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Gencode Genes

UPF3A (ENST00000375299.8) at chr13:114281601-114305817 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 21, non-coding RNA. (from RefSeq NR_148491)
UPF3A (ENST00000619079.1) at chr13:114285077-114287617 - UPF3A, regulator of nonsense mediated mRNA decay (from HGNC UPF3A)
UPF3A (ENST00000618700.4) at chr13:114281637-114283729 - UPF3A, regulator of nonsense mediated mRNA decay (from HGNC UPF3A)
UPF3A (ENST00000493727.5) at chr13:114281953-114301756 - UPF3A, regulator of nonsense mediated mRNA decay (from HGNC UPF3A)
UPF3A (ENST00000492270.1) at chr13:114281603-114282270 - UPF3A, regulator of nonsense mediated mRNA decay (from HGNC UPF3A)
UPF3A (ENST00000484246.5) at chr13:114281645-114291757 - UPF3A, regulator of nonsense mediated mRNA decay (from HGNC UPF3A)
UPF3A (ENST00000481131.5) at chr13:114285975-114291718 - UPF3A, regulator of nonsense mediated mRNA decay (from HGNC UPF3A)
UPF3A (ENST00000480362.5) at chr13:114281720-114304949 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 15, non-coding RNA. (from RefSeq NR_148485)
UPF3A (ENST00000479712.1) at chr13:114286374-114291744 - UPF3A, regulator of nonsense mediated mRNA decay (from HGNC UPF3A)
UPF3A (ENST00000475218.2) at chr13:114286385-114305808 - UPF3A, regulator of nonsense mediated mRNA decay (from HGNC UPF3A)
UPF3A (ENST00000474056.5) at chr13:114281925-114301792 - UPF3A, regulator of nonsense mediated mRNA decay (from HGNC UPF3A)
UPF3A (ENST00000351487.5) at chr13:114281628-114305808 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 19, non-coding RNA. (from RefSeq NR_148489)
IFITM2 (ENST00000399817.8) at chr11:308163-309395 - Homo sapiens interferon induced transmembrane protein 2 (IFITM2), mRNA. (from RefSeq NM_006435)
NXF1 (ENST00000532297.5) at chr11:62792171-62806302 - Involved in the nuclear export of mRNA species bearing  retroviral constitutive transport elements (CTE) and in the export  of mRNA from the nucleus to the cytoplasm. The NXF1-NXT1  heterodimer is involved in the export of HSP70 mRNA in conjunction  with ALYREF/THOC4 and THOC5. (from UniProt Q9UBU9)
SMG5 (ENST00000361813.5) at chr1:156249224-156282825 - Homo sapiens SMG5 nonsense mediated mRNA decay factor (SMG5), transcript variant 1, mRNA. (from RefSeq NM_015327)
UPF2 (ENST00000356352.6) at chr10:11920022-12035897 - Involved in nonsense-mediated decay (NMD) of mRNAs  containing premature stop codons by associating with the nuclear  exon junction complex (EJC). Recruited by UPF3B associated with  the EJC core at the cytoplasmic side of the nuclear envelope and  the subsequent formation of an UPF1-UPF2-UPF3 surveillance complex  (including UPF1 bound to release factors at the stalled ribosome)  is believed to activate NMD. In cooperation with UPF3B stimulates  both ATPase and RNA helicase activities of UPF1. Binds spliced  mRNA. (from UniProt Q9HAU5)
SMG7 (ENST00000347615.6) at chr1:183472502-183554186 - Homo sapiens SMG7 nonsense mediated mRNA decay factor (SMG7), transcript variant 1, mRNA. (from RefSeq NM_173156)
SMG7 (ENST00000515829.6) at chr1:183472527-183554190 - Homo sapiens SMG7 nonsense mediated mRNA decay factor (SMG7), transcript variant 2, mRNA. (from RefSeq NM_201568)
SMG7 (ENST00000507469.5) at chr1:183472503-183554188 - Homo sapiens SMG7 nonsense mediated mRNA decay factor (SMG7), transcript variant 4, mRNA. (from RefSeq NM_201569)
IFITM2 (ENST00000616316.1) at chr11:307927-309392 - IFN-induced antiviral protein which inhibits the entry  of viruses to the host cell cytoplasm, permitting endocytosis, but  preventing subsequent viral fusion and release of viral contents  into the cytosol. Active against multiple viruses, including  influenza A virus, SARS coronavirus (SARS-CoV), Marburg virus  (MARV), Ebola virus (EBOV), Dengue virus (DNV), West Nile virus  (WNV), human immunodeficiency virus type 1 (HIV-1) and vesicular  stomatitis virus (VSV). Can inhibit: influenza virus hemagglutinin  protein-mediated viral entry, MARV and EBOV GP1,2-mediated viral  entry, SARS-CoV S protein-mediated viral entry and VSV G protein-  mediated viral entry. Induces cell cycle arrest and mediates  apoptosis by caspase activation and in p53-independent manner. (from UniProt Q01629)
