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Gencode Genes

TRIM46 (ENST00000334634.9) at chr1:155173849-155184970 - Homo sapiens tripartite motif containing 46 (TRIM46), transcript variant 5, non-coding RNA. (from RefSeq NR_046327)
TRIM46 (ENST00000611379.1) at chr1:155174754-155184971 - Homo sapiens tripartite motif containing 46 (TRIM46), transcript variant 4, mRNA. (from RefSeq NM_001256601)
TRIM46 (ENST00000545012.5) at chr1:155173787-155184971 - Homo sapiens tripartite motif containing 46 (TRIM46), transcript variant 6, mRNA. (from RefSeq NM_001282378)
TRIM46 (ENST00000543729.5) at chr1:155173891-155179935 -   Event=Alternative splicing; Named isoforms=4;  Name=1;    IsoId=Q7Z4K8-1; Sequence=Displayed;  Name=2;    IsoId=Q7Z4K8-2; Sequence=VSP_011983, VSP_011984;    Note=No experimental confirmation available;  Name=3;    IsoId=Q7Z4K8-3; Sequence=VSP_011980, VSP_011981, VSP_011982;    Note=No experimental confirmation available;  Name=4;    IsoId=Q7Z4K8-4; Sequence=VSP_011981, VSP_011982;    Note=No experimental confirmation available; (from UniProt Q7Z4K8)
TRIM46 (ENST00000474430.5) at chr1:155173900-155182862 - tripartite motif containing 46 (from HGNC TRIM46)
TRIM46 (ENST00000468878.1) at chr1:155174754-155184951 - Homo sapiens tripartite motif containing 46 (TRIM46), transcript variant 7, non-coding RNA. (from RefSeq NR_046329)
TRIM46 (ENST00000464760.5) at chr1:155174601-155178156 - tripartite motif containing 46 (from HGNC TRIM46)
TRIM46 (ENST00000392451.6) at chr1:155173787-155184971 - tripartite motif containing 46 (from HGNC TRIM46)
TRIM46 (ENST00000368385.8) at chr1:155173878-155180621 - Homo sapiens tripartite motif containing 46 (TRIM46), transcript variant 9, non-coding RNA. (from RefSeq NR_104150)
TRIM46 (ENST00000368383.7) at chr1:155173900-155182862 - tripartite motif containing 46 (from HGNC TRIM46)
TRIM46 (ENST00000368382.5) at chr1:155173909-155184969 - Homo sapiens tripartite motif containing 46 (TRIM46), transcript variant 2, mRNA. (from RefSeq NM_001256599)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001282379.1 at chr1:155173787-155180616
NR_104150.1 at chr1:155173787-155180616
NM_001282378.1 at chr1:155173787-155184971
NM_025058.4 at chr1:155173787-155184971
NR_046327.1 at chr1:155173787-155184971
NM_001256600.1 at chr1:155173787-155184971
NM_001256599.1 at chr1:155173787-155184971
NM_001256601.1 at chr1:155174754-155184971
NR_046329.1 at chr1:155174754-155184971

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_024449915.1 at chr1:155173381-155184970
XR_002957635.1 at chr1:155173381-155184970
XM_017002393.1 at chr1:155173714-155184970
XR_001737435.1 at chr1:155173714-155184970
XM_011510002.2 at chr1:155173900-155184970
XR_001737433.2 at chr1:155173900-155184970
XM_024449914.1 at chr1:155174688-155184970

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

TRIM46 at chr1:155173849-155184970

RefSeq Genes

TRIM46 at chr1:155173849-155180633 - (NR_104150) 
TRIM46 at chr1:155174594-155184970 - (NR_046329) 
TRIM46 at chr1:155173849-155184970 - (NM_001256599) tripartite motif-containing protein 46 isoform 2
TRIM46 at chr1:155174754-155184971 - (NM_001256601) tripartite motif-containing protein 46 isoform 4
TRIM46 at chr1:155173787-155184971 - (NM_001282378) tripartite motif-containing protein 46 isoform 5
TRIM46 at chr1:155173849-155184970 - (NR_046327) 
TRIM46 at chr1:155173849-155180633 - (NM_001282379) tripartite motif-containing protein 46 isoform 6
TRIM46 at chr1:155173849-155184970 - (NM_025058) tripartite motif-containing protein 46 isoform 1

