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Gencode Genes

TRPC6 (ENST00000344327.8) at chr11:101451564-101584007 - Homo sapiens transient receptor potential cation channel subfamily C member 6 (TRPC6), mRNA. (from RefSeq NM_004621)
TRPC6 (ENST00000532184.1) at chr11:101453641-101455577 - transient receptor potential cation channel subfamily C member 6 (from HGNC TRPC6)
TRPC6 (ENST00000532133.5) at chr11:101452872-101583506 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt E9PJN4)
TRPC6 (ENST00000527240.1) at chr11:101491381-101504090 - transient receptor potential cation channel subfamily C member 6 (from HGNC TRPC6)
TRPC6 (ENST00000526713.1) at chr11:101504705-101872562 - transient receptor potential cation channel subfamily C member 6 (from HGNC TRPC6)
TRPC6 (ENST00000360497.4) at chr11:101452955-101583503 - Thought to form a receptor-activated non-selective  calcium permeant cation channel. Probably is operated by a  phosphatidylinositol second messenger system activated by receptor  tyrosine kinases or G-protein coupled receptors. Activated by  diacylglycerol (DAG) in a membrane-delimited fashion,  independently of protein kinase C. Seems not to be activated by  intracellular calcium store depletion. (from UniProt Q9Y210)
TRPC6 (ENST00000348423.8) at chr11:101452955-101583503 - Thought to form a receptor-activated non-selective  calcium permeant cation channel. Probably is operated by a  phosphatidylinositol second messenger system activated by receptor  tyrosine kinases or G-protein coupled receptors. Activated by  diacylglycerol (DAG) in a membrane-delimited fashion,  independently of protein kinase C. Seems not to be activated by  intracellular calcium store depletion. (from UniProt Q9Y210)
RNF24 (ENST00000432261.6) at chr20:3931424-3974387 - May play a role in TRPCs intracellular trafficking. (from UniProt Q9Y225)
RNF24 (ENST00000545616.2) at chr20:3933567-4015545 - Homo sapiens ring finger protein 24 (RNF24), transcript variant 3, mRNA. (from RefSeq NM_001134338)
RNF24 (ENST00000336095.10) at chr20:3927309-4015389 - Homo sapiens ring finger protein 24 (RNF24), transcript variant 1, mRNA. (from RefSeq NM_007219)
RNF24 (ENST00000358395.11) at chr20:3927311-4015558 - Homo sapiens ring finger protein 24 (RNF24), transcript variant 4, mRNA. (from RefSeq NM_001321749)
FYN (ENST00000538466.5) at chr6:111660332-111720062 - Non-receptor tyrosine-protein kinase that plays a role  in many biological processes including regulation of cell growth  and survival, cell adhesion, integrin-mediated signaling,  cytoskeletal remodeling, cell motility, immune response and axon  guidance. Inactive FYN is phosphorylated on its C-terminal tail  within the catalytic domain. Following activation by PKA, the  protein subsequently associates with PTK2/FAK1, allowing PTK2/FAK1  phosphorylation, activation and targeting to focal adhesions.  Involved in the regulation of cell adhesion and motility through  phosphorylation of CTNNB1 (beta-catenin) and CTNND1 (delta-  catenin). Regulates cytoskeletal remodeling by phosphorylating  several proteins including the actin regulator WAS and the  microtubule-associated proteins MAP2 and MAPT. Promotes cell  survival by phosphorylating AGAP2/PIKE-A and preventing its  apoptotic cleavage. Participates in signal transduction pathways  that regulate the integrity of the glomerular slit diaphragm (an  essential part of the glomerular filter of the kidney) by  phosphorylating several slit diaphragm components including NPHS1,  KIRREL and TRPC6. Plays a role in neural processes by  phosphorylating DPYSL2, a multifunctional adapter protein within  the central nervous system, ARHGAP32, a regulator for Rho family  GTPases implicated in various neural functions, and SNCA, a small  pre-synaptic protein. Participates in the downstream signaling  pathways that lead to T-cell differentiation and proliferation  following T-cell receptor (TCR) stimulation. Also participates in  negative feedback regulation of TCR signaling through  phosphorylation of PAG1, thereby promoting interaction between  PAG1 and CSK and recruitment of CSK to lipid rafts. CSK maintains  LCK and FYN in an inactive form. Promotes CD28-induced  phosphorylation of VAV1. (from UniProt P06241)
FYN (ENST00000368678.8) at chr6:111661286-111873430 - Non-receptor tyrosine-protein kinase that plays a role  in many biological processes including regulation of cell growth  and survival, cell adhesion, integrin-mediated signaling,  cytoskeletal remodeling, cell motility, immune response and axon  guidance. Inactive FYN is phosphorylated on its C-terminal tail  within the catalytic domain. Following activation by PKA, the  protein subsequently associates with PTK2/FAK1, allowing PTK2/FAK1  phosphorylation, activation and targeting to focal adhesions.  Involved in the regulation of cell adhesion and motility through  phosphorylation of CTNNB1 (beta-catenin) and CTNND1 (delta-  catenin). Regulates cytoskeletal remodeling by phosphorylating  several proteins including the actin regulator WAS and the  microtubule-associated proteins MAP2 and MAPT. Promotes cell  survival by phosphorylating AGAP2/PIKE-A and preventing its  apoptotic cleavage. Participates in signal transduction pathways  that regulate the integrity of the glomerular slit diaphragm (an  essential part of the glomerular filter of the kidney) by  phosphorylating several slit diaphragm components including NPHS1,  KIRREL and TRPC6. Plays a role in neural processes by  phosphorylating DPYSL2, a multifunctional adapter protein within  the central nervous system, ARHGAP32, a regulator for Rho family  GTPases implicated in various neural functions, and SNCA, a small  pre-synaptic protein. Participates in the downstream signaling  pathways that lead to T-cell differentiation and proliferation  following T-cell receptor (TCR) stimulation. Also participates in  negative feedback regulation of TCR signaling through  phosphorylation of PAG1, thereby promoting interaction between  PAG1 and CSK and recruitment of CSK to lipid rafts. CSK maintains  LCK and FYN in an inactive form. Promotes CD28-induced  phosphorylation of VAV1. (from UniProt P06241)
MX1 (ENST00000619682.1) at chr21:41432050-41459213 - Homo sapiens MX dynamin like GTPase 1 (MX1), transcript variant 4, mRNA. (from RefSeq NM_001282920)
MX1 (ENST00000398600.6) at chr21:41420515-41459214 - Homo sapiens MX dynamin like GTPase 1 (MX1), transcript variant 1, mRNA. (from RefSeq NM_001144925)
MX1 (ENST00000455164.6) at chr21:41426031-41459213 - Homo sapiens MX dynamin like GTPase 1 (MX1), transcript variant 3, mRNA. (from RefSeq NM_001178046)
MX1 (ENST00000398598.8) at chr21:41426239-41459212 - Homo sapiens MX dynamin like GTPase 1 (MX1), transcript variant 2, mRNA. (from RefSeq NM_002462)
FYN (ENST00000368682.7) at chr6:111660332-111873067 - Homo sapiens FYN proto-oncogene, Src family tyrosine kinase (FYN), transcript variant 2, mRNA. (from RefSeq NM_153047)
FYN (ENST00000354650.7) at chr6:111660332-111873452 - Homo sapiens FYN proto-oncogene, Src family tyrosine kinase (FYN), transcript variant 1, mRNA. (from RefSeq NM_002037)
FYN (ENST00000229471.8) at chr6:111661282-111759131 - Homo sapiens FYN proto-oncogene, Src family tyrosine kinase (FYN), transcript variant 3, mRNA. (from RefSeq NM_153048)
FYN (ENST00000368667.6) at chr6:111661282-111793886 - Homo sapiens FYN proto-oncogene, Src family tyrosine kinase (FYN), transcript variant 4, mRNA. (from RefSeq NM_001370529)
TRPC6P (ENST00000421233.6) at chrX:155985370-155986249 - transient receptor potential cation channel subfamily C member 6, pseudogene (from HGNC TRPC6P)
TRPC6P (ENST00000421233.6) at chrY:57171890-57172769 - transient receptor potential cation channel subfamily C member 6, pseudogene (from HGNC TRPC6P)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_004621.5 at chr11:101451564-101583928

