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Gencode Genes

TGFB1I1 (ENST00000361773.7) at chr16:31472208-31477960 - Homo sapiens transforming growth factor beta 1 induced transcript 1 (TGFB1I1), transcript variant 3, mRNA. (from RefSeq NM_001164719)
TGFB1I1 (ENST00000569703.5) at chr16:31472175-31476288 - transforming growth factor beta 1 induced transcript 1 (from HGNC TGFB1I1)
TGFB1I1 (ENST00000569254.5) at chr16:31472157-31474239 - transforming growth factor beta 1 induced transcript 1 (from HGNC TGFB1I1)
TGFB1I1 (ENST00000568142.2) at chr16:31473434-31476802 - transforming growth factor beta 1 induced transcript 1 (from HGNC TGFB1I1)
TGFB1I1 (ENST00000567607.5) at chr16:31473426-31477958 - Functions as a molecular adapter coordinating multiple  protein-protein interactions at the focal adhesion complex and in  the nucleus. Links various intracellular signaling modules to  plasma membrane receptors and regulates the Wnt and TGFB signaling  pathways. May also regulate SLC6A3 and SLC6A4 targeting to the  plasma membrane hence regulating their activity. In the nucleus,  functions as a nuclear receptor coactivator regulating  glucocorticoid, androgen, mineralocorticoid and progesterone  receptor transcriptional activity. May play a role in the  processes of cell growth, proliferation, migration,  differentiation and senescence. May have a zinc-dependent DNA-  binding activity. (from UniProt O43294)
TGFB1I1 (ENST00000567524.1) at chr16:31472141-31473939 - transforming growth factor beta 1 induced transcript 1 (from HGNC TGFB1I1)
TGFB1I1 (ENST00000567066.6) at chr16:31472030-31477600 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H3BRP2)
TGFB1I1 (ENST00000565454.5) at chr16:31471585-31474590 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H3BSN4)
TGFB1I1 (ENST00000565360.5) at chr16:31472168-31474759 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H3BQC4)
TGFB1I1 (ENST00000564804.1) at chr16:31473440-31477906 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H3BN49)
TGFB1I1 (ENST00000564176.5) at chr16:31472171-31477958 - transforming growth factor beta 1 induced transcript 1 (from HGNC TGFB1I1)
TGFB1I1 (ENST00000563712.6) at chr16:31472154-31477600 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt I3L209)
TGFB1I1 (ENST00000562566.5) at chr16:31473080-31473972 - The sequence shown here is derived from an Ensembl  automatic analysis pipeline and should be considered as  preliminary data. (from UniProt H3BS04)
TGFB1I1 (ENST00000562165.5) at chr16:31472171-31474100 - transforming growth factor beta 1 induced transcript 1 (from HGNC TGFB1I1)
TGFB1I1 (ENST00000561785.5) at chr16:31472155-31474095 - transforming growth factor beta 1 induced transcript 1 (from HGNC TGFB1I1)
TGFB1I1 (ENST00000394863.8) at chr16:31472152-31477958 - Homo sapiens transforming growth factor beta 1 induced transcript 1 (TGFB1I1), transcript variant 1, mRNA. (from RefSeq NM_001042454)
TGFB1I1 (ENST00000394858.6) at chr16:31473205-31477960 - Homo sapiens transforming growth factor beta 1 induced transcript 1 (TGFB1I1), transcript variant 2, mRNA. (from RefSeq NM_015927)
NUDT16L1 (ENST00000405142.1) at chr16:4693718-4695855 - Probable adapter protein, which may link syndecan-4  (SDC4) and paxilin (TGFB1I1 and PXN) receptors (By similarity). (from UniProt Q9BRJ7)
NUDT16L1 (ENST00000304301.10) at chr16:4693694-4695859 - Homo sapiens nudix hydrolase 16 like 1 (NUDT16L1), transcript variant 1, mRNA. (from RefSeq NM_032349)
LIMS2 (ENST00000409286.5) at chr2:127638426-127643228 - Competes with LIMS1 for binding to ILK. Plays a role in  modulating cell spreading and migration. (from UniProt Q7Z4I7)
LIMS2 (ENST00000409254.1) at chr2:127639197-127650538 - Competes with LIMS1 for binding to ILK. Plays a role in  modulating cell spreading and migration. (from UniProt Q7Z4I7)
SLC6A3 (ENST00000621716.2) at chr5_KI270791v1_alt:64343-121219 - Amine transporter. Terminates the action of dopamine by  its high affinity sodium-dependent reuptake into presynaptic  terminals. (from UniProt Q01959)
