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Gencode Genes

TRIM32 (ENST00000450136.1) at chr9:116687302-116701298 - Homo sapiens tripartite motif containing 32 (TRIM32), transcript variant 1, mRNA. (from RefSeq NM_012210)
TRIM32 (ENST00000411410.1) at chr9:116687343-116698260 - Contains 1 RING-type zinc finger. (from UniProt Q5JVY0)
TRIM32 (ENST00000373983.2) at chr9:116687330-116701300 - Has an E3 ubiquitin ligase activity. Ubiquitinates  DTNBP1 (dysbindin) and promotes its degradation. May play a  significant role in mediating the biological activity of the HIV-1  Tat protein in vivo. Binds specifically to the activation domain  of HIV-1 Tat and can also interact with the HIV-2 and EIAV Tat  proteins in vivo. (from UniProt Q13049)
PDE9A (ENST00000398236.7) at chr21:42653779-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 9, mRNA. (from RefSeq NM_001001574)
PDE9A (ENST00000398234.7) at chr21:42653779-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 6, mRNA. (from RefSeq NM_001001571)
PDE9A (ENST00000398232.7) at chr21:42653779-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 16, mRNA. (from RefSeq NM_001001581)
PDE9A (ENST00000398229.7) at chr21:42653779-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 12, mRNA. (from RefSeq NM_001001577)
PDE9A (ENST00000398227.7) at chr21:42653779-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 20, mRNA. (from RefSeq NM_001001585)
PDE9A (ENST00000398225.7) at chr21:42653779-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 17, mRNA. (from RefSeq NM_001001582)
PDE9A (ENST00000398224.3) at chr21:42653813-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 21, mRNA. (from RefSeq NM_001315533)
PDE9A (ENST00000380328.6) at chr21:42653779-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 5, mRNA. (from RefSeq NM_001001570)
PDE9A (ENST00000349112.7) at chr21:42653813-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 4, mRNA. (from RefSeq NM_001001569)
PDE9A (ENST00000335512.8) at chr21:42653750-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 2, mRNA. (from RefSeq NM_001001567)
PDE9A (ENST00000335440.10) at chr21:42653779-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 13, mRNA. (from RefSeq NM_001001578)
PDE9A (ENST00000328862.10) at chr21:42653779-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 18, mRNA. (from RefSeq NM_001001583)
PDE9A (ENST00000291539.11) at chr21:42653621-42775509 - Homo sapiens phosphodiesterase 9A (PDE9A), transcript variant 1, mRNA. (from RefSeq NM_002606)
UBQLN4 (ENST00000368309.4) at chr1:156035299-156053798 - Homo sapiens ubiquilin 4 (UBQLN4), transcript variant 1, mRNA. (from RefSeq NM_020131)
TRIM5 (ENST00000433961.5) at chr11:5663564-5680232 - Isoform Alpha is a retrovirus restriction factor, which  mediates species-specific, early block to retrovirus infection.  Targets retroviral capsid soon after entry into the cell, and  prevents reverse transcription of the virus RNA genome. Isoform  Alpha trimers may make multiple contacts with the hexameric  lattice of CA proteins which constitute the surface of retrovirion  core, and somehow inactivate the virus. Restricts efficiently  infection by N-MLV, but not HIV-1. May have E3 ubiquitin-protein  ligase activity. (from UniProt Q9C035)
TRIM5 (ENST00000380027.5) at chr11:5663563-5872358 - Homo sapiens tripartite motif containing 5 (TRIM5), transcript variant delta, mRNA. (from RefSeq NM_033093)
TRIM5 (ENST00000380034.8) at chr11:5663195-5685074 - Homo sapiens tripartite motif containing 5 (TRIM5), transcript variant alpha, mRNA. (from RefSeq NM_033034)
TRIM5 (ENST00000396847.7) at chr11:5663617-5685042 - Homo sapiens tripartite motif containing 5 (TRIM5), transcript variant gamma, mRNA. (from RefSeq NM_033092)
DTNBP1 (ENST00000344537.9) at chr6:15522801-15663042 - Homo sapiens dystrobrevin binding protein 1 (DTNBP1), transcript variant 1, mRNA. (from RefSeq NM_032122)
DTNBP1 (ENST00000338950.9) at chr6:15523563-15662975 - Homo sapiens dystrobrevin binding protein 1 (DTNBP1), transcript variant 2, mRNA. (from RefSeq NM_183040)
ATXN1 (ENST00000436367.5) at chr6:16299112-16761490 - Homo sapiens ataxin 1 (ATXN1), transcript variant 2, mRNA. (from RefSeq NM_001128164)
ATXN1 (ENST00000244769.8) at chr6:16299112-16761456 - Homo sapiens ataxin 1 (ATXN1), transcript variant 1, mRNA. (from RefSeq NM_000332)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001099679.1 at chr9:116687302-116701300
NM_012210.3 at chr9:116687302-116701300