UPF2 (ENST00000397053.6) at chr10:11920023-12043170 - Homo sapiens UPF2 regulator of nonsense mediated mRNA decay (UPF2), transcript variant 1, mRNA. (from RefSeq NM_080599)
UPF2 (ENST00000357604.10) at chr10:11920022-12042809 - Homo sapiens UPF2 regulator of nonsense mediated mRNA decay (UPF2), transcript variant 2, mRNA. (from RefSeq NM_015542)
SMG7 (ENST00000508461.5) at chr1:183472500-183552263 - Homo sapiens SMG7 nonsense mediated mRNA decay factor (SMG7), transcript variant 10, mRNA. (from RefSeq NM_001350222)
NXF1 (ENST00000531709.6) at chr11:62792123-62805470 - Homo sapiens nuclear RNA export factor 1 (NXF1), transcript variant 2, mRNA. (from RefSeq NM_001081491)
NXF1 (ENST00000294172.7) at chr11:62792130-62805440 - Homo sapiens nuclear RNA export factor 1 (NXF1), transcript variant 1, mRNA. (from RefSeq NM_006362)
RNPS1 (ENST00000320225.10) at chr16:2253120-2268126 - Homo sapiens RNA binding protein with serine rich domain 1 (RNPS1), transcript variant 2, mRNA. (from RefSeq NM_080594)
RNPS1 (ENST00000566458.5) at chr16:2253117-2268397 - Homo sapiens RNA binding protein with serine rich domain 1 (RNPS1), transcript variant 4, mRNA. (from RefSeq NM_001286626)
RNPS1 (ENST00000565678.5) at chr16:2253130-2267603 - Homo sapiens RNA binding protein with serine rich domain 1 (RNPS1), transcript variant 3, mRNA. (from RefSeq NM_001286625)
RNPS1 (ENST00000397086.6) at chr16:2253116-2267848 - Homo sapiens RNA binding protein with serine rich domain 1 (RNPS1), transcript variant 1, mRNA. (from RefSeq NM_006711)
RNPS1 (ENST00000568631.5) at chr16:2253828-2267829 - Component of a splicing-dependent multiprotein exon  junction complex (EJC) deposited at splice junction on mRNAs. The  EJC is a dynamic structure consisting of a few core proteins and  several more peripheral nuclear and cytoplasmic associated factors  that join the complex only transiently either during EJC assembly  or during subsequent mRNA metabolism. Part of pre- and post-  splicing multiprotein mRNP complexes. Enhances the formation of  the ATP-dependent A complex of the spliceosome. Involved in both  constitutive splicing and, in association with SRP54 and  TRA2B/SFRS10, in distinctive modulation of alternative splicing in  a substrate-dependent manner. Participates in mRNA 3'-end  cleavage. Involved in UPF2-dependent nonsense-mediated decay (NMD)  of mRNAs containing premature stop codons. Also mediates increase  of mRNA abundance and translational efficiency. Binds spliced mRNA  20-25 nt upstream of exon-exon junctions. (from UniProt Q15287)
RNPS1 (ENST00000301730.12) at chr16:2253846-2268114 - Component of a splicing-dependent multiprotein exon  junction complex (EJC) deposited at splice junction on mRNAs. The  EJC is a dynamic structure consisting of a few core proteins and  several more peripheral nuclear and cytoplasmic associated factors  that join the complex only transiently either during EJC assembly  or during subsequent mRNA metabolism. Part of pre- and post-  splicing multiprotein mRNP complexes. Enhances the formation of  the ATP-dependent A complex of the spliceosome. Involved in both  constitutive splicing and, in association with SRP54 and  TRA2B/SFRS10, in distinctive modulation of alternative splicing in  a substrate-dependent manner. Participates in mRNA 3'-end  cleavage. Involved in UPF2-dependent nonsense-mediated decay (NMD)  of mRNAs containing premature stop codons. Also mediates increase  of mRNA abundance and translational efficiency. Binds spliced mRNA  20-25 nt upstream of exon-exon junctions. (from UniProt Q15287)
UPF1 (ENST00000262803.9) at chr19:18831938-18868236 - Homo sapiens UPF1 RNA helicase and ATPase (UPF1), transcript variant 2, mRNA. (from RefSeq NM_002911)
UPF1 (ENST00000599848.5) at chr19:18832001-18868229 - Homo sapiens UPF1 RNA helicase and ATPase (UPF1), transcript variant 1, mRNA. (from RefSeq NM_001297549)