MAPK15 (ENST00000395108.2) at chr8:143716378-143720591 - In vitro, phosphorylates MBP. (from UniProt Q8TD08)
MAPK15 (ENST00000395107.8) at chr8:143716378-143720291 - In vitro, phosphorylates MBP. (from UniProt Q8TD08)
LIMS2 (ENST00000409808.6) at chr2:127638428-127675286 - Competes with LIMS1 for binding to ILK. Plays a role in  modulating cell spreading and migration. (from UniProt Q7Z4I7)
LIMS2 (ENST00000409754.5) at chr2:127638426-127644110 - Competes with LIMS1 for binding to ILK. Plays a role in  modulating cell spreading and migration. (from UniProt Q7Z4I7)
LIMS2 (ENST00000409455.5) at chr2:127638428-127674309 - Competes with LIMS1 for binding to ILK. Plays a role in  modulating cell spreading and migration. (from UniProt Q7Z4I7)
MAPK15 (ENST00000615253.4) at chr8_KI270816v1_alt:193306-199505 - Homo sapiens mitogen-activated protein kinase 15 (MAPK15), mRNA. (from RefSeq NM_139021)
MAPK15 (ENST00000338033.9) at chr8:143716349-143722458 - Homo sapiens mitogen-activated protein kinase 15 (MAPK15), mRNA. (from RefSeq NM_139021)
CRIP2 (ENST00000329146.8) at chr14:105474150-105480170 - Homo sapiens cysteine rich protein 2 (CRIP2), transcript variant 1, mRNA. (from RefSeq NM_001312)
CRIP2 (ENST00000483017.7) at chr14:105472962-105479694 - Homo sapiens cysteine rich protein 2 (CRIP2), transcript variant 5, non-coding RNA. (from RefSeq NR_073082)
LIMS2 (ENST00000545738.6) at chr2:127638721-127675102 - Homo sapiens LIM zinc finger domain containing 2 (LIMS2), transcript variant 1, mRNA. (from RefSeq NM_001136037)
LIMS2 (ENST00000355119.8) at chr2:127638428-127675190 - Homo sapiens LIM zinc finger domain containing 2 (LIMS2), transcript variant 3, mRNA. (from RefSeq NM_001161403)
LIMS2 (ENST00000410011.5) at chr2:127638428-127681786 - Homo sapiens LIM zinc finger domain containing 2 (LIMS2), transcript variant 5, mRNA. (from RefSeq NM_001161404)
LIMS2 (ENST00000324938.9) at chr2:127638426-127664546 - Homo sapiens LIM zinc finger domain containing 2 (LIMS2), transcript variant 2, mRNA. (from RefSeq NM_017980)
LIMS2 (ENST00000410038.5) at chr2:127638470-127648253 - Homo sapiens LIM zinc finger domain containing 2 (LIMS2), transcript variant 4, mRNA. (from RefSeq NM_001256542)
GIT1 (ENST00000225394.7) at chr17:29573469-29589627 - Homo sapiens GIT ArfGAP 1 (GIT1), transcript variant 2, mRNA. (from RefSeq NM_014030)
GIT1 (ENST00000394869.7) at chr17:29573475-29589549 - Homo sapiens GIT ArfGAP 1 (GIT1), transcript variant 1, mRNA. (from RefSeq NM_001085454)
SLC6A4 (ENST00000401766.6) at chr17:30194319-30236002 - Serotonin transporter whose primary function in the  central nervous system involves the regulation of serotonergic  signaling via transport of serotonin molecules from the synaptic  cleft back into the pre-synaptic terminal for re-utilization.  Plays a key role in mediating regulation of the availability of  serotonin to other receptors of serotonergic systems. Terminates  the action of serotonin and recycles it in a sodium-dependent  manner. (from UniProt P31645)
SLC6A4 (ENST00000261707.7) at chr17:30194321-30235968 - Serotonin transporter whose primary function in the  central nervous system involves the regulation of serotonergic  signaling via transport of serotonin molecules from the synaptic  cleft back into the pre-synaptic terminal for re-utilization.  Plays a key role in mediating regulation of the availability of  serotonin to other receptors of serotonergic systems. Terminates  the action of serotonin and recycles it in a sodium-dependent  manner. (from UniProt P31645)
PXN (ENST00000267257.11) at chr12:120210439-120265771 - Homo sapiens paxillin (PXN), transcript variant 3, mRNA. (from RefSeq NM_001243756)
PXN (ENST00000228307.11) at chr12:120210447-120265771 - Homo sapiens paxillin (PXN), transcript variant 2, mRNA. (from RefSeq NM_001080855)
NCK2 (ENST00000393349.2) at chr2:105851782-105894272 - Homo sapiens NCK adaptor protein 2 (NCK2), transcript variant 2, mRNA. (from RefSeq NM_001004720)
