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UCSC Genes

TSPO2 (uc003opj.3) at chr6:41010237-41012076 - Homo sapiens translocator protein 2 (TSPO2), transcript variant 1, mRNA.
TSPO (uc003bdo.4) at chr22:43547520-43559248 - Homo sapiens translocator protein (18kDa) (TSPO), transcript variant PBR-S, non-coding RNA.
TSPO (uc003bdn.4) at chr22:43547520-43559248 - Homo sapiens translocator protein (18kDa) (TSPO), transcript variant PBR, mRNA.
TSPO2 (uc011dub.2) at chr6:41010457-41012076 - Homo sapiens translocator protein 2 (TSPO2), transcript variant 2, mRNA.
UBE2V1 (uc031rtz.1) at chr20:48697661-48729735 - Homo sapiens ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1), transcript variant 8, mRNA.
UBE2V1 (uc031rty.1) at chr20:48697661-48729735 - Homo sapiens ubiquitin-conjugating enzyme E2 variant 1 (UBE2V1), transcript variant 11, mRNA.
STAR (uc003xkv.1) at chr8:38000218-38008600 - Homo sapiens steroidogenic acute regulatory protein (STAR), nuclear gene encoding mitochondrial protein, mRNA.
TSPOAP1 (uc002ivv.3) at chr17:56378592-56382749 - Homo sapiens mRNA; cDNA DKFZp686F02123 (from clone DKFZp686F02123).
TSPOAP1-AS1 (uc021uan.1) at chr17:56402811-56431088 - Homo sapiens BZRAP1 antisense RNA 1 (TSPOAP1-AS1), transcript variant 1, non-coding RNA.
TSPOAP1-AS1 (uc021uao.1) at chr17:56406966-56431088 - Homo sapiens BZRAP1 antisense RNA 1 (TSPOAP1-AS1), transcript variant 4, non-coding RNA.
TSPOAP1-AS1 (uc010dcv.2) at chr17:56414563-56431088 - Homo sapiens BZRAP1 antisense RNA 1 (TSPOAP1-AS1), transcript variant 9, non-coding RNA.
TSPOAP1-AS1 (uc010dcu.2) at chr17:56406299-56431088 - Homo sapiens BZRAP1 antisense RNA 1 (TSPOAP1-AS1), transcript variant 3, non-coding RNA.
TSPOAP1-AS1 (uc010dct.2) at chr17:56406299-56431088 - Homo sapiens BZRAP1 antisense RNA 1 (TSPOAP1-AS1), transcript variant 2, non-coding RNA.
TSPOAP1-AS1 (uc002iwc.3) at chr17:56414563-56431088 - Homo sapiens BZRAP1 antisense RNA 1 (TSPOAP1-AS1), transcript variant 7, non-coding RNA.
TSPOAP1-AS1 (uc002iwb.3) at chr17:56414563-56431088 - Homo sapiens BZRAP1 antisense RNA 1 (TSPOAP1-AS1), transcript variant 6, non-coding RNA.
TSPOAP1-AS1 (uc002iwa.3) at chr17:56414563-56431088 - Homo sapiens BZRAP1 antisense RNA 1 (TSPOAP1-AS1), transcript variant 5, non-coding RNA.
TSPOAP1-AS1 (uc002ivz.3) at chr17:56414563-56431088 - Homo sapiens BZRAP1 antisense RNA 1 (TSPOAP1-AS1), transcript variant 8, non-coding RNA.
TSPOAP1 (uc002ivw.4) at chr17:56378588-56383747 - Homo sapiens benzodiazapine receptor (peripheral) associated protein 1 (TSPOAP1), transcript variant 2, mRNA.
TSPOAP1 (uc010wnt.3) at chr17:56378588-56406152 - Homo sapiens benzodiazapine receptor (peripheral) associated protein 1 (TSPOAP1), transcript variant 3, mRNA.
TSPOAP1 (uc010dcs.4) at chr17:56378588-56406152 - Homo sapiens benzodiazapine receptor (peripheral) associated protein 1 (TSPOAP1), transcript variant 2, mRNA.
TSPOAP1 (uc002ivx.5) at chr17:56378588-56406152 - Homo sapiens benzodiazapine receptor (peripheral) associated protein 1 (TSPOAP1), transcript variant 1, mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_000714.6 at chr22:43547565-43559248
NR_046308.2 at chr22:43547565-43559248
NM_001256531.1 at chr22:43547939-43559248
NM_001256530.1 at chr22:43547941-43559248
NM_001010873.3 at chr6:41010206-41012076
NM_001159726.1 at chr6:41010457-41012076
NM_004758.4 at chr17:56378592-56406156
NM_001261835.2 at chr17:56378592-56406156
NM_024418.3 at chr17:56378592-56406156
NR_038410.1 at chr17:56402811-56431088
NR_038412.1 at chr17:56406299-56431088
NR_038411.1 at chr17:56406299-56431088
NR_038413.1 at chr17:56406966-56431088
NR_038418.1 at chr17:56414563-56431088
NR_038417.1 at chr17:56414563-56431088
NR_038416.1 at chr17:56414563-56431088
NR_038415.1 at chr17:56414563-56431088
NR_038414.1 at chr17:56414563-56431088

