962-35279821 - Homo sapiens upstream transcription factor 2, c-fos interacting (USF2), transcript variant 1, mRNA. (from RefSeq NM_003367)
GTF2I (ENST00000443166.5) at chr7:74658031-74717066 - Homo sapiens general transcription factor IIi (GTF2I), transcript variant 6, mRNA. (from RefSeq NM_001280800)
USF2 (ENST00000379134.7) at chr19:35269102-35279256 - Homo sapiens upstream transcription factor 2, c-fos interacting (USF2), transcript variant 3, mRNA. (from RefSeq NM_001321150)
KAT2B (ENST00000263754.5) at chr3:20040446-20154404 - Homo sapiens lysine acetyltransferase 2B (KAT2B), mRNA. (from RefSeq NM_003884)
USF1P1 (ENST00000451645.1) at chr21:33334571-33335096 - upstream transcription factor 1 pseudogene 1 (from HGNC USF1P1)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001276373.1 at chr1:161039251-161044937
NM_007122.4 at chr1:161039251-161045979
NM_207005.2 at chr1:161039251-161045979

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

USF1 at chr1:161039251-161045977

RefSeq Genes

USF1 at chr1:161039251-161044984 - (NM_001276373) upstream stimulatory factor 1 isoform 1
USF1 at chr1:161039251-161045977 - (NM_207005) upstream stimulatory factor 1 isoform 2
USF1 at chr1:161039251-161045977 - (NM_007122) upstream stimulatory factor 1 isoform 1

NCBI RefSeq other annotations (not NM_*, NR_*, XM_*, XR_*, NP_* or YP_*)

USF1P1 at chr21:33334613-33335100

Non-Human RefSeq Genes

USF1 at chr1:161013133-161045947 - (NM_001190245) upstream stimulatory factor 1
usf1 at chr1:161039920-161042671 - (NM_001102766) upstream transcription factor 1
usf1 at chr1:161040199-161042635 - (NM_001200349) upstream transcription factor 1
Usf1 at chr1:161039249-161043362 - (NM_031777) upstream stimulatory factor 1
USF1 at chr1:161013133-161045899 - (NM_001131808) upstream stimulatory factor 1
USF1 at chr1:161039920-161042881 - (NM_001007485) upstream stimulatory factor 1
USF1 at chr1:161039380-161043367 - (NM_001001161) upstream stimulatory factor 1
Usf1 at chr1:161039249-161045467 - (NM_009480) upstream stimulatory factor 1 isoform 1
Usf1 at chr1:161039249-161045985 - (NM_001305677) upstream stimulatory factor 1 isoform 1
Usf1 at chr1:161039249-161045985 - (NM_001305676) upstream stimulatory factor 1 isoform 1
Usf1 at chr1:161039249-161045985 - (NM_001305678) upstream stimulatory factor 1 isoform 2
USF1 at chr1:161039893-161045885 - (NM_001082635) upstream stimulatory factor 1
usf1 at chr1:161040250-161042217 - (NM_200296) upstream stimulatory factor 1
usf1 at chr19:35269658-35279217 - (NM_214653) upstream stimulatory factor
usf1.S at chr1:161039929-161042671 - (NM_001096002) upstream transcription factor 1 S homeolog

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039855-161043359

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039295-161040583
USF1 at chr1:161039855-161043359
USF1 at chr1:161039920-161045962
USF1 at chr1:161039940-161041721
USF1 at chr1:161040209-161043342
USF1 at chr1:161040440-161045912
USF1 at chr1:161041326-161045908
USF1 at chr1:161041390-161045873
USF1 at chr1:161041607-161045939

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039855-161043359

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039295-161040583
USF1 at chr1:161039855-161043359
USF1 at chr1:161039920-161045962
USF1 at chr1:161039940-161041721
USF1 at chr1:161040209-161043342
USF1 at chr1:161040440-161045912
USF1 at chr1:161041326-161045908
USF1 at chr1:161041390-161045873
USF1 at chr1:161041607-161045939

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039855-161043359

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039295-161040583
USF1 at chr1:161039855-161043359
USF1 at chr1:161039920-161045962
USF1 at chr1:161039940-161041721
USF1 at chr1:161040209-161043342
USF1 at chr1:161040440-161045912
USF1 at chr1:161041326-161045908
USF1 at chr1:161041390-161045873
USF1 at chr1:161041607-161045939

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039855-161043359

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039295-161040583
USF1 at chr1:161039855-161043359
USF1 at chr1:161039920-161045962
USF1 at chr1:161039940-161041721
USF1 at chr1:161040209-161043342
USF1 at chr1:161040440-161045912
USF1 at chr1:161041326-161045908
USF1 at chr1:161041390-161045873
USF1 at chr1:161041607-161045939

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039855-161043359

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039295-161040583
USF1 at chr1:161039855-161043359
USF1 at chr1:161039920-161045962
USF1 at chr1:161039940-161041721
USF1 at chr1:161040209-161043342
USF1 at chr1:161040440-161045912
USF1 at chr1:161041326-161045908
USF1 at chr1:161041390-161045873
USF1 at chr1:161041607-161045939

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039855-161043359

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039295-161040583
USF1 at chr1:161039855-161043359
USF1 at chr1:161039920-161045962
USF1 at chr1:161039940-161041721
USF1 at chr1:161040209-161043342
USF1 at chr1:161040440-161045912
USF1 at chr1:161041326-161045908
USF1 at chr1:161041390-161045873
USF1 at chr1:161041607-161045939