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_017014486.1 at chr9:116687306-116701300
XM_005251813.4 at chr9:116687544-116701300
XM_011518398.2 at chr9:116687549-116701300

RefSeq Genes

TRIM32 at chr9:116687302-116701300 - (NM_012210) E3 ubiquitin-protein ligase TRIM32
TRIM32 at chr9:116687305-116701299 - (NM_001099679) E3 ubiquitin-protein ligase TRIM32

Non-Human RefSeq Genes

Trim32 at chr9:116697746-116700293 - (NM_053084) E3 ubiquitin-protein ligase TRIM32
Trim32 at chr9:116697746-116700293 - (NM_001161782) E3 ubiquitin-protein ligase TRIM32
Trim32 at chr9:116687360-116700186 - (NM_001012103) E3 ubiquitin-protein ligase TRIM32
TRIM32 at chr9:116687350-116700753 - (NM_001075824) E3 ubiquitin-protein ligase TRIM32
trim32 at chr9:116697785-116699695 - (NM_001113594) E3 ubiquitin-protein ligase TRIM32
TRIM32 at chr9:116697746-116699704 - (NM_001309047) E3 ubiquitin-protein ligase TRIM32
TRIM32 at chr9:116697662-116700571 - (NM_001261350) E3 ubiquitin-protein ligase TRIM32
trim32 at chr9:116697752-116699728 - (NM_001102923) E3 ubiquitin-protein ligase TRIM32

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300
TRIM32 at chr9:116687343-116698260

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300
TRIM32 at chr9:116687343-116698260

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300
TRIM32 at chr9:116687343-116698260

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300
TRIM32 at chr9:116687343-116698260

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300
TRIM32 at chr9:116687343-116698260

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300
TRIM32 at chr9:116687343-116698260

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300
TRIM32 at chr9:116687343-116698260

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300
TRIM32 at chr9:116687343-116698260

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300
TRIM32 at chr9:116687343-116698260

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TRIM32 at chr9:116687302-116701298
TRIM32 at chr9:116687330-116701300
TRIM32 at chr9:116687343-116698260

International Knockout Mouse Consortium Genes Mapped to Human Genome

Trim32_30245 at chr9:116687302-116701300
Trim32_69084 at chr9:116687302-116701300
Trim32_75653 at chr9:116687302-116701300
Trim32_77037 at chr9:116687302-116701300
Trim32_VG17695 at chr9:116687302-116701300

BC003154 Alignments in Human Aligned mRNAs

This aligns in multiple positions. Click on a hyperlink to go to tracks display at a particular alignment.
 SIZE IDENTITY CHROMOSOME STRAND  START     END       cDNA   START  END  TOTAL
------------------------------------------------------------------------------
 3138  100.0%          9     + 116687330 116700750  BC003154     1  3138  3157

Non-Human Aligned mRNA Search Results

BC154641 - Danio rerio tripartite motif-containing 32, mRNA (cDNA clone MGC:172293 IMAGE:8819640), complete cds.
JU320837 - TSA: Macaca mulatta Mamu_528624 mRNA sequence.
JU472059 - TSA: Macaca mulatta Mamu_373267 mRNA sequence.
JV046487 - TSA: Macaca mulatta Mamu_416309 mRNA sequence.
AF347694 - Mus musculus putative oncogene Trim32 mRNA, complete cds.
AF230385 - Mus musculus tripartite motif protein TRIM32 mRNA, partial cds.
BC171687 - Danio rerio tripartite motif-containing 32, mRNA (cDNA clone MGC:198414 IMAGE:9039403), complete cds.
BC171691 - Danio rerio tripartite motif-containing 32, mRNA (cDNA clone MGC:198418 IMAGE:9039407), complete cds.
BC034104 - Mus musculus tripartite motif-containing 32, mRNA (cDNA clone MGC:31538 IMAGE:4502346), complete cds.
BC081980 - Rattus norvegicus tripartite motif protein 32, mRNA (cDNA clone MGC:94163 IMAGE:7128474), complete cds.
BC091385 - Rattus norvegicus tripartite motif protein 32, mRNA (cDNA clone MGC:109467 IMAGE:7321183), complete cds.
AB734708 - Felis catus TRIM32 mRNA for tripartite motif 32, complete cds.
BC120073 - Bos taurus tripartite motif-containing 32, mRNA (cDNA clone MGC:140642 IMAGE:8272718), complete cds.
KX258198 - Epinephelus coioides tripartite motif containing 32 (TRIM32) mRNA, complete cds.
KX388359 - Cyprinus carpio tripartite motif-containing protein 32 (TRIM32) mRNA, complete cds.
AB171082 - Macaca fascicularis brain cDNA clone: QorA-12361, similar to human tripartite motif-containing 32 (TRIM32), mRNA, RefSeq: NM_012210.2.
AB168491 - Macaca fascicularis testis cDNA clone: QtsA-12532, similar to human tripartite motif-containing 32 (TRIM32), mRNA, RefSeq: NM_012210.2.

GeneReviews

TRIM32 at chr9:116687302-116701298