RefSeq Genes

TSPO at chr22:43547565-43559248 - (NM_000714) translocator protein
TSPO at chr22:43547939-43559248 - (NM_001256531) translocator protein
TSPO at chr22:43547941-43559248 - (NM_001256530) translocator protein
TSPO at chr22:43547565-43559248 - (NR_046308) 
TSPO2 at chr6:41010457-41012076 - (NM_001159726) translocator protein 2
TSPO2 at chr6:41010206-41012076 - (NM_001010873) translocator protein 2
TSPOAP1 at chr17:56378592-56406156 - (NM_024418) peripheral-type benzodiazepine receptor-associated protein 1 isoform b
TSPOAP1 at chr17:56378592-56406156 - (NM_001261835) peripheral-type benzodiazepine receptor-associated protein 1 isoform c
TSPOAP1 at chr17:56378592-56406156 - (NM_004758) peripheral-type benzodiazepine receptor-associated protein 1 isoform a
TSPOAP1-AS1 at chr17:56414563-56431088 - (NR_038416) 
TSPOAP1-AS1 at chr17:56414563-56431088 - (NR_038417) 
TSPOAP1-AS1 at chr17:56414563-56431088 - (NR_038415) 
TSPOAP1-AS1 at chr17:56406966-56431088 - (NR_038413) 
TSPOAP1-AS1 at chr17:56402811-56431088 - (NR_038410) 
TSPOAP1-AS1 at chr17:56406299-56431088 - (NR_038412) 
TSPOAP1-AS1 at chr17:56414563-56431088 - (NR_038414) 
TSPOAP1-AS1 at chr17:56406299-56431088 - (NR_038411) 
TSPOAP1-AS1 at chr17:56414563-56431088 - (NR_038418)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1, transcript variant 8 at chr17:56414563-56431088 - (NR_038417.1)
TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1, transcript variant 6 at chr17:56414563-56431088 - (NR_038415.1)
TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1, transcript variant 4 at chr17:56406966-56431088 - (NR_038413.1)
TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1, transcript variant 2 at chr17:56406299-56431088 - (NR_038411.1)
TSPO associated protein 1, transcript variant 2 at chr17:56378592-56406156 - (NM_024418.3)
TSPO associated protein 1, transcript variant 3 at chr17:56378592-56406156 - (NM_001261835.2)
TSPO associated protein 1, transcript variant 1 at chr17:56378592-56406156 - (NM_004758.4)
TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1, transcript variant 1 at chr17:56402811-56431088 - (NR_038410.1)
TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1, transcript variant 3 at chr17:56406299-56431088 - (NR_038412.1)
TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1, transcript variant 5 at chr17:56414563-56431088 - (NR_038414.1)
TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1, transcript variant 7 at chr17:56414563-56431088 - (NR_038416.1)
TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1, transcript variant 9 at chr17:56414563-56431088 - (NR_038418.1)

