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UCSC Genes

TLR9 (uc003ddb.3) at chr3:52255096-52265247 - Homo sapiens toll-like receptor 9 (TLR9), mRNA.
TLR9 (uc003ddc.1) at chr3:52257936-52263798 - Homo sapiens toll-like receptor 9 (TLR9), mRNA.
TLR9 (uc003dda.2) at chr3:52255096-52260179 - Homo sapiens toll-like receptor 9 (TLR9), mRNA.
RNF216 (uc011jwj.2) at chr7:5659672-5821361 - Homo sapiens ring finger protein 216 (RNF216), transcript variant 2, mRNA.
RNF216 (uc010kta.2) at chr7:5659672-5800769 - Homo sapiens ring finger protein 216 (RNF216), transcript variant 2, mRNA.
SIGIRR (uc001lpe.1) at chr11:405716-417397 - Homo sapiens single immunoglobulin and toll-interleukin 1 receptor (TIR) domain (SIGIRR), transcript variant 3, mRNA.
SIGIRR (uc001lpf.2) at chr11:405716-417397 - Homo sapiens single immunoglobulin and toll-interleukin 1 receptor (TIR) domain (SIGIRR), transcript variant 2, mRNA.
SIGIRR (uc001lpd.2) at chr11:405716-414999 - Homo sapiens single immunoglobulin and toll-interleukin 1 receptor (TIR) domain (SIGIRR), transcript variant 1, mRNA.
CNPY3 (uc003otb.4) at chr6:42896860-42907008 - Homo sapiens canopy 3 homolog (zebrafish) (CNPY3), mRNA.
PIK3CD (uc021ogb.1) at chr1:9751525-9789172 - Homo sapiens phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta (PIK3CD), mRNA.
CNPY3 (uc003ota.4) at chr6:42896860-42907008 - Homo sapiens canopy 3 homolog (zebrafish) (CNPY3), mRNA.
UNC93B1 (uc001omw.1) at chr11:67758575-67771593 - Homo sapiens unc-93 homolog B1 (C. elegans) (UNC93B1), mRNA.
RSAD2 (uc002qyp.1) at chr2:7017796-7038363 - Homo sapiens radical S-adenosyl methionine domain containing 2 (RSAD2), mRNA.
HSP90B1 (uc010swg.2) at chr12:104324112-104341708 - Homo sapiens heat shock protein 90kDa beta (Grp94), member 1 (HSP90B1), mRNA.
RNF216 (uc003soy.2) at chr7:5659672-5821361 - Homo sapiens ring finger protein 216 (RNF216), transcript variant 2, mRNA.
RNF216 (uc010ksz.2) at chr7:5659672-5800769 - Homo sapiens ring finger protein 216 (RNF216), transcript variant 2, mRNA.
TIRAP (uc001qdn.1) at chr11:126152982-126164828 - Homo sapiens toll-interleukin 1 receptor (TIR) domain containing adaptor protein (TIRAP), transcript variant 3, mRNA.
TIRAP (uc001qdo.1) at chr11:126152982-126164828 - Homo sapiens toll-interleukin 1 receptor (TIR) domain containing adaptor protein (TIRAP), transcript variant 3, mRNA.
TIRAP (uc001qdm.1) at chr11:126152982-126164534 - Homo sapiens toll-interleukin 1 receptor (TIR) domain containing adaptor protein (TIRAP), transcript variant 3, mRNA.
PIK3CD (uc001aqb.4) at chr1:9711790-9789172 - Homo sapiens phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta (PIK3CD), mRNA.
BTK (uc004ehg.2) at chrX:100604435-100641212 - Homo sapiens Bruton agammaglobulinemia tyrosine kinase (BTK), mRNA.
HSP90B1 (uc001tkb.2) at chr12:104324112-104341708 - Homo sapiens heat shock protein 90kDa beta (Grp94), member 1 (HSP90B1), mRNA.
BTK (uc010nno.2) at chrX:100604435-100645770 - Homo sapiens Bruton agammaglobulinemia tyrosine kinase (BTK), mRNA.
BTK (uc004ehi.3) at chrX:100610583-100641212 - Homo sapiens Bruton agammaglobulinemia tyrosine kinase (BTK), mRNA.
IRF7 (uc009ycb.3) at chr11:612555-615259 - Homo sapiens interferon regulatory factor 7 (IRF7), transcript variant a, mRNA.
IRF7 (uc001lqh.3) at chr11:612555-615999 - Homo sapiens interferon regulatory factor 7 (IRF7), transcript variant a, mRNA.
IRF7 (uc010qwf.2) at chr11:612555-615647 - Homo sapiens interferon regulatory factor 7 (IRF7), transcript variant a, mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_017442.3 at chr3:52255096-52260179