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039855-161043359

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039295-161040583
USF1 at chr1:161039855-161043359
USF1 at chr1:161039920-161045962
USF1 at chr1:161039940-161041721
USF1 at chr1:161040209-161043342
USF1 at chr1:161040440-161045912
USF1 at chr1:161041326-161045908
USF1 at chr1:161041390-161045873
USF1 at chr1:161041607-161045939

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039855-161043359

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039295-161040583
USF1 at chr1:161039855-161043359
USF1 at chr1:161039920-161045962
USF1 at chr1:161039940-161041721
USF1 at chr1:161040209-161043342
USF1 at chr1:161040440-161045912
USF1 at chr1:161041326-161045908
USF1 at chr1:161041390-161045873
USF1 at chr1:161041607-161045939

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039855-161043359

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039295-161040583
USF1 at chr1:161039855-161043359
USF1 at chr1:161039920-161045962
USF1 at chr1:161039940-161041721
USF1 at chr1:161040209-161043342
USF1 at chr1:161040440-161045912
USF1 at chr1:161041326-161045908
USF1 at chr1:161041390-161045873
USF1 at chr1:161041607-161045939

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039855-161043359

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

USF1 at chr1:161039251-161044941
USF1 at chr1:161039251-161045977
USF1 at chr1:161039295-161040583
USF1 at chr1:161039855-161043359
USF1 at chr1:161039920-161045962
USF1 at chr1:161039940-161041721
USF1 at chr1:161040209-161043342
USF1 at chr1:161040440-161045912
USF1 at chr1:161041326-161045908
USF1 at chr1:161041390-161045873
USF1 at chr1:161041607-161045939

Retroposed Genes V9, Including Pseudogenes

USF1_HUMAN at chr21:33334596-33335101 - (AB098540.1-3)
USF1 at chr21:33334596-33335101 - (AB098540.1-3)
USF1 at chr21:33334596-33335101 - (AB098540.1-3)

International Knockout Mouse Consortium Genes Mapped to Human Genome

Usf1_26329 at chr1:161039251-161045967
Usf1_49567 at chr1:161039251-161045967
Usf1_50025 at chr1:161039251-161045967
Usf1_74812 at chr1:161039251-161045967
Usf1_VG14782 at chr1:161039251-161045967

Human Aligned mRNA Search Results

AB098540 - Homo sapiens usf1-bd mRNA for upstream stimulatory factor 1 BD, complete cds.
KU178379 - Homo sapiens upstream transcription factor 1 isoform 1 (USF1) mRNA, partial cds.
KU178380 - Homo sapiens upstream transcription factor 1 isoform 2 (USF1) mRNA, complete cds.
BC035505 - Homo sapiens upstream transcription factor 1, mRNA (cDNA clone MGC:23147 IMAGE:4559819), complete cds.
AK314876 - Homo sapiens cDNA, FLJ95777, Homo sapiens upstream transcription factor 1 (USF1), mRNA.

Non-Human Aligned mRNA Search Results

BC135362 - Xenopus tropicalis upstream transcription factor 1, mRNA (cDNA clone MGC:121382 IMAGE:7606587), complete cds.
BC049784 - Mus musculus upstream transcription factor 1, mRNA (cDNA clone MGC:59374 IMAGE:6506829), complete cds.
U25286 - Lytechinus variegatus transcription factor USF1 mRNA, complete cds.
MG136231 - Synthetic construct Xenopus tropicalis clone IMAGE:7606587 upstream transcription factor 1 (usf1) gene, encodes complete protein.
KF971866 - Dicentrarchus labrax upstream stimulatory factor 1 (usf1) mRNA, partial cds.
BC088849 - Rattus norvegicus upstream transcription factor 1, mRNA (cDNA clone MGC:105389 IMAGE:7313699), complete cds.
EF208923 - Sus scrofa upstream stimulatory factor 1 isoform 2 (USF1) mRNA, complete cds, alternatively spliced.
EF219407 - Sus scrofa upstream stimulatory factor 1 isoform 1 (USF1) mRNA, complete cds.
AY241931 - Bos taurus upstream stimulatory factor 1 (USF1) mRNA, complete cds.
MF953285 - Capra hircus upstream stimulatory factor 1 (USF1) mRNA, complete cds.
BC114684 - Bos taurus upstream transcription factor 1, mRNA (cDNA clone MGC:137781 IMAGE:8087854), complete cds.
AY890587 - Synthetic construct Homo sapiens clone FLH135247.01X upstream transcription factor 1 (USF1) mRNA, complete cds.
AY893059 - Synthetic construct Homo sapiens clone FLH135243.01L upstream transcription factor 1 (USF1) mRNA, partial cds.
JU336228 - TSA: Macaca mulatta Mamu_517470 mRNA sequence.
JU477064 - TSA: Macaca mulatta Mamu_379091 mRNA sequence.
JV048156 - TSA: Macaca mulatta Mamu_423414 mRNA sequence.
GU588479 - Ictalurus punctatus clone CBPN14535 upstream stimulatory factor 1 (USF1) mRNA, complete cds.
BT057858 - Salmo salar clone ssal-evd-503-248 Upstream stimulatory factor 1 putative mRNA, complete cds.
BT074544 - Osmerus mordax clone omor-rgc-510-183 Upstream stimulatory factor 1 putative mRNA, complete cds.