Non-Human RefSeq Genes

TSPO at chr22:43547551-43559226 - (NM_001258111) translocator protein
Tspo at chr22:43555222-43559243 - (NM_012515) translocator protein
TSPO at chr22:43547577-43558998 - (NM_213753) translocator protein
TSPO at chr22:43555215-43559237 - (NM_175776) translocator protein
Tspo at chr22:43555222-43559002 - (NM_009775) translocator protein
TSPO at chr22:43555245-43558997 - (NM_001009747) translocator protein
TSPO2 at chr6:41010457-41012076 - (NM_001194867) translocator protein 2
Tspo2 at chr6:41011297-41011868 - (NM_027292) translocator protein 2
Tspoap1 at chr17:56378590-56406154 - (NM_172449) peripheral-type benzodiazepine receptor-associated protein 1

Basic Gene Annotation Set from GENCODE Version 45lift37 (Ensembl 111)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Comprehensive Gene Annotation Set from GENCODE Version 45lift37 (Ensembl 111)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547579-43555678
TSPO at chr22:43547905-43557196
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Basic Gene Annotation Set from GENCODE Version 44lift37 (Ensembl 110)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Comprehensive Gene Annotation Set from GENCODE Version 44lift37 (Ensembl 110)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547579-43555678
TSPO at chr22:43547905-43557196
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Basic Gene Annotation Set from GENCODE Version 43lift37 (Ensembl 109)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Comprehensive Gene Annotation Set from GENCODE Version 43lift37 (Ensembl 109)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547579-43555678
TSPO at chr22:43547905-43557196
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Basic Gene Annotation Set from GENCODE Version 42lift37 (Ensembl 108)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Comprehensive Gene Annotation Set from GENCODE Version 42lift37 (Ensembl 108)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547579-43555678
TSPO at chr22:43547905-43557196
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Basic Gene Annotation Set from GENCODE Version 41lift37 (Ensembl 107)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Comprehensive Gene Annotation Set from GENCODE Version 41lift37 (Ensembl 107)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547579-43555678
TSPO at chr22:43547905-43557196
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Basic Gene Annotation Set from GENCODE Version 40lift37 (Ensembl 106)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Comprehensive Gene Annotation Set from GENCODE Version 40lift37 (Ensembl 106)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547579-43555678
TSPO at chr22:43547905-43557196
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Basic Gene Annotation Set from GENCODE Version 39lift37 (Ensembl 105)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Comprehensive Gene Annotation Set from GENCODE Version 39lift37 (Ensembl 105)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547579-43555678
TSPO at chr22:43547905-43557196
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Basic Gene Annotation Set from GENCODE Version 38lift37 (Ensembl 104)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Comprehensive Gene Annotation Set from GENCODE Version 38lift37 (Ensembl 104)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547579-43555678
TSPO at chr22:43547905-43557196
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Basic Gene Annotation Set from GENCODE Version 37lift37 (Ensembl 103)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Comprehensive Gene Annotation Set from GENCODE Version 37lift37 (Ensembl 103)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547579-43555678
TSPO at chr22:43547905-43557196
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Basic Gene Annotation Set from GENCODE Version 36lift37 (Ensembl 102)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Comprehensive Gene Annotation Set from GENCODE Version 36lift37 (Ensembl 102)

TSPO at chr22:43547553-43559247
TSPO at chr22:43547565-43559248
TSPO at chr22:43547579-43555678
TSPO at chr22:43547905-43557196
TSPO at chr22:43547937-43559216
TSPO at chr22:43547941-43559247

Retroposed Genes V5, Including Pseudogenes

TSPOAP1 at chr22:21900371-21904132 - (NM_001261835.1-5)
TSPOAP1 at chr22:20456407-20460168 - (NM_001261835.1-3)
TSPOAP1 at chr22:21739281-21743042 - (NM_001261835.1-4)

International Knockout Mouse Consortium Genes Mapped to Human Genome

Tspo2_72150 at chr6:41010237-41012076
Tspo2_78813 at chr6:41010237-41012076
Tspo2_78894 at chr6:41010237-41012076
Tspo2_VG10216 at chr6:41010237-41012076
Tspo_39666 at chr22:43547535-43559248
Tspo_79098 at chr22:43547535-43559248

BC001110 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
  831   99.7%         22     +  43547570  43559248  BC001110     1   831   871