Non-Human RefSeq Genes

TRIM46 at chr1:155173888-155184845 - (NM_001266149) tripartite motif-containing protein 46
TRIM46 at chr1:155173967-155185011 - (NM_001193127) tripartite motif-containing protein 46
Trim46 at chr1:155173940-155184943 - (NM_001107691) tripartite motif-containing protein 46
Trim46 at chr1:155173883-155184954 - (NM_183037) tripartite motif-containing protein 46 isoform 2
Trim46 at chr1:155174567-155184954 - (NM_001039466) tripartite motif-containing protein 46 isoform 3
Trim46 at chr1:155175382-155184954 - (NR_121683) 
trim46b at chr1:155175548-155184136 - (NM_001083100) tripartite motif-containing 46

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173849-155184970
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155174754-155184971

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173849-155184970
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155174601-155178156
TRIM46 at chr1:155174754-155184951
TRIM46 at chr1:155174754-155184971

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174754-155184971

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174601-155178156
TRIM46 at chr1:155174754-155184951
TRIM46 at chr1:155174754-155184971

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174754-155184971

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174601-155178156
TRIM46 at chr1:155174754-155184951
TRIM46 at chr1:155174754-155184971

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174754-155184971

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174601-155178156
TRIM46 at chr1:155174754-155184951
TRIM46 at chr1:155174754-155184971

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174754-155184971

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174601-155178156
TRIM46 at chr1:155174754-155184951
TRIM46 at chr1:155174754-155184971

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174754-155184971

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174601-155178156
TRIM46 at chr1:155174754-155184951
TRIM46 at chr1:155174754-155184971

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174754-155184971

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174601-155178156
TRIM46 at chr1:155174754-155184951
TRIM46 at chr1:155174754-155184971

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174754-155184971

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174601-155178156
TRIM46 at chr1:155174754-155184951
TRIM46 at chr1:155174754-155184971

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174754-155184971

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174601-155178156
TRIM46 at chr1:155174754-155184951
TRIM46 at chr1:155174754-155184971

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174754-155184971

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173787-155184971
TRIM46 at chr1:155173878-155180621
TRIM46 at chr1:155173891-155179935
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173900-155182862
TRIM46 at chr1:155173909-155184969
TRIM46 at chr1:155173967-155184971
TRIM46 at chr1:155174601-155178156
TRIM46 at chr1:155174754-155184951
TRIM46 at chr1:155174754-155184971

International Knockout Mouse Consortium Genes Mapped to Human Genome

Trim46_29504 at chr1:155173884-155184969
Trim46_50460 at chr1:155173884-155184969
Trim46_94033 at chr1:155173884-155184969

Human Aligned mRNA Search Results

BC069416 - Homo sapiens tripartite motif-containing 46, mRNA (cDNA clone MGC:97085 IMAGE:7262300), complete cds.
BC069568 - Homo sapiens tripartite motif-containing 46, mRNA (cDNA clone MGC:97094 IMAGE:7262312), complete cds.
BC126372 - Homo sapiens tripartite motif-containing 46, mRNA (cDNA clone MGC:161650 IMAGE:8992088), complete cds.
AY251386 - Homo sapiens TRIFIC (TRIM46) mRNA, complete cds.

Human Unaligned mRNA Search Results

NR_104150 - Homo sapiens tripartite motif containing 46 (TRIM46), transcript variant 9, non-coding RNA.
NR_046329 - Homo sapiens tripartite motif containing 46 (TRIM46), transcript variant 7, non-coding RNA.
NR_046327 - Homo sapiens tripartite motif containing 46 (TRIM46), transcript variant 5, non-coding RNA.

Non-Human Aligned mRNA Search Results

BC065049 - Mus musculus tripartite motif-containing 46, mRNA (cDNA clone MGC:86021 IMAGE:6418851), complete cds.
AY251388 - Mus musculus TRIFIC (Trim46) mRNA, complete cds.
JU327142 - TSA: Macaca mulatta Mamu_527946 mRNA sequence.
JU330872 - TSA: Macaca mulatta Mamu_529573 mRNA sequence.
JU331942 - TSA: Macaca mulatta Mamu_507486 mRNA sequence.
JV667481 - TSA: Macaca mulatta Mamu_302556 mRNA sequence.
AB063011 - Macaca fascicularis brain cDNA clone:QmoA-11189, similar to human tripartite motif-containing 46 (TRIM46), mRNA, NM_025058.1.
AB063010 - Macaca fascicularis brain cDNA clone:QmoA-11185, similar to human tripartite motif-containing 46 (TRIM46), mRNA, NM_025058.1.
AB056399 - Macaca fascicularis brain cDNA, clone:QflA-10739, similar to human tripartite motif-containing 46 (TRIM46), mRNA, NM_025058.1.