RBM8A (ENST00000632555.1) at chr1:145921632-145927447 - Component of a splicing-dependent multiprotein exon  junction complex (EJC) deposited at splice junction on mRNAs. The  EJC is a dynamic structure consisting of a few core proteins and  several more peripheral nuclear and cytoplasmic associated factors  that join the complex only transiently either during EJC assembly  or during subsequent mRNA metabolism. Core components of the EJC,  that remains bound to spliced mRNAs throughout all stages of mRNA  metabolism, functions to mark the position of the exon-exon  junction in the mature mRNA and thereby influences downstream  processes of gene expression including mRNA splicing, nuclear mRNA  export, subcellular mRNA localization, translation efficiency and  nonsense-mediated mRNA decay (NMD). The heterodimer MAGOH-RBM8A  interacts with PYM that function to enhance the translation of  EJC-bearing spliced mRNAs by recruiting them to the ribosomal 48S  preinitiation complex. Remains associated with mRNAs in the  cytoplasm until the mRNAs engage the translation machinery. Its  removal from cytoplasmic mRNAs requires translation initiation  from EJC-bearing spliced mRNAs. Associates preferentially with  mRNAs produced by splicing. Does not interact with pre-mRNAs,  introns, or mRNAs produced from intronless cDNAs. Associates with  both nuclear mRNAs and newly exported cytoplasmic mRNAs. Complex  with MAGOH is a component of the nonsense mediated decay (NMD)  pathway. (from UniProt Q9Y5S9)
RBM8A (ENST00000369307.4) at chr1:145925642-145927460 - Component of a splicing-dependent multiprotein exon  junction complex (EJC) deposited at splice junction on mRNAs. The  EJC is a dynamic structure consisting of a few core proteins and  several more peripheral nuclear and cytoplasmic associated factors  that join the complex only transiently either during EJC assembly  or during subsequent mRNA metabolism. Core components of the EJC,  that remains bound to spliced mRNAs throughout all stages of mRNA  metabolism, functions to mark the position of the exon-exon  junction in the mature mRNA and thereby influences downstream  processes of gene expression including mRNA splicing, nuclear mRNA  export, subcellular mRNA localization, translation efficiency and  nonsense-mediated mRNA decay (NMD). The heterodimer MAGOH-RBM8A  interacts with PYM that function to enhance the translation of  EJC-bearing spliced mRNAs by recruiting them to the ribosomal 48S  preinitiation complex. Remains associated with mRNAs in the  cytoplasm until the mRNAs engage the translation machinery. Its  removal from cytoplasmic mRNAs requires translation initiation  from EJC-bearing spliced mRNAs. Associates preferentially with  mRNAs produced by splicing. Does not interact with pre-mRNAs,  introns, or mRNAs produced from intronless cDNAs. Associates with  both nuclear mRNAs and newly exported cytoplasmic mRNAs. Complex  with MAGOH is a component of the nonsense mediated decay (NMD)  pathway. (from UniProt Q9Y5S9)
RBM8A (ENST00000583313.6) at chr1:145921556-145927536 - Homo sapiens RNA binding motif protein 8A (RBM8A), mRNA. (from RefSeq NM_005105)
UPF3AP3 (ENST00000420996.2) at chr9:99998301-99999069 - UPF3A pseudogene 3 (from HGNC UPF3AP3)
UPF3AP2 (ENST00000457924.2) at chr17:20375709-20376840 - UPF3A pseudogene 2 (from HGNC UPF3AP2)
UPF3AP1 (ENST00000413731.1) at chr17:16745636-16746761 - UPF3A pseudogene 1 (from HGNC UPF3AP1)
UPF3AP2 (ENST00000578315.1) at chr17:20375369-20376393 - UPF3A pseudogene 2 (from HGNC UPF3AP2)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NR_148483.1 at chr13:114281584-114287779
NM_001353651.1 at chr13:114281584-114287779
NM_001353652.1 at chr13:114281584-114287779
NM_001353644.1 at chr13:114281584-114305817
NR_148484.1 at chr13:114281584-114305817
NR_148485.1 at chr13:114281584-114305817
NM_080687.2 at chr13:114281584-114305817
NR_148482.1 at chr13:114281584-114305817
NM_023011.3 at chr13:114281584-114305817
NR_148493.1 at chr13:114281911-114305817
NR_148490.1 at chr13:114281911-114305817
NR_148495.1 at chr13:114281911-114305817
NR_148488.1 at chr13:114281911-114305817
NR_148494.1 at chr13:114281911-114305817
NR_148496.1 at chr13:114281911-114305817
NR_148486.1 at chr13:114281911-114305817
NM_001353649.1 at chr13:114281911-114305817
NR_148489.1 at chr13:114281911-114305817
NM_001353646.1 at chr13:114281911-114305817
NR_148491.1 at chr13:114281911-114305817
NR_148492.1 at chr13:114281911-114305817
NR_148487.1 at chr13:114281911-114305817
NM_001353647.1 at chr13:114281911-114305817
NM_001353650.1 at chr13:114281911-114305817
NM_001353645.1 at chr13:114281911-114305817
NM_001353648.1 at chr13:114282392-114305817