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_011542968.3 at chr11:101451470-101510888
XM_017018221.2 at chr11:101451470-101583859
XR_001747948.2 at chr11:101451564-101583859

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

TRPC6 at chr11:101451564-101584007

RefSeq Genes

TRPC6 at chr11:101451564-101584007 - (NM_004621) short transient receptor potential channel 6

NCBI RefSeq other annotations (not NM_*, NR_*, XM_*, XR_*, NP_* or YP_*)

TRPC6P at chrY:57171874-57172771
TRPC6P at chrX:155985354-155986251

Non-Human RefSeq Genes

Trpc6 at chr11:101452893-101583476 - (NM_001173032) short transient receptor potential channel 6
Trpc6 at chr11:101452955-101583503 - (NM_053559) short transient receptor potential channel 6
Trpc6 at chr11:101452872-101583506 - (NM_001282086) short transient receptor potential channel 6 isoform 2
Trpc6 at chr11:101491530-101583506 - (NM_001282087) short transient receptor potential channel 6 isoform 3
Trpc6 at chr11:101452872-101583506 - (NM_013838) short transient receptor potential channel 6 isoform 1
TRPC6 at chr11:101451523-101583488 - (NM_001166572) short transient receptor potential channel 6
trpc6a at chr11:101452988-101504746 - (NM_001030282) short transient receptor potential channel 6

