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UCSC Genes

TJP1 (uc001zcr.3) at chr15:29992357-30114706 - Homo sapiens tight junction protein 1 (TJP1), transcript variant 1, mRNA.
TJP1 (uc010azl.3) at chr15:29992357-30092905 - Homo sapiens tight junction protein 1 (TJP1), transcript variant 1, mRNA.
TJP1 (uc001zcs.3) at chr15:29992357-30114706 - Homo sapiens tight junction protein 1 (TJP1), transcript variant 2, mRNA.
TJP1 (uc001zcq.3) at chr15:29992357-30113751 - Homo sapiens tight junction protein 1 (TJP1), transcript variant 2, mRNA.
HSPA4 (uc003kyj.3) at chr5:132387662-132440709 - Homo sapiens heat shock 70kDa protein 4 (HSPA4), mRNA.
CGN (uc009wmw.3) at chr1:151483862-151511167 - Homo sapiens cingulin (CGN), mRNA.
CCDC85C (uc010avr.3) at chr14:99977603-100070727 - Homo sapiens coiled-coil domain containing 85C (CCDC85C), mRNA.
MPP6 (uc003swx.3) at chr7:24613085-24727498 - Homo sapiens membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) (MPP6), mRNA.
MPP6 (uc003swy.3) at chr7:24613085-24727498 - Homo sapiens membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6) (MPP6), mRNA.
PARD3B (uc010fub.2) at chr2:205410516-206166631 - Homo sapiens par-3 partitioning defective 3 homolog B (C. elegans) (PARD3B), transcript variant a, mRNA.
PARD3B (uc002var.2) at chr2:205410516-206484886 - Homo sapiens par-3 partitioning defective 3 homolog B (C. elegans) (PARD3B), transcript variant b, mRNA.
VMP1 (uc010wog.2) at chr17:57784863-57917952 - Homo sapiens vacuole membrane protein 1 (VMP1), mRNA.
VMP1 (uc002ixu.4) at chr17:57784863-57917952 - Homo sapiens vacuole membrane protein 1 (VMP1), mRNA.
UBN1 (uc002cyb.3) at chr16:4897912-4932363 - Homo sapiens ubinuclein 1 (UBN1), transcript variant 2, mRNA.
UBN1 (uc002cyc.3) at chr16:4902077-4932363 - Homo sapiens ubinuclein 1 (UBN1), transcript variant 1, mRNA.
MYZAP (uc002aei.3) at chr15:57884102-57977562 - Homo sapiens myocardial zonula adherens protein (MYZAP), transcript variant 1, mRNA.
CLDN4 (uc003tzi.4) at chr7:73245193-73247015 - Homo sapiens claudin 4 (CLDN4), mRNA.
GJA1 (uc011ebo.1) at chr6:121756745-121769230 - Homo sapiens gap junction protein, alpha 1, 43kDa (GJA1), mRNA.
CLDN2 (uc022ccc.1) at chrX:106161590-106174091 - Homo sapiens claudin 2 (CLDN2), transcript variant 3, mRNA.
CLDN2 (uc004emt.2) at chrX:106163606-106174091 - Homo sapiens claudin 2 (CLDN2), transcript variant 1, mRNA.
CLDN2 (uc004emq.1) at chrX:106143394-106174091 - Homo sapiens claudin 2 (CLDN2), transcript variant 2, mRNA.
CLDN2 (uc022ccd.1) at chrX:106171459-106172151 - Homo sapiens claudin 2 (CLDN2), transcript variant 1, mRNA.
OCLN (uc003jwu.3) at chr5:68788119-68853931 - Homo sapiens occludin (OCLN), transcript variant 1, mRNA.
OCLN (uc021xzq.1) at chr5:68800004-68853931 - Homo sapiens occludin (OCLN), transcript variant 3, mRNA.
OCLN (uc003jwv.4) at chr5:68788590-68853931 - Homo sapiens occludin (OCLN), transcript variant 2, mRNA.
OCLN (uc021xzs.1) at chr5:68800004-68853931 - Homo sapiens occludin (OCLN), transcript variant 2, mRNA.
CXADR (uc002yki.3) at chr21:18885224-18942429 - Homo sapiens coxsackie virus and adenovirus receptor (CXADR), transcript variant 1, mRNA.
CLDN7 (uc002gfm.4) at chr17:7163222-7166264 - Homo sapiens claudin 7 (CLDN7), transcript variant 1, mRNA.
CLDN7 (uc002gfn.4) at chr17:7163222-7166512 - Homo sapiens claudin 7 (CLDN7), transcript variant 2, mRNA.
GJD3 (uc010cwz.3) at chr17:38516905-38520945 - Homo sapiens gap junction protein, delta 3, 31.9kDa (GJD3), mRNA.
KIRREL (uc001frn.4) at chr1:157963063-158065844 - Homo sapiens kin of IRRE like (Drosophila) (KIRREL), mRNA.
GJC2 (uc001hsk.3) at chr1:228337415-228347527 - Homo sapiens gap junction protein, gamma 2, 47kDa (GJC2), mRNA.
GJC2 (uc021pkg.1) at chr1:228345460-228346779 - Homo sapiens gap junction protein, gamma 2, 47kDa (GJC2), mRNA.
PTPRJ (uc001ngp.4) at chr11:48002110-48192394 - Homo sapiens protein tyrosine phosphatase, receptor type, J (PTPRJ), transcript variant 1, mRNA.
CLDN8 (uc002ynu.2) at chr21:31586324-31588469 - Homo sapiens claudin 8 (CLDN8), mRNA.
CLDN3 (uc003tzg.4) at chr7:73183327-73184600 - Homo sapiens claudin 3 (CLDN3), mRNA.
CLDN6 (uc002csu.4) at chr16:3064713-3068188 - Homo sapiens claudin 6 (CLDN6), mRNA.
CLDN6 (uc021tbb.1) at chr16:3065360-3066022 - Homo sapiens claudin 6 (CLDN6), mRNA.
FRMPD2 (uc001jgi.3) at chr10:49364601-49482941 - Homo sapiens FERM and PDZ domain containing 2 (FRMPD2), transcript variant 3, mRNA.
FRMPD2 (uc001jgj.3) at chr10:49364601-49482941 - Homo sapiens FERM and PDZ domain containing 2 (FRMPD2), transcript variant 3, mRNA.
BVES (uc003pqx.3) at chr6:105544699-105584543 - Homo sapiens blood vessel epicardial substance (BVES), transcript variant A, mRNA.
BVES (uc003pqy.3) at chr6:105544699-105585049 - Homo sapiens blood vessel epicardial substance (BVES), transcript variant C, mRNA.
BVES (uc003pqw.3) at chr6:105544699-105584221 - Homo sapiens blood vessel epicardial substance (BVES), transcript variant B, mRNA.
CDC42BPB (uc001ymi.1) at chr14:103398716-103523742 - Homo sapiens CDC42 binding protein kinase beta (DMPK-like) (CDC42BPB), mRNA.
CLDN1 (uc003fsh.3) at chr3:190023490-190040235 - Homo sapiens claudin 1 (CLDN1), mRNA.
GJA1 (uc003pyr.3) at chr6:121756745-121770873 - Homo sapiens gap junction protein, alpha 1, 43kDa (GJA1), mRNA.
GJA1 (uc021zel.1) at chr6:121767994-121769142 - Homo sapiens gap junction protein, alpha 1, 43kDa (GJA1), mRNA.
ACTN4 (uc002oja.2) at chr19:39138267-39221171 - Homo sapiens actinin, alpha 4 (ACTN4), mRNA.
ACTN4 (uc010egc.2) at chr19:39138267-39212518 - Homo sapiens actinin, alpha 4 (ACTN4), mRNA.