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XR_001749647.2 at chr13:114281598-114305811
XM_011534844.1 at chr13:114281606-114305811
XM_011534848.2 at chr13:114281624-114305811
XM_011534845.2 at chr13:114281624-114305811
XM_017020709.1 at chr13:114281624-114305811
XM_024449403.1 at chr13:114281637-114291732
XM_024449402.1 at chr13:114281637-114295435
XM_011534846.1 at chr13:114281637-114296108
XR_001749649.2 at chr13:114281637-114305811
XR_001749646.2 at chr13:114281637-114305811
XR_941422.3 at chr13:114281637-114305811
XR_001749644.2 at chr13:114281637-114305811
XM_005266202.4 at chr13:114281926-114305811
XM_017020711.1 at chr13:114281926-114305811
XM_006719991.4 at chr13:114281927-114305811
XM_011534847.2 at chr13:114282392-114305811
XM_024449401.1 at chr13:114283424-114305811
XM_024449400.1 at chr13:114283424-114305811

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

UPF3A at chr13:114281601-114305817

RefSeq Genes

UPF3A at chr13:114281911-114305816 - (NM_001353645) regulator of nonsense transcripts 3A isoform c
UPF3A at chr13:114281601-114287785 - (NM_001353652) regulator of nonsense transcripts 3A isoform f
UPF3A at chr13:114281911-114305816 - (NM_001353647) regulator of nonsense transcripts 3A isoform c
UPF3A at chr13:114281601-114305816 - (NM_001353644) regulator of nonsense transcripts 3A isoform c
UPF3A at chr13:114281911-114305816 - (NM_001353650) regulator of nonsense transcripts 3A isoform d
UPF3A at chr13:114281601-114305816 - (NM_080687) regulator of nonsense transcripts 3A isoform hUpf3pdelta
UPF3A at chr13:114281601-114287785 - (NM_001353651) regulator of nonsense transcripts 3A isoform e
UPF3A at chr13:114281601-114305816 - (NM_023011) regulator of nonsense transcripts 3A isoform hUpf3p
UPF3A at chr13:114281911-114305816 - (NM_001353646) regulator of nonsense transcripts 3A isoform c
UPF3A at chr13:114282395-114305816 - (NM_001353648) regulator of nonsense transcripts 3A isoform c
UPF3A at chr13:114281911-114305816 - (NM_001353649) regulator of nonsense transcripts 3A isoform d
UPF3A at chr13:114281601-114287785 - (NR_148483) 
UPF3A at chr13:114281601-114305816 - (NR_148484) 
UPF3A at chr13:114281911-114305816 - (NR_148495) 
UPF3A at chr13:114281911-114305816 - (NR_148488) 
UPF3A at chr13:114281601-114305816 - (NR_148485) 
UPF3A at chr13:114281911-114305816 - (NR_148496) 
UPF3A at chr13:114281911-114305816 - (NR_148494) 
UPF3A at chr13:114281911-114305816 - (NR_148492) 
UPF3A at chr13:114281911-114305816 - (NR_148493) 
UPF3A at chr13:114281911-114305816 - (NR_148491) 
UPF3A at chr13:114281911-114305816 - (NR_148487) 
UPF3A at chr13:114281911-114305816 - (NR_148490) 
UPF3A at chr13:114281911-114305816 - (NR_148486) 
UPF3A at chr13:114281601-114305816 - (NR_148482) 
UPF3A at chr13:114281911-114305816 - (NR_148489) 

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 25 at chr13:114281911-114305817 - (NR_148495.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 23 at chr13:114281911-114305817 - (NR_148493.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 21 at chr13:114281911-114305817 - (NR_148491.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 19 at chr13:114281911-114305817 - (NR_148489.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 17 at chr13:114281911-114305817 - (NR_148487.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 15 at chr13:114281584-114305817 - (NR_148485.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 13 at chr13:114281584-114287779 - (NR_148483.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 2 at chr13:114281584-114305817 - (NM_080687.2)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 11 at chr13:114281584-114287779 - (NM_001353652.