Human Unaligned mRNA Search Results

NR_038416 - Homo sapiens TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 (TSPOAP1-AS1), transcript variant 7, long non-coding RNA.
NR_038417 - Homo sapiens TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 (TSPOAP1-AS1), transcript variant 8, long non-coding RNA.
NR_038415 - Homo sapiens TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 (TSPOAP1-AS1), transcript variant 6, long non-coding RNA.
NR_038413 - Homo sapiens TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 (TSPOAP1-AS1), transcript variant 4, long non-coding RNA.
NR_038410 - Homo sapiens TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 (TSPOAP1-AS1), transcript variant 1, long non-coding RNA.
NR_038412 - Homo sapiens TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 (TSPOAP1-AS1), transcript variant 3, long non-coding RNA.
NR_038414 - Homo sapiens TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 (TSPOAP1-AS1), transcript variant 5, long non-coding RNA.
NR_038411 - Homo sapiens TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 (TSPOAP1-AS1), transcript variant 2, long non-coding RNA.
NR_038418 - Homo sapiens TSPOAP1, SUPT4H1 and RNF43 antisense RNA 1 (TSPOAP1-AS1), transcript variant 9, long non-coding RNA.
NR_046308 - Homo sapiens translocator protein (TSPO), transcript variant PBR-S, non-coding RNA.

Non-Human Aligned mRNA Search Results

BC102933 - Bos taurus translocator protein (18kDa), mRNA (cDNA clone MGC:128236 IMAGE:7988662), complete cds.
MN397823 - Canis lupus familiaris isolate wildtype translocator protein 2 (TSPO2) mRNA, complete cds.
MN397824 - Canis lupus familiaris isolate C40Y translocator protein 2 (TSPO2) mRNA, complete cds.
MN397825 - Canis lupus familiaris isolate VFT translocator protein 2 (TSPO2) mRNA, complete cds.
BC002055 - Mus musculus translocator protein, mRNA (cDNA clone MGC:6086 IMAGE:3493196), complete cds.
KF896560 - Panthera tigris altaica clone PTA13163 translocator protein (TSPO) mRNA, complete cds.
JU325941 - TSA: Macaca mulatta Mamu_537083 mRNA sequence.
JU476994 - TSA: Macaca mulatta Mamu_385205 mRNA sequence.
JV044420 - TSA: Macaca mulatta Mamu_416761 mRNA sequence.
BT082593 - Anoplopoma fimbria clone afim-evh-506-367 Translocator protein putative mRNA, complete cds.

Ensembl Genes

TSPO2 at chr6:41010310-41011995 - (ENST00000373158)
TSPO at chr22:43547937-43559216 - (ENST00000329563)
TSPO at chr22:43547579-43555678 - (ENST00000472378)
TSPO at chr22:43547535-43559247 - (ENST00000396265)
TSPO at chr22:43547520-43559248 - (ENST00000337554)
TSPO at chr22:43547553-43559247 - (ENST00000583777)
TSPO at chr22:43547905-43557196 - (ENST00000428336)
TSPO2 at chr6:41010293-41012076 - (ENST00000373161)
TSPO2 at chr6:41010457-41011951 - (ENST00000470917)

Vega Protein-Coding Annotations

OTTHUMT00000318951 at chr22:43547520-43559248
OTTHUMT00000318952 at chr22:43547553-43559247
OTTHUMT00000319617 at chr22:43547579-43555678
OTTHUMT00000319619 at chr22:43547905-43557196
OTTHUMT00000319618 at chr22:43547937-43559216
OTTHUMT00000040493 at chr6:41010293-41012076
OTTHUMT00000353409 at chr6:41010310-41011995
OTTHUMT00000353408 at chr6:41010457-41011951

HUGO Gene Nomenclature

TSPO at chr22:43547566-43559248
TSPO2 at chr6:41010207-41012076
TSPOAP1 at chr17:56378593-56406156
TSPOAP1-AS1 at chr17:56402812-56431088

gnomAD Loss of Function Metrics by Gene

TSPO at chr22:43547937-43559216

gnomAD Loss of Function Metrics by Transcript

ENST00000329563 at chr22:43547937-43559216
ENST00000337554 at chr22:43547520-43559248
ENST00000396265 at chr22:43547535-43559247
ENST00000428336 at chr22:43547905-43557196
ENST00000583777 at chr22:43547553-43559247