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TRPC6 at chr11:101451564-101584007
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TRPC6 at chr11:101451564-101584007
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101453641-101455577
TRPC6 at chr11:101491381-101504090
TRPC6 at chr11:101504705-101872562

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101453641-101455577
TRPC6 at chr11:101491381-101504090
TRPC6 at chr11:101504705-101872562

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101453641-101455577
TRPC6 at chr11:101491381-101504090
TRPC6 at chr11:101504705-101872562

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101453641-101455577
TRPC6 at chr11:101491381-101504090
TRPC6 at chr11:101504705-101872562

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101453641-101455577
TRPC6 at chr11:101491381-101504090
TRPC6 at chr11:101504705-101872562

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101453641-101455577
TRPC6 at chr11:101491381-101504090
TRPC6 at chr11:101504705-101872562

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101453641-101455577
TRPC6 at chr11:101491381-101504090
TRPC6 at chr11:101504705-101872562

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101453641-101455577
TRPC6 at chr11:101491381-101504090
TRPC6 at chr11:101504705-101872562

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101453641-101455577
TRPC6 at chr11:101491381-101504090
TRPC6 at chr11:101504705-101872562

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TRPC6 at chr11:101451564-101583928
TRPC6 at chr11:101452872-101583506
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101452955-101583503
TRPC6 at chr11:101453641-101455577
TRPC6 at chr11:101491381-101504090
TRPC6 at chr11:101504705-101872562

Retroposed Genes V9, Including Pseudogenes

TRPC6 at chrY:57171869-57172771 - (NM_004621.5-18)
TRPC6 at chr9_KI270823v1_alt:176603-177104 - (NM_004621.5-15)
TRPC6 at chr7:150614069-150614820 - (NM_004621.5-13)
TRPC6 at chr7:30544052-30544477 - (NM_004621.5-11)
TRPC6 at chr5:24749274-24749769 - (NM_004621.5-8)
TRPC6 at chr4:184910856-184911354 - (NM_004621.5-6)
TRPC6 at chr11:121238291-121238789 - (NM_004621.5-2)
TRPC6 at chr5:23688953-23689409 - (NM_004621.5-7)
TRPC6 at chr5:145728288-145729350 - (NM_004621.5-10)
TRPC6 at chr7:136262514-136263016 - (NM_004621.5-12)
TRPC6 at chr9:101125400-101125901 - (NM_004621.5-14)
TRPC6 at chrX:155985349-155986251 - (NM_004621.5-17)

International Knockout Mouse Consortium Genes Mapped to Human Genome

Trpc6_113725 at chr11:101451564-101583928
Trpc6_70890 at chr11:101451564-101583928
Trpc6_VG12379 at chr11:101451564-101583928

Human Aligned mRNA Search Results

BC093658 - Homo sapiens transient receptor potential cation channel, subfamily C, member 6, mRNA (cDNA clone MGC:120693 IMAGE:7939503), complete cds.
BC093660 - Homo sapiens transient receptor potential cation channel, subfamily C, member 6, mRNA (cDNA clone MGC:120695 IMAGE:7939505), complete cds.

Non-Human Aligned mRNA Search Results

BC162813 - Danio rerio transient receptor potential cation channel, subfamily C, member 6, mRNA (cDNA clone MGC:194654 IMAGE:9038022), complete cds.
BC067391 - Mus musculus transient receptor potential cation channel, subfamily C, member 6, mRNA (cDNA clone IMAGE:30459416), complete cds.
BC068310 - Mus musculus transient receptor potential cation channel, subfamily C, member 6, mRNA (cDNA clone IMAGE:30467698), complete cds.
AY434717 - Cavia porcellus TRPC6 mRNA, complete cds.
AJ293896 - Cavia porcellus partial mRNA for TRPC6 cation channel, putative alternative splice variant gpTRPC6c (trp6 gene).
AJ293895 - Cavia porcellus mRNA for TRPC6 cation channel, putative alternative splice variant gpTRPC6a (trp6 gene).
AB179746 - Bos taurus trpc6 mRNA for transient receptor potential cation channel TRPC6, partial cds.
AB180232 - Bos taurus mRNA for transient receptor potential cation channel TRPC6, partial cds.
KF446636 - Danio rerio transient receptor potential cation channel subfamily c member 6b (trpc6b) mRNA, partial cds.
KF446635 - Danio rerio transient receptor potential cation channel subfamily c member 6a (trpc6a) mRNA, complete cds.
BC141131 - Mus musculus transient receptor potential cation channel, subfamily C, member 6, mRNA (cDNA clone MGC:176092 IMAGE:9055743), complete cds.
FJ205713 - Sus scrofa transient receptor potential channel subfamily C member 6 (TRPC6) mRNA, partial cds.
AB090950 - Cavia porcellus trpc6 mRNA, complete cds.