PXN (ENST00000458477.6) at chr12:120210447-120250161 - Homo sapiens paxillin (PXN), transcript variant 4, mRNA. (from RefSeq NM_025157)
PXN (ENST00000424649.6) at chr12:120210447-120265771 - Homo sapiens paxillin (PXN), transcript variant 1, mRNA. (from RefSeq NM_002859)
NCK2 (ENST00000233154.9) at chr2:105744912-105894272 - Homo sapiens NCK adaptor protein 2 (NCK2), transcript variant 1, mRNA. (from RefSeq NM_003581)
ARHGEF7 (ENST00000375723.5) at chr13:111205289-111295192 - Homo sapiens Rho guanine nucleotide exchange factor 7 (ARHGEF7), transcript variant 26, mRNA. (from RefSeq NM_001354060)
ARHGEF7 (ENST00000375741.6) at chr13:111115277-111295195 - Homo sapiens Rho guanine nucleotide exchange factor 7 (ARHGEF7), transcript variant 3, mRNA. (from RefSeq NM_001113511)
ARHGEF7 (ENST00000375739.6) at chr13:111115277-111295195 - Homo sapiens Rho guanine nucleotide exchange factor 7 (ARHGEF7), transcript variant 4, mRNA. (from RefSeq NM_001113512)
GIT2 (ENST00000553118.5) at chr12:109932615-109996389 - Homo sapiens GIT ArfGAP 2 (GIT2), transcript variant 2, mRNA. (from RefSeq NM_057170)
GIT2 (ENST00000457474.6) at chr12:109929804-109996295 - Homo sapiens GIT ArfGAP 2 (GIT2), transcript variant 6, mRNA. (from RefSeq NM_001135213)
GIT2 (ENST00000361006.9) at chr12:109929804-109996304 - Homo sapiens GIT ArfGAP 2 (GIT2), transcript variant 5, mRNA. (from RefSeq NM_001135214)
ARHGEF7 (ENST00000317133.9) at chr13:111114619-111293436 - Homo sapiens Rho guanine nucleotide exchange factor 7 (ARHGEF7), transcript variant 2, mRNA. (from RefSeq NM_145735)
GIT2 (ENST00000355312.8) at chr12:109929804-109996368 - Homo sapiens GIT ArfGAP 2 (GIT2), transcript variant 1, mRNA. (from RefSeq NM_057169)
ARHGEF7 (ENST00000375736.8) at chr13:111153738-111305731 - Homo sapiens Rho guanine nucleotide exchange factor 7 (ARHGEF7), transcript variant 1, mRNA. (from RefSeq NM_003899)
ARHGEF7 (ENST00000426073.6) at chr13:111186854-111305737 - Homo sapiens Rho guanine nucleotide exchange factor 7 (ARHGEF7), transcript variant 5, mRNA. (from RefSeq NM_001113513)
TCF7L2 (ENST00000352065.10) at chr10:112950660-113165612 - Homo sapiens transcription factor 7 like 2 (TCF7L2), transcript variant 15, mRNA. (from RefSeq NM_001349871)
TCF7L2 (ENST00000369397.8) at chr10:112950452-113167678 - Homo sapiens transcription factor 7 like 2 (TCF7L2), transcript variant 2, mRNA. (from RefSeq NM_030756)
PTPN12 (ENST00000435495.6) at chr7:77538069-77639620 - Homo sapiens protein tyrosine phosphatase non-receptor type 12 (PTPN12), transcript variant 3, mRNA. (from RefSeq NM_001131009)
PTPN12 (ENST00000415482.6) at chr7:77538035-77639280 - Homo sapiens protein tyrosine phosphatase non-receptor type 12 (PTPN12), transcript variant 2, mRNA. (from RefSeq NM_001131008)
TCF7L2 (ENST00000627217.3) at chr10:112950247-113167678 - Homo sapiens transcription factor 7 like 2 (TCF7L2), transcript variant 1, mRNA. (from RefSeq NM_001146274)
TCF7L2 (ENST00000355717.9) at chr10:112950586-113165972 - Homo sapiens transcription factor 7 like 2 (TCF7L2), transcript variant 6, mRNA. (from RefSeq NM_001146286)
PTPN12 (ENST00000248594.11) at chr7:77537295-77640069 - Homo sapiens protein tyrosine phosphatase non-receptor type 12 (PTPN12), transcript variant 1, mRNA. (from RefSeq NM_002835)
PARVA (ENST00000334956.15) at chr11:12377571-12535356 - Homo sapiens parvin alpha (PARVA), mRNA. (from RefSeq NM_018222)
LIMS1 (ENST00000338045.7) at chr2:108654812-108684448 - Homo sapiens LIM zinc finger domain containing 1 (LIMS1), transcript variant 1, mRNA. (from RefSeq NM_001193485)
LIMS1 (ENST00000393310.5) at chr2:108588466-108687246 - Homo sapiens LIM zinc finger domain containing 1 (LIMS1), transcript variant 3, mRNA. (from RefSeq NM_001193488)
LIMS1 (ENST00000544547.5) at chr2:108534355-108687238 - Homo sapiens LIM zinc finger domain containing 1 (LIMS1), transcript variant 5, mRNA. (from RefSeq NM_001193483)
LIMS1 (ENST00000410093.5) at chr2:108607161-108684448 - Homo sapiens LIM zinc finger domain containing 1 (LIMS1), transcript variant 4, mRNA. (from RefSeq NM_001193482)