RefSeq Genes

TLR9 at chr3:52255096-52260179 - (NM_017442) toll-like receptor 9 precursor

Non-Human RefSeq Genes

TLR9 at chr3:52255241-52258340 - (NM_001320282) toll-like receptor 9 precursor
TLR9 at chr3:52255241-52259637 - (NM_001285686) toll-like receptor 9 precursor
TLR9 at chr3:52255172-52259612 - (NM_001130431) toll-like receptor 9 precursor
TLR9 at chr3:52255241-52259615 - (NM_183081) toll-like receptor 9 precursor
TLR9 at chr3:52255241-52259612 - (NM_001009285) toll-like receptor 9 precursor
TLR9 at chr3:52255242-52259632 - (NM_001081790) toll-like receptor 9 precursor
Tlr9 at chr3:52255225-52258329 - (NM_198131) toll-like receptor 9 precursor
TLR9 at chr3:52255241-52259648 - (NM_001002998) toll-like receptor 9 precursor
TLR9 at chr3:52255241-52259585 - (NM_213958) toll-like receptor 9 precursor
Tlr9 at chr3:52255225-52258310 - (NM_031178) toll-like receptor 9 precursor
TLR9 at chr3:52255241-52259637 - (NM_001011555) toll-like receptor 9 precursor

Basic Gene Annotation Set from GENCODE Version 33lift37 (Ensembl 99)

TLR9 at chr3:52255096-52260179

Comprehensive Gene Annotation Set from GENCODE Version 33lift37 (Ensembl 99)

TLR9 at chr3:52255096-52260179

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

TLR9 at chr3:52255096-52260179

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

TLR9 at chr3:52255096-52260179

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

TLR9 at chr3:52255096-52260179

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

TLR9 at chr3:52255096-52260179

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

TLR9 at chr3:52255096-52260179

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

TLR9 at chr3:52255096-52260179

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

TLR9 at chr3:52255096-52260179

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

TLR9 at chr3:52255096-52260179

Basic Gene Annotation Set from GENCODE Version 19

TLR9 at chr3:52255096-52260179
TLR9 at chr3:52255097-52265206
TLR9 at chr3:52255233-52273183

Comprehensive Gene Annotation Set from GENCODE Version 19

TLR9 at chr3:52255096-52260179
TLR9 at chr3:52255097-52265206
TLR9 at chr3:52255233-52273183
TLR9 at chr3:52257936-52263789

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

TLR9 at chr3:52255096-52260179
TLR9 at chr3:52255097-52265206
TLR9 at chr3:52255233-52273183

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

TLR9 at chr3:52255096-52260179
TLR9 at chr3:52255097-52265206
TLR9 at chr3:52255233-52273183
TLR9 at chr3:52257936-52263789

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

TLR9 at chr3:52255096-52260179

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

TLR9 at chr3:52255096-52260179

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

TLR9 at chr3:52255096-52260179

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

TLR9 at chr3:52255096-52260179

International Knockout Mouse Consortium Genes Mapped to Human Genome

Tlr9_43891 at chr3:52255098-52260179
Tlr9_79018 at chr3:52255098-52260179
Tlr9_84441 at chr3:52255098-52260179

Human Aligned mRNA Search Results

AY359085 - Homo sapiens clone DNA119714 TLR9 (UNQ5798) mRNA, complete cds.
AB045180 - Homo sapiens TLR9 mRNA for toll-like receptor 9, complete cds.
AF245704 - Homo sapiens toll-like receptor 9 (TLR9) mRNA, complete cds.
AF246972 - Homo sapiens toll-like receptor 9 (TLR9) mRNA, partial cds.
AF246973 - Homo sapiens toll-like receptor 9 (TLR9) mRNA, partial cds, alternatively spliced.
AF246974 - Homo sapiens toll-like receptor 9 (TLR9) mRNA, partial cds, alternatively spliced.
AF259262 - Homo sapiens toll-like receptor 9 form A (TLR9) mRNA, complete cds; alternatively spliced.
AF259263 - Homo sapiens toll-like receptor 9 form B (TLR9) mRNA, complete cds; alternatively spliced.
AB445673 - Homo sapiens TLR9 mRNA for toll-like receptor 9, complete cds.
BC032713 - Homo sapiens toll-like receptor 9, mRNA (cDNA clone MGC:45083 IMAGE:5495717), complete cds.