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 9 at chr13:114281911-114305817 - (NM_001353650.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 7 at chr13:114282392-114305817 - (NM_001353648.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 5 at chr13:114281911-114305817 - (NM_001353646.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 3 at chr13:114281584-114305817 - (NM_001353644.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 4 at chr13:114281911-114305817 - (NM_001353645.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 6 at chr13:114281911-114305817 - (NM_001353647.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 8 at chr13:114281911-114305817 - (NM_001353649.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 10 at chr13:114281584-114287779 - (NM_001353651.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 1 at chr13:114281584-114305817 - (NM_023011.3)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 12 at chr13:114281584-114305817 - (NR_148482.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 14 at chr13:114281584-114305817 - (NR_148484.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 16 at chr13:114281911-114305817 - (NR_148486.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 18 at chr13:114281911-114305817 - (NR_148488.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 20 at chr13:114281911-114305817 - (NR_148490.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 22 at chr13:114281911-114305817 - (NR_148492.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 24 at chr13:114281911-114305817 - (NR_148494.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant 26 at chr13:114281911-114305817 - (NR_148496.1)

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X17 at chr13:114281637-114305811 - (XR_001749649.2)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X14 at chr13:114281637-114305811 - (XR_001749646.2)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X18 at chr13:114281637-114291732 - (XM_024449403.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X11 at chr13:114283424-114305811 - (XM_024449401.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X10 at chr13:114281926-114305811 - (XM_017020711.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X8 at chr13:114281624-114305811 - (XM_011534848.2)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X5 at chr13:114281637-114296108 - (XM_011534846.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X1 at chr13:114281606-114305811 - (XM_011534844.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X12 at chr13:114281926-114305811 - (XM_005266202.4)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X2 at chr13:114281927-114305811 - (XM_006719991.4)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X4 at chr13:114281624-114305811 - (XM_011534845.2)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X9 at chr13:114282392-114305811 - (XM_011534847.2)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X3 at chr13:114281624-114305811 - (XM_017020709.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X7 at chr13:114283424-114305811 - (XM_024449400.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X15 at chr13:114281637-114295435 - (XM_024449402.1)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X6 at chr13:114281637-114305811 - (XR_001749644.2)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X16 at chr13:114281598-114305811 - (XR_001749647.2)
UPF3A, regulator of nonsense mediated mRNA decay, transcript variant X13 at chr13:114281637-114305811 - (XR_941422.3)