LIMS1 (ENST00000409441.5) at chr2:108621266-108684448 - Homo sapiens LIM zinc finger domain containing 1 (LIMS1), transcript variant 6, mRNA. (from RefSeq NM_001193484)
LIMS1 (ENST00000332345.10) at chr2:108588311-108684137 - Homo sapiens LIM zinc finger domain containing 1 (LIMS1), transcript variant 2, mRNA. (from RefSeq NM_004987)
TCF3 (ENST00000395423.7) at chr19:1611249-1652604 - Transcriptional regulator. Involved in the initiation of  neuronal differentiation. Heterodimers between TCF3 and tissue-  specific basic helix-loop-helix (bHLH) proteins play major roles  in determining tissue-specific cell fate during embryogenesis,  like muscle or early B-cell differentiation. Dimers bind DNA on E-  box motifs: 5'-CANNTG-3'. Binds to the kappa-E2 site in the kappa  immunoglobulin gene enhancer. Binds to IEB1 and IEB2, which are  short DNA sequences in the insulin gene transcription control  region. (from UniProt P15923)
TCF3 (ENST00000611869.5) at chr19:1609290-1650287 - Transcriptional regulator. Involved in the initiation of  neuronal differentiation. Heterodimers between TCF3 and tissue-  specific basic helix-loop-helix (bHLH) proteins play major roles  in determining tissue-specific cell fate during embryogenesis,  like muscle or early B-cell differentiation. Dimers bind DNA on E-  box motifs: 5'-CANNTG-3'. Binds to the kappa-E2 site in the kappa  immunoglobulin gene enhancer. Binds to IEB1 and IEB2, which are  short DNA sequences in the insulin gene transcription control  region. (from UniProt P15923)
TCF7L2 (ENST00000355995.8) at chr10:112950250-113167678 - Homo sapiens transcription factor 7 like 2 (TCF7L2), transcript variant 17, mRNA. (from RefSeq NM_001367943)
SLC6A3 (ENST00000270349.12) at chr5:1392794-1445440 - Homo sapiens solute carrier family 6 member 3 (SLC6A3), mRNA. (from RefSeq NM_001044)
PPARG (ENST00000650650.1) at chr3:12379706-12417154 - Receptor that binds peroxisome proliferators such as  hypolipidemic drugs and fatty acids. Once activated by a ligand,  the receptor binds to a promoter element in the gene for acyl-CoA  oxidase and activates its transcription. It therefore controls the  peroxisomal beta-oxidation pathway of fatty acids. Key regulator  of adipocyte differentiation and glucose homeostasis. Acts as a  critical regulator of gut homeostasis by suppressing NF-kappa-B-  mediated proinflammatory responses. (from UniProt P37231)
ILK (ENST00000532063.5) at chr11:6603708-6610874 - Homo sapiens integrin linked kinase (ILK), transcript variant 5, mRNA. (from RefSeq NM_001278442)
ITGA4 (ENST00000339307.8) at chr2:181457207-181476218 - Homo sapiens integrin subunit alpha 4 (ITGA4), transcript variant 2, mRNA. (from RefSeq NM_001316312)
ILK (ENST00000528995.5) at chr11:6603787-6610866 - Homo sapiens integrin linked kinase (ILK), transcript variant 4, mRNA. (from RefSeq NM_001278441)
ITGA4 (ENST00000397033.7) at chr2:181457386-181538940 - Homo sapiens integrin subunit alpha 4 (ITGA4), transcript variant 1, mRNA. (from RefSeq NM_000885)
TCF7L2 (ENST00000538897.5) at chr10:112950250-113167678 - Homo sapiens transcription factor 7 like 2 (TCF7L2), transcript variant 16, mRNA. (from RefSeq NM_001363501)
PPARG (ENST00000651826.1) at chr3:12287850-12434356 - Homo sapiens peroxisome proliferator activated receptor gamma (PPARG), transcript variant 4, mRNA. (from RefSeq NM_005037)
PPARG (ENST00000650761.1) at chr3:12287850-12434356 - Homo sapiens peroxisome proliferator activated receptor gamma (PPARG), transcript variant 1, mRNA. (from RefSeq NM_138712)
CSK (ENST00000439220.6) at chr15:74782089-74802882 - Homo sapiens C-terminal Src kinase (CSK), transcript variant 2, mRNA. (from RefSeq NM_001127190)
CSK (ENST00000220003.13) at chr15:74782057-74803198 - Homo sapiens C-terminal Src kinase (CSK), transcript variant 1, mRNA. (from RefSeq NM_004383)
PPARG (ENST00000287820.10) at chr3:12351472-12434356 - Homo sapiens peroxisome proliferator activated receptor gamma (PPARG), transcript variant 2, mRNA. (from RefSeq NM_015869)