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001301026.1 at chr15:29991571-30113751
NM_001330239.1 at chr15:29991571-30114706
NM_003257.4 at chr15:29991571-30114706
NM_175610.3 at chr15:29991571-30114706
NM_001301025.1 at chr15:29991571-30261002

RefSeq Genes

TJP1 at chr15:29991571-30261252 - (NM_001355012) tight junction protein ZO-1 isoform f
TJP1 at chr15:29991571-30114671 - (NM_001355015) tight junction protein ZO-1 isoform i
TJP1 at chr15:29991571-30113682 - (NM_001301026) tight junction protein ZO-1 isoform d
TJP1 at chr15:29991571-30261252 - (NM_001301025) tight junction protein ZO-1 isoform c
TJP1 at chr15:29991571-30112877 - (NM_001355013) tight junction protein ZO-1 isoform g
TJP1 at chr15:29991571-30114671 - (NM_003257) tight junction protein ZO-1 isoform a
TJP1 at chr15:29991571-30114671 - (NM_001355014) tight junction protein ZO-1 isoform h
TJP1 at chr15:29991571-30114671 - (NM_001330239) tight junction protein ZO-1 isoform e
TJP1 at chr15:29991571-30114671 - (NM_175610) tight junction protein ZO-1 isoform b

NCBI RefSeq other annotations (not NM_*, NR_*, XM_*, XR_*, NP_* or YP_*)