Non-Human RefSeq Genes

Upf3a at chr13:114281641-114291545 - (NM_001012159) regulator of nonsense transcripts 3A
Upf3a at chr13:114281641-114301923 - (NM_025924) regulator of nonsense transcripts 3A
UPF3A at chr13:114281637-114305804 - (NM_001285305) regulator of nonsense transcripts 3A

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

UPF3A at chr13:114281601-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

UPF3A at chr13:114281601-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808
UPF3A at chr13:114281637-114283729
UPF3A at chr13:114281645-114291757
UPF3A at chr13:114281720-114304949
UPF3A at chr13:114281925-114301792
UPF3A at chr13:114281953-114301756
UPF3A at chr13:114285077-114287617
UPF3A at chr13:114285975-114291718
UPF3A at chr13:114286374-114291744
UPF3A at chr13:114286385-114305808

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808
UPF3A at chr13:114281637-114283729
UPF3A at chr13:114281645-114291757
UPF3A at chr13:114281720-114304949
UPF3A at chr13:114281925-114301792
UPF3A at chr13:114281953-114301756
UPF3A at chr13:114285077-114287617
UPF3A at chr13:114285975-114291718
UPF3A at chr13:114286374-114291744
UPF3A at chr13:114286385-114305808

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808
UPF3A at chr13:114281637-114283729
UPF3A at chr13:114281645-114291757
UPF3A at chr13:114281720-114304949
UPF3A at chr13:114281925-114301792
UPF3A at chr13:114281953-114301756
UPF3A at chr13:114285077-114287617
UPF3A at chr13:114285975-114291718
UPF3A at chr13:114286374-114291744
UPF3A at chr13:114286385-114305808

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808
UPF3A at chr13:114281637-114283729
UPF3A at chr13:114281645-114291757
UPF3A at chr13:114281720-114304949
UPF3A at chr13:114281925-114301792
UPF3A at chr13:114281953-114301756
UPF3A at chr13:114285077-114287617
UPF3A at chr13:114285975-114291718
UPF3A at chr13:114286374-114291744
UPF3A at chr13:114286385-114305808

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808
UPF3A at chr13:114281637-114283729
UPF3A at chr13:114281645-114291757
UPF3A at chr13:114281720-114304949
UPF3A at chr13:114281925-114301792
UPF3A at chr13:114281953-114301756
UPF3A at chr13:114285077-114287617
UPF3A at chr13:114285975-114291718
UPF3A at chr13:114286374-114291744
UPF3A at chr13:114286385-114305808

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808
UPF3A at chr13:114281637-114283729
UPF3A at chr13:114281645-114291757
UPF3A at chr13:114281720-114304949
UPF3A at chr13:114281925-114301792
UPF3A at chr13:114281953-114301756
UPF3A at chr13:114285077-114287617
UPF3A at chr13:114285975-114291718
UPF3A at chr13:114286374-114291744
UPF3A at chr13:114286385-114305808

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808
UPF3A at chr13:114281637-114283729
UPF3A at chr13:114281645-114291757
UPF3A at chr13:114281720-114304949
UPF3A at chr13:114281925-114301792
UPF3A at chr13:114281953-114301756
UPF3A at chr13:114285077-114287617
UPF3A at chr13:114285975-114291718
UPF3A at chr13:114286374-114291744
UPF3A at chr13:114286385-114305808

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808
UPF3A at chr13:114281637-114283729
UPF3A at chr13:114281645-114291757
UPF3A at chr13:114281720-114304949
UPF3A at chr13:114281925-114301792
UPF3A at chr13:114281953-114301756
UPF3A at chr13:114285077-114287617
UPF3A at chr13:114285975-114291718
UPF3A at chr13:114286374-114291744
UPF3A at chr13:114286385-114305808