PPARG (ENST00000397012.7) at chr3:12288838-12434356 - Homo sapiens peroxisome proliferator activated receptor gamma (PPARG), transcript variant 3, mRNA. (from RefSeq NM_138711)
AR (ENST00000504326.5) at chrX:67544820-67696075 - Homo sapiens androgen receptor (AR), transcript variant 3, mRNA. (from RefSeq NM_001348061)
AR (ENST00000396043.2) at chrX:67568889-67724288 - Homo sapiens androgen receptor (AR), transcript variant 2, mRNA. (from RefSeq NM_001011645)
AR (ENST00000374690.9) at chrX:67544021-67730619 - Homo sapiens androgen receptor (AR), transcript variant 1, mRNA. (from RefSeq NM_000044)
TRAF4 (ENST00000262395.10) at chr17:28744011-28750956 - Homo sapiens TNF receptor associated factor 4 (TRAF4), mRNA. (from RefSeq NM_004295)
TCF3 (ENST00000262965.11) at chr19:1609292-1652615 - Homo sapiens transcription factor 3 (TCF3), transcript variant 1, mRNA. (from RefSeq NM_003200)
SMAD3 (ENST00000540846.6) at chr15:67125716-67190762 - Homo sapiens SMAD family member 3 (SMAD3), transcript variant 2, mRNA. (from RefSeq NM_001145102)
SMAD3 (ENST00000537194.6) at chr15:67166019-67190762 - Homo sapiens SMAD family member 3 (SMAD3), transcript variant 4, mRNA. (from RefSeq NM_001145104)
SMAD3 (ENST00000439724.7) at chr15:67138001-67190894 - Homo sapiens SMAD family member 3 (SMAD3), transcript variant 3, mRNA. (from RefSeq NM_001145103)
TCF3 (ENST00000588136.7) at chr19:1609292-1652615 - Homo sapiens transcription factor 3 (TCF3), transcript variant 4, mRNA. (from RefSeq NM_001351779)
SMAD3 (ENST00000327367.9) at chr15:67065602-67195169 - Homo sapiens SMAD family member 3 (SMAD3), transcript variant 1, mRNA. (from RefSeq NM_005902)
CSK (ENST00000567571.5) at chr15:74788544-74803171 - Homo sapiens C-terminal Src kinase (CSK), transcript variant 3, mRNA. (from RefSeq NM_001354988)
SLC6A4 (ENST00000650711.1) at chr17:30194319-30235697 - Homo sapiens solute carrier family 6 member 4 (SLC6A4), mRNA. (from RefSeq NM_001045)
NR3C1 (ENST00000424646.6) at chr5:143279567-143400852 - Homo sapiens nuclear receptor subfamily 3 group C member 1 (NR3C1), transcript variant 8, mRNA. (from RefSeq NM_001204265)
NR3C1 (ENST00000343796.6) at chr5:143277931-143435512 - Homo sapiens nuclear receptor subfamily 3 group C member 1 (NR3C1), transcript variant 5, mRNA. (from RefSeq NM_001018077)
NR3C1 (ENST00000415690.6) at chr5:143277936-143403329 - Homo sapiens nuclear receptor subfamily 3 group C member 1 (NR3C1), transcript variant 6, mRNA. (from RefSeq NM_001020825)
NR3C1 (ENST00000394466.6) at chr5:143281138-143404129 - Homo sapiens nuclear receptor subfamily 3 group C member 1 (NR3C1), transcript variant 13, mRNA. (from RefSeq NM_001364184)
NR3C1 (ENST00000231509.7) at chr5:143281162-143403689 - Homo sapiens nuclear receptor subfamily 3 group C member 1 (NR3C1), transcript variant 14, mRNA. (from RefSeq NM_001364185)
NR3C1 (ENST00000504572.5) at chr5:143281120-143434702 - Homo sapiens nuclear receptor subfamily 3 group C member 1 (NR3C1), transcript variant 12, mRNA. (from RefSeq NM_001364183)
NR3C1 (ENST00000394464.7) at chr5:143277934-143403686 - Homo sapiens nuclear receptor subfamily 3 group C member 1 (NR3C1), transcript variant 11, mRNA. (from RefSeq NM_001364182)
NR3C1 (ENST00000503201.1) at chr5:143281811-143404544 - Homo sapiens nuclear receptor subfamily 3 group C member 1 (NR3C1), transcript variant 15, non-coding RNA. (from RefSeq NR_157096)
PTK2 (ENST00000521059.5) at chr8:140658402-141001196 - Homo sapiens protein tyrosine kinase 2 (PTK2), transcript variant 2, mRNA. (from RefSeq NM_005607)
PTK2 (ENST00000522684.5) at chr8:140657900-141001233 - Homo sapiens protein tyrosine kinase 2 (PTK2), transcript variant 1, mRNA. (from RefSeq NM_153831)
PTK2B (ENST00000420218.3) at chr8:27325564-27459391 - Homo sapiens protein tyrosine kinase 2 beta (PTK2B), transcript variant 4, mRNA. (from RefSeq NM_173175)
PTK2B (ENST00000397501.5) at chr8:27311482-27459390 - Homo sapiens protein tyrosine kinase 2 beta (PTK2B), transcript variant 1, mRNA. (from RefSeq NM_173174)