TJP1P1 at chr16:1421114-1421884

Non-Human RefSeq Genes

TJP1 at chr15:29992357-30114243 - (NM_001003140) tight junction protein ZO-1
Tjp1 at chr15:29992358-30092907 - (NM_001106266) tight junction protein ZO-1
Tjp1 at chr15:29992364-30114663 - (NM_001163574) tight junction protein ZO-1 isoform 2
Tjp1 at chr15:29992364-30114663 - (NM_009386) tight junction protein ZO-1 isoform 1

Basic Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29992364-30114706
TJP1 at chr15:29993799-30114231
TJP1 at chr15:30051106-30114705

Comprehensive Gene Annotation Set from GENCODE Version 31lift37 (Ensembl 97)

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29992364-30114706
TJP1 at chr15:29993449-30001026
TJP1 at chr15:29993799-30114231
TJP1 at chr15:30011097-30012332
TJP1 at chr15:30024338-30025137
TJP1 at chr15:30033226-30035233
TJP1 at chr15:30051106-30114705
TJP1 at chr15:30058643-30261068
TJP1 at chr15:30092699-30248497

Basic Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29992364-30114706
TJP1 at chr15:29993799-30114231
TJP1 at chr15:30051106-30114705

Comprehensive Gene Annotation Set from GENCODE Version 28lift37 (Ensembl 92)

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29992364-30114706
TJP1 at chr15:29993449-30001026
TJP1 at chr15:29993799-30114231
TJP1 at chr15:30011097-30012332
TJP1 at chr15:30024338-30025137
TJP1 at chr15:30033226-30035233
TJP1 at chr15:30051106-30114705
TJP1 at chr15:30058643-30261068
TJP1 at chr15:30092699-30248497

Basic Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29992364-30114706
TJP1 at chr15:29993799-30114231
TJP1 at chr15:30051106-30114705

Comprehensive Gene Annotation Set from GENCODE Version 27lift37 (Ensembl 90)

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29992364-30114706
TJP1 at chr15:29993449-30001026
TJP1 at chr15:29993799-30114231
TJP1 at chr15:30011097-30012332
TJP1 at chr15:30024338-30025137
TJP1 at chr15:30033226-30035233
TJP1 at chr15:30051106-30114705
TJP1 at chr15:30058643-30261068
TJP1 at chr15:30092699-30248497

Basic Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29992364-30114706
TJP1 at chr15:29993799-30114231
TJP1 at chr15:30051106-30114705

Comprehensive Gene Annotation Set from GENCODE Version 24lift37 (Ensembl 83)

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29992364-30114706
TJP1 at chr15:29993449-30001026
TJP1 at chr15:29993799-30114231
TJP1 at chr15:30011097-30012332
TJP1 at chr15:30024338-30025137
TJP1 at chr15:30033226-30035233
TJP1 at chr15:30051106-30114705
TJP1 at chr15:30058643-30261068
TJP1 at chr15:30092699-30248497

Basic Gene Annotation Set from GENCODE Version 19

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29993799-30114231
TJP1 at chr15:30051106-30114705

Comprehensive Gene Annotation Set from GENCODE Version 19

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29993449-30001026
TJP1 at chr15:29993799-30114231
TJP1 at chr15:29995564-29996418
TJP1 at chr15:30011097-30012332
TJP1 at chr15:30024338-30025137
TJP1 at chr15:30033226-30035233
TJP1 at chr15:30051106-30114705
TJP1 at chr15:30058643-30261068
TJP1 at chr15:30092699-30248497

Basic Gene Annotation Set from ENCODE/GENCODE Version 17

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29993799-30114231
TJP1 at chr15:30051106-30114705

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 17

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29993449-30001026
TJP1 at chr15:29993799-30114231
TJP1 at chr15:29995564-29996418
TJP1 at chr15:30011097-30012332
TJP1 at chr15:30024338-30025137
TJP1 at chr15:30033226-30035233
TJP1 at chr15:30051106-30114705
TJP1 at chr15:30058643-30261068
TJP1 at chr15:30092699-30248497

Basic Gene Annotation Set from ENCODE/GENCODE Version 14

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29993799-30114231
TJP1 at chr15:30051106-30114705

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 14

TJP1 at chr15:29991571-30114706
TJP1 at chr15:29992356-30113751
TJP1 at chr15:29992359-30114231
TJP1 at chr15:29993449-30001026
TJP1 at chr15:29993799-30114231
TJP1 at chr15:29995564-29996418
TJP1 at chr15:30011097-30012332
TJP1 at chr15:30024338-30025137
TJP1 at chr15:30033226-30035233
TJP1 at chr15:30051106-30114705
TJP1 at chr15:30058643-30261068
TJP1 at chr15:30092699-30248497