Non-Human Aligned mRNA Search Results

KT354324 - Tupaia chinensis TLR9 mRNA, complete cds.
KX138608 - Bos indicus TLR9 (TLR9) mRNA, complete cds.
AB045181 - Mus musculus Tlr9 mRNA for toll-like receptor 9, complete cds.
AF314224 - Mus musculus toll-like receptor 9 (Tlr9) mRNA, complete cds.
AF348140 - Mus musculus toll-like receptor 9 (Tlr9) mRNA, complete cds.
AY197553 - Rattus norvegicus toll-like receptor 9 (Tlr9) mRNA, partial cds.
AY258139 - Rattus norvegicus toll-like receptor 9 (Tlr9) mRNA, partial cds.
BC172644 - Synthetic construct Mus musculus clone IMAGE:100069452, MGC:199354 toll-like receptor 9 (Tlr9) mRNA, encodes complete protein.
AJ509825 - Bos taurus partial mRNA for toll-like receptor 9 (tlr9 gene).
AM231305 - Ovis aries partial mRNA for Toll-like receptor 9 (tlr9 gene).
AM981307 - Ovis aries mRNA for Toll-like receptor 9 (tlr9 gene), clone 9.
AY137581 - Felis catus toll-like receptor 9 (tlr9) mRNA, complete cds.
AY137582 - Canis familiaris toll-like receptor 9 (tlr9) mRNA, partial cds.
JN202722 - Catla catla clone 2e2x toll-like receptor 9 (tlr9) mRNA, partial cds.
AY389454 - Danio rerio toll-like receptor 9 (tlr9) mRNA, partial cds.
AB061522 - Sus scrofa TLR9 mRNA for Toll like receptor 9, partial cds.
AB071394 - Sus scrofa TLR9 mRNA for Toll-like receptor 9, complete cds.
AB104899 - Canis lupus familiaris TLR9 mRNA for Toll-like receptor 9 protein, complete cds.
AB472357 - Rousettus leschenaultii TLR9 mRNA for Toll-like receptor 9, complete cds.
DQ390541 - Equus caballus toll-like receptor 9 (TLR9) mRNA, complete cds.
EU005243 - Bubalus bubalis toll-like receptor 9 (TLR9) mRNA, partial cds.
EU747825 - Capra hircus toll-like receptor 9 (TLR9) mRNA, complete cds.
EU747826 - Antilope cervicapra toll-like receptor 9 (TLR9) mRNA, partial cds.
EU747827 - Bubalus bubalis toll-like receptor 9 (TLR9) mRNA, partial cds.
EU747828 - Boselaphus tragocamelus toll-like receptor 9 (TLR9) mRNA, complete cds.
AY289533 - Sus scrofa toll-like receptor 9 (TLR9) mRNA, partial cds.
GQ227790 - Equus caballus toll-like receptor 9 (TLR9) mRNA, partial cds.
GU045608 - Pteropus alecto Toll-like receptor 9 (TLR9) mRNA, complete cds.
GU138029 - Sus scrofa Toll-like receptor 9 (TLR9) mRNA, complete cds.
GU255995 - Equus asinus toll-like receptor 9 (TLR9) mRNA, partial cds.
GU255996 - Equus asinus toll-like receptor 9 (TLR9) mRNA, partial cds.
HM113486 - Capra hircus Toll-like receptor 9 (TLR9) mRNA, complete cds.
HM448400 - Oryctolagus cuniculus toll-like receptor 9 (TLR9) mRNA, complete cds.
HQ242779 - Bubalus bubalis toll-like receptor 9 (TLR9) mRNA, complete cds.
HQ260632 - Cervus nippon toll-like receptor 9 (TLR9) mRNA, complete cds.
HQ263217 - Capra hircus Toll-like receptor 9 (TLR9) mRNA, complete cds.
HQ283275 - Bubalus bubalis clone CBT/1 toll-like receptor 9 (TLR9) mRNA, partial cds.
HQ717158 - Ovis aries Toll-like receptor 9 (TLR9) mRNA, TLR9-05 allele, partial cds.
HQ717159 - Ovis aries Toll-like receptor 9 (TLR9) mRNA, TLR9-06 allele, partial cds.
HQ717160 - Ovis aries Toll-like receptor 9 (TLR9) mRNA, TLR9-07 allele, partial cds.
JX232221 - Sus scrofa toll-like receptor 9 (TLR9) mRNA, partial cds.
JX262150 - Equus caballus clone TLR9d2 toll-like receptor 9 (TLR9) mRNA, partial cds.
JX262151 - Equus caballus clone tlr9d3 toll-like receptor 9 (TLR9) mRNA, partial cds.
JX307113 - Sus scrofa toll-like receptor 9 (TLR9) mRNA, complete cds.