PTK2B (ENST00000346049.10) at chr8:27325552-27459386 - Homo sapiens protein tyrosine kinase 2 beta (PTK2B), transcript variant 3, mRNA. (from RefSeq NM_173176)
LYN (ENST00000520220.6) at chr8:55879835-56014168 - Homo sapiens LYN proto-oncogene, Src family tyrosine kinase (LYN), transcript variant 2, mRNA. (from RefSeq NM_001111097)
LYN (ENST00000519728.6) at chr8:55879835-56014169 - Homo sapiens LYN proto-oncogene, Src family tyrosine kinase (LYN), transcript variant 1, mRNA. (from RefSeq NM_002350)
PTK2 (ENST00000340930.7) at chr8:140658405-141001158 - Homo sapiens protein tyrosine kinase 2 (PTK2), transcript variant 57, mRNA. (from RefSeq NM_001352746)
SRC (ENST00000373578.6) at chr20:37346154-37406050 - Homo sapiens SRC proto-oncogene, non-receptor tyrosine kinase (SRC), transcript variant 2, mRNA. (from RefSeq NM_198291)
PTK2B (ENST00000517339.5) at chr8:27397452-27459386 - Non-receptor protein-tyrosine kinase that regulates  reorganization of the actin cytoskeleton, cell polarization, cell  migration, adhesion, spreading and bone remodeling. Plays a role  in the regulation of the humoral immune response, and is required  for normal levels of marginal B-cells in the spleen and normal  migration of splenic B-cells. Required for normal macrophage  polarization and migration towards sites of inflammation.  Regulates cytoskeleton rearrangement and cell spreading in T-  cells, and contributes to the regulation of T-cell responses.  Promotes osteoclastic bone resorption; this requires both  PTK2B/PYK2 and SRC. May inhibit differentiation and activity of  osteoprogenitor cells. Functions in signaling downstream of  integrin and collagen receptors, immune receptors, G-protein  coupled receptors (GPCR), cytokine, chemokine and growth factor  receptors, and mediates responses to cellular stress. Forms  multisubunit signaling complexes with SRC and SRC family members  upon activation; this leads to the phosphorylation of additional  tyrosine residues, creating binding sites for scaffold proteins,  effectors and substrates. Regulates numerous signaling pathways.  Promotes activation of phosphatidylinositol 3-kinase and of the  AKT1 signaling cascade. Promotes activation of NOS3. Regulates  production of the cellular messenger cGMP. Promotes activation of  the MAP kinase signaling cascade, including activation of  MAPK1/ERK2, MAPK3/ERK1 and MAPK8/JNK1. Promotes activation of Rho  family GTPases, such as RHOA and RAC1. Recruits the ubiquitin  ligase MDM2 to P53/TP53 in the nucleus, and thereby regulates  P53/TP53 activity, P53/TP53 ubiquitination and proteasomal  degradation. Acts as a scaffold, binding to both PDPK1 and SRC,  thereby allowing SRC to phosphorylate PDPK1 at 'Tyr-9, 'Tyr-373',  and 'Tyr-376'. Promotes phosphorylation of NMDA receptors by SRC  family members, and thereby contributes to the regulation of NMDA  receptor ion channel activity and intracellular Ca(2+) levels. May  also regulate potassium ion transport by phosphorylation of  potassium channel subunits. Phosphorylates SRC; this increases SRC  kinase activity. Phosphorylates ASAP1, NPHP1, KCNA2 and SHC1.  Promotes phosphorylation of ASAP2, RHOU and PXN; this requires  both SRC and PTK2/PYK2. (from UniProt Q14289)
PTK2 (ENST00000395218.3) at chr8:140658382-141001313 - Non-receptor protein-tyrosine kinase that plays an  essential role in regulating cell migration, adhesion, spreading,  reorganization of the actin cytoskeleton, formation and  disassembly of focal adhesions and cell protrusions, cell cycle  progression, cell proliferation and apoptosis. Required for early  embryonic development and placenta development. Required for  embryonic angiogenesis, normal cardiomyocyte migration and  proliferation, and normal heart development. Regulates axon growth  and neuronal cell migration, axon branching and synapse formation;  required for normal development of the nervous system. Plays a  role in osteogenesis and differentiation of osteoblasts. Functions  in integrin signal transduction, but also in signaling downstream  of numerous growth factor receptors, G-protein coupled receptors  (GPCR), EPHA2, netrin receptors and LDL receptors. Forms  multisubunit signaling complexes with SRC and SRC family members  upon activation; this leads to the phosphorylation of additional  tyrosine residues, creating binding sites for scaffold proteins,  effectors and substrates. Regulates numerous signaling pathways.  