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808
UPF3A at chr13:114281637-114283729
UPF3A at chr13:114281645-114291757
UPF3A at chr13:114281720-114304949
UPF3A at chr13:114281925-114301792
UPF3A at chr13:114281953-114301756
UPF3A at chr13:114285077-114287617
UPF3A at chr13:114285975-114291718
UPF3A at chr13:114286374-114291744
UPF3A at chr13:114286385-114305808

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

UPF3A at chr13:114281584-114305817
UPF3A at chr13:114281603-114282270
UPF3A at chr13:114281628-114305808
UPF3A at chr13:114281637-114283729
UPF3A at chr13:114281645-114291757
UPF3A at chr13:114281720-114304949
UPF3A at chr13:114281925-114301792
UPF3A at chr13:114281953-114301756
UPF3A at chr13:114285077-114287617
UPF3A at chr13:114285975-114291718
UPF3A at chr13:114286374-114291744
UPF3A at chr13:114286385-114305808

Retroposed Genes V9, Including Pseudogenes

UPF3A at chr9:99997398-99999092 - (NM_080687.2-28)
UPF3A at chr17:16744740-16746785 - (NM_080687.2-14)
UPF3A at chr17:20374816-20376838 - (NM_080687.2-15)

International Knockout Mouse Consortium Genes Mapped to Human Genome

Upf3a_34557 at chr13:114281603-114305808
Upf3a_79784 at chr13:114281603-114305808

Human Aligned mRNA Search Results

BC008694 - Homo sapiens UPF3 regulator of nonsense transcripts homolog A (yeast), mRNA (cDNA clone IMAGE:3866772), complete cds.
BC023569 - Homo sapiens UPF3 regulator of nonsense transcripts homolog A (yeast), mRNA (cDNA clone MGC:20683 IMAGE:4127465), complete cds.

Human Unaligned mRNA Search Results

NR_148483 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 13, non-coding RNA.
NR_148484 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 14, non-coding RNA.
NR_148495 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 25, non-coding RNA.
NR_148488 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 18, non-coding RNA.
NR_148485 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 15, non-coding RNA.
NR_148496 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 26, non-coding RNA.
NR_148494 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 24, non-coding RNA.
NR_148492 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 22, non-coding RNA.
NR_148493 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 23, non-coding RNA.
NR_148491 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 21, non-coding RNA.
NR_148487 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 17, non-coding RNA.
NR_148490 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 20, non-coding RNA.
NR_148486 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 16, non-coding RNA.
NR_148482 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 12, non-coding RNA.
NR_148489 - Homo sapiens UPF3A regulator of nonsense mediated mRNA decay (UPF3A), transcript variant 19, non-coding RNA.

Non-Human Aligned mRNA Search Results

BC095761 - Danio rerio UPF3 regulator of nonsense transcripts homolog A (yeast), mRNA (cDNA clone IMAGE:7276220), partial cds.
FM986819 - Danio rerio mRNA for UPF3 regulator of nonsense transcripts homolog A (yeast) (upf3a gene).
BC088463 - Rattus norvegicus UPF3 regulator of nonsense transcripts homolog A (yeast), mRNA (cDNA clone MGC:95118 IMAGE:7127783), complete cds.
BC116988 - Mus musculus UPF3 regulator of nonsense transcripts homolog A (yeast), mRNA (cDNA clone MGC:151365 IMAGE:40126307), complete cds.
BC119035 - Mus musculus UPF3 regulator of nonsense transcripts homolog A (yeast), mRNA (cDNA clone MGC:155351 IMAGE:8733784), complete cds.
JU323887 - TSA: Macaca mulatta Mamu_522073 mRNA sequence.
JU323963 - TSA: Macaca mulatta Mamu_522072 mRNA sequence.
JU325071 - TSA: Macaca mulatta Mamu_511402 mRNA sequence.
AB179244 - Macaca fascicularis testis cDNA clone: QtsA-15960, similar to human UPF3 regulator of nonsense transcripts homolog A (yeast)(UPF3A), transcript variant 1, mRNA, RefSeq: NM_023011.2.
AB168518 - Macaca fascicularis testis cDNA clone: QtsA-12723, similar to human UPF3 regulator of nonsense transcripts homolog A (yeast)(UPF3A), transcript variant 1, mRNA, RefSeq: NM_023011.2.