KC424591 - Bubalus bubalis clone 9.1 toll-like receptor 9 (TLR9) mRNA, partial cds.
KC424592 - Bubalus bubalis clone 9.3 toll-like receptor 9 (TLR9) mRNA, partial cds.
KC424593 - Bubalus bubalis clone 9.4 toll-like receptor 9 (TLR9) mRNA, partial cds.
KC424594 - Bubalus bubalis clone 4.5 toll-like receptor 4 (TLR9) mRNA, partial cds.
KF828813 - Equus caballus toll-like receptor 9 mRNA, partial cds.
KF828814 - Equus asinus clone 2 toll-like receptor 9 (TLR9) mRNA, partial cds.
KF828815 - Equus asinus clone 4 toll-like receptor 9 (TLR9) mRNA, partial cds.
KJ438688 - Equus caballus breed Zanskari clone 3 toll-like receptor 9 (TLR9) mRNA, partial cds.
KJ438689 - Equus asinus clone 2 toll-like receptor 9 (TLR9) mRNA, partial cds.
KJ438690 - Equus asinus breed Poitu clone 3 toll-like receptor 9 (TLR9) mRNA, partial cds.
KJ460003 - Equus asinus clone 4 toll-like receptor 9 (TLR9) mRNA, partial cds.
KJ658631 - Equus caballus breed Zanskari clone 2 toll-like receptor 9 (TLR9) mRNA, partial cds.
KJ658632 - Equus caballus breed Zanskari clone 4 toll-like receptor 9 (TLR9) mRNA, partial cds.
KJ872534 - Tupaia belangeri toll-like receptor 9 (TLR9) mRNA, partial cds.
KM359141 - Bos grunniens Toll-like receptor 9 (TLR9) mRNA, complete cds.
KP792555 - Phascolarctos cinereus toll-like receptor 9 (TLR9) mRNA, complete cds.
KR052243 - Equus caballus toll-like receptor 9 (TLR9) mRNA, partial cds.
KR052244 - Equus asinus toll-like receptor 9 (TLR9) mRNA, partial cds.
KT427379 - Equus caballus breed Marwari Toll-like receptor 9 (TLR9) mRNA, partial cds.
KU577307 - Myotis ricketti toll-like receptor 9 (TLR9) mRNA, partial cds.
KU577308 - Rhinolophus affinis toll-like receptor 9 (TLR9) mRNA, complete cds.
KU577309 - Rhinolophus sinicus toll-like receptor 9 (TLR9) mRNA, complete cds.
KU577310 - Ia io toll-like receptor 9 (TLR9) mRNA, partial cds.
KU577311 - Hipposideros armiger toll-like receptor 9 (TLR9) mRNA, complete cds.
KU577312 - Miniopterus schreibersii toll-like receptor 9 (TLR9) mRNA, partial cds.
AY957620 - Ovis aries toll-like receptor 9 (TLR9) mRNA, partial cds.
AY957630 - Bos taurus toll-like receptor 9 (TLR9) mRNA, partial cds.
AY525619 - Macaca mulatta Toll-like receptor 9 (TLR9) mRNA, partial cds.
AB445674 - Pan troglodytes TLR9 mRNA for toll-like receptor 9, complete cds.
AB445675 - Pan paniscus TLR9 mRNA for toll-like receptor 9, complete cds.
AB445676 - Gorilla gorilla TLR9 mRNA for toll-like receptor 9, complete cds.
AB445677 - Pongo pygmaeus TLR9 mRNA for toll-like receptor 9, complete cds.
AB445678 - Macaca fascicularis TLR9 mRNA for toll-like receptor 9, complete cds.
AB445679 - Macaca mulatta TLR9 mRNA for toll-like receptor 9, complete cds.
KY468980 - Marmota monax toll-like receptor 9 (TLR9) mRNA, partial cds.
JU476052 - TSA: Macaca mulatta Mamu_387242 mRNA sequence.
JN599168 - Channa punctata Toll-like receptor 9 (TLR9) mRNA, partial cds.
JX073035 - Rachycentron canadum Toll-like receptor 9 (TLR9) mRNA, partial cds.
MK491844 - Botia dario Toll-like Receptor 9 (TLR9) mRNA, partial cds.
KX438369 - UNVERIFIED: Tupaia belangeri toll-like receptor TLR9-like mRNA, complete sequence.

Ensembl Genes

TLR9 at chr3:52255233-52273183 - (ENST00000597542)
TLR9 at chr3:52255096-52260179 - (ENST00000360658)
TLR9 at chr3:52255097-52265206 - (ENST00000494383)
TLR9 at chr3:52257936-52263789 - (ENST00000478201)

Vega Protein-Coding Annotations

OTTHUMT00000350203 at chr3:52255096-52260179