Promotes activation of phosphatidylinositol 3-kinase and the AKT1  signaling cascade. Promotes activation of MAPK1/ERK2, MAPK3/ERK1  and the MAP kinase signaling cascade. Promotes localized and  transient activation of guanine nucleotide exchange factors (GEFs)  and GTPase-activating proteins (GAPs), and thereby modulates the  activity of Rho family GTPases. Signaling via CAS family members  mediates activation of RAC1. Recruits the ubiquitin ligase MDM2 to  P53/TP53 in the nucleus, and thereby regulates P53/TP53 activity,  P53/TP53 ubiquitination and proteasomal degradation.  Phosphorylates SRC; this increases SRC kinase activity.  Phosphorylates ACTN1, ARHGEF7, GRB7, RET and WASL. Promotes  phosphorylation of PXN and STAT1; most likely PXN and STAT1 are  phosphorylated by a SRC family kinase that is recruited to  autophosphorylated PTK2/FAK1, rather than by PTK2/FAK1 itself.  Promotes phosphorylation of BCAR1; GIT2 and SHC1; this requires  both SRC and PTK2/FAK1. Promotes phosphorylation of BMX and  PIK3R1. Isoform 6 (FRNK) does not contain a kinase domain and  inhibits PTK2/FAK1 phosphorylation and signaling. Its enhanced  expression can attenuate the nuclear accumulation of LPXN and  limit its ability to enhance serum response factor (SRF)-dependent  gene transcription. (from UniProt Q05397)
SRC (ENST00000373567.6) at chr20:37383668-37406050 - Non-receptor protein tyrosine kinase which is activated  following engagement of many different classes of cellular  receptors including immune response receptors, integrins and other  adhesion receptors, receptor protein tyrosine kinases, G protein-  coupled receptors as well as cytokine receptors. Participates in  signaling pathways that control a diverse spectrum of biological  activities including gene transcription, immune response, cell  adhesion, cell cycle progression, apoptosis, migration, and  transformation. Due to functional redundancy between members of  the SRC kinase family, identification of the specific role of each  SRC kinase is very difficult. SRC appears to be one of the primary  kinases activated following engagement of receptors and plays a  role in the activation of other protein tyrosine kinase (PTK)  families. Receptor clustering or dimerization leads to recruitment  of SRC to the receptor complexes where it phosphorylates the  tyrosine residues within the receptor cytoplasmic domains. Plays  an important role in the regulation of cytoskeletal organization  through phosphorylation of specific substrates such as AFAP1.  Phosphorylation of AFAP1 allows the SRC SH2 domain to bind AFAP1  and to localize to actin filaments. Cytoskeletal reorganization is  also controlled through the phosphorylation of cortactin (CTTN).  When cells adhere via focal adhesions to the extracellular matrix,  signals are transmitted by integrins into the cell resulting in  tyrosine phosphorylation of a number of focal adhesion proteins,  including PTK2/FAK1 and paxillin (PXN). In addition to  phosphorylating focal adhesion proteins, SRC is also active at the  sites of cell-cell contact adherens junctions and phosphorylates  substrates such as beta-catenin (CTNNB1), delta-catenin (CTNND1),  and plakoglobin (JUP). Another type of cell-cell junction, the gap  junction, is also a target for SRC, which phosphorylates connexin-  43 (GJA1). SRC is implicated in regulation of pre-mRNA-processing  and phosphorylates RNA-binding proteins such as KHDRBS1. Also  plays a role in PDGF-mediated tyrosine phosphorylation of both  STAT1 and STAT3, leading to increased DNA binding activity of  these transcription