Basic Gene Annotation Set from ENCODE/GENCODE Version 7

TJP1 at chr15:29991571-30113751
TJP1 at chr15:29991571-30114682
TJP1 at chr15:29992356-30104723
TJP1 at chr15:29992356-30114706
TJP1 at chr15:29992356-30114706
TJP1 at chr15:30051102-30114705

Comprehensive Gene Annotation Set from ENCODE/GENCODE Version 7

TJP1 at chr15:29991571-30113751
TJP1 at chr15:29991571-30114682
TJP1 at chr15:29992356-30104723
TJP1 at chr15:29992356-30114706
TJP1 at chr15:29992356-30114706
TJP1 at chr15:30024338-30025137
TJP1 at chr15:30033226-30035233
TJP1 at chr15:30051102-30114705
TJP1 at chr15:30092699-30248497

International Knockout Mouse Consortium Genes Mapped to Human Genome

Tjp1_23594 at chr15:29992356-30114706
Tjp1_23595 at chr15:29992356-30114706
Tjp1_23596 at chr15:29992356-30114706
Tjp1_65783 at chr15:29992356-30114706
Tjp1_79311 at chr15:29992356-30114706
Tjp1_89884 at chr15:29992356-30114706

Alias of STS Marker

TJP1 at chr15:29892529-30092618 - (TJP1)

Human Aligned mRNA Search Results

AB370197 - Homo sapiens TJP1 mRNA for tight junction protein ZO-1, partial cds.
BC111712 - Homo sapiens tight junction protein 1 (zona occludens 1), mRNA (cDNA clone MGC:133289 IMAGE:40037646), complete cds.

Non-Human Aligned mRNA Search Results

BC013769 - Mus musculus tight junction protein 1, mRNA (cDNA clone IMAGE:2650771), partial cds.
BC138028 - Mus musculus tight junction protein 1, mRNA (cDNA clone MGC:169652 IMAGE:8861047), complete cds.
GU324312 - Varecia variegata variegata TJP1-like protein mRNA, partial cds.
KJ420409 - Eptesicus fuscus isolate EF6 tight junction protein ZO-1 (TJP1) mRNA, partial cds.
KJ420410 - Eptesicus fuscus isolate EF7 tight junction protein ZO-1 (TJP1) mRNA, partial cds.
KJ420412 - Atelerix albiventris isolate He4 tight junction protein ZO-1 (TJP1) mRNA, partial cds.
KJ420411 - Microtus pennsylvanicus isolate MP10 tight junction protein ZO-1 (TJP1) mRNA, partial cds.
JU336140 - TSA: Macaca mulatta Mamu_503446 mRNA sequence.
JU336141 - TSA: Macaca mulatta Mamu_503445 mRNA sequence.
JV048090 - TSA: Macaca mulatta Mamu_405220 mRNA sequence.
JV048091 - TSA: Macaca mulatta Mamu_405219 mRNA sequence.
KF906441 - Myotis lucifugus isolate ML45 tight junction protein ZO-1 (Tjp1) mRNA, partial cds.
KF906442 - Myotis lucifugus isolate ML47 tight junction protein ZO-1 (Tjp1) mRNA, partial cds.
KF906444 - Myotis lucifugus isolate ML55 tight junction protein ZO-1 (Tjp1) mRNA, partial cds.
KF906440 - Peromyscus leucopus isolate PL16 tight junction protein ZO-1 (Tjp1) mRNA, partial cds.

Ensembl Genes

TJP1 at chr15:30058643-30261068 - (ENST00000558447)
TJP1 at chr15:30033226-30035233 - (ENST00000485381)
TJP1 at chr15:30011097-30012332 - (ENST00000561307)
TJP1 at chr15:29993799-30114231 - (ENST00000545208)
TJP1 at chr15:29992359-30114231 - (ENST00000356107)
TJP1 at chr15:29991571-30114706 - (ENST00000346128)
TJP1 at chr15:29992356-30113751 - (ENST00000400011)
TJP1 at chr15:29993449-30001026 - (ENST00000400007)
TJP1 at chr15:29995564-29996418 - (ENST00000579042)
TJP1 at chr15:30024338-30025137 - (ENST00000462916)
TJP1 at chr15:30051106-30114705 - (ENST00000495972)
TJP1 at chr15:30092699-30248497 - (ENST00000473741)

Vega Protein-Coding Annotations

OTTHUMT00000268241 at chr15:29991571-30113751
OTTHUMT00000268237 at chr15:29991571-30114682
OTTHUMT00000268245 at chr15:30024338-30025137
OTTHUMT00000268244 at chr15:30033226-30035233
OTTHUMT00000268242 at chr15:30051102-30114705
OTTHUMT00000268243 at chr15:30092699-30248497