factors. Involved in the RAS pathway through  phosphorylation of RASA1 and RASGRF1. Plays a role in EGF-mediated  calcium-activated chloride channel activation. Required for  epidermal growth factor receptor (EGFR) internalization through  phosphorylation of clathrin heavy chain (CLTC and CLTCL1) at 'Tyr-  1477'. Involved in beta-arrestin (ARRB1 and ARRB2) desensitization  through phosphorylation and activation of ADRBK1, leading to beta-  arrestin phosphorylation and internalization. Has a critical role  in the stimulation of the CDK20/MAPK3 mitogen-activated protein  kinase cascade by epidermal growth factor. Might be involved not  only in mediating the transduction of mitogenic signals at the  level of the plasma membrane but also in controlling progression  through the cell cycle via interaction with regulatory proteins in  the nucleus. Plays an important role in osteoclastic bone  resorption in conjunction with PTK2B/PYK2. Both the formation of a  SRC-PTK2B/PYK2 complex and SRC kinase activity are necessary for  this function. Recruited to activated integrins by PTK2B/PYK2,  thereby phosphorylating CBL, which in turn induces the activation  and recruitment of phosphatidylinositol 3-kinase to the cell  membrane in a signaling pathway that is critical for osteoclast  function. Promotes energy production in osteoclasts by activating  mitochondrial cytochrome C oxidase. Phosphorylates DDR2 on  tyrosine residues, thereby promoting its subsequent  autophosphorylation. Phosphorylates RUNX3 and COX2 on tyrosine  residues, TNK2 on 'Tyr-284' and CBL on 'Tyr-731'. Enhances  DDX58/RIG-I-elicited antiviral signaling. Phosphorylates PDPK1 at  'Tyr-9', 'Tyr-373' and 'Tyr-376'. (from UniProt P12931)
SRC (ENST00000373558.2) at chr20:37384150-37406050 - Non-receptor protein tyrosine kinase which is activated  following engagement of many different classes of cellular  receptors including immune response receptors, integrins and other  adhesion receptors, receptor protein tyrosine kinases, G protein-  coupled receptors as well as cytokine receptors. Participates in  signaling pathways that control a diverse spectrum of biological  activities including gene transcription, immune response, cell  adhesion, cell cycle progression, apoptosis, migration, and  transformation. Due to functional redundancy between members of  the SRC kinase family, identification of the specific role of each  SRC kinase is very difficult. SRC appears to be one of the primary  kinases activated following engagement of receptors and plays a  role in the activation of other protein tyrosine kinase (PTK)  families. Receptor clustering or dimerization leads to recruitment  of SRC to the receptor complexes where it phosphorylates the  tyrosine residues within the receptor cytoplasmic domains. Plays  an important role in the regulation of cytoskeletal organization  through phosphorylation of specific substrates such as AFAP1.  Phosphorylation of AFAP1 allows the SRC SH2 domain to bind AFAP1  and to localize to actin filaments. Cytoskeletal reorganization is  also controlled through the phosphorylation of cortactin (CTTN).  When cells adhere via focal adhesions to the extracellular matrix,  signals are transmitted by integrins into the cell resulting in  tyrosine phosphorylation of a number of focal adhesion proteins,  including PTK2/FAK1 and paxillin (PXN). In addition to  phosphorylating focal adhesion proteins, SRC is also active at the  sites of cell-cell contact adherens junctions and phosphorylates  substrates such as beta-catenin (CTNNB1), delta-catenin (CTNND1),  and plakoglobin (JUP). Another type of cell-cell junction, the gap  junction, is also a target for SRC, which phosphorylates connexin-  43 (GJA1). SRC is implicated in regulation of pre-mRNA-processing  and phosphorylates RNA-binding proteins such as KHDRBS1. Also  plays a role in PDGF-mediated tyrosine phosphorylation of both  STAT1 and STAT3, leading to increased DNA binding activity of  these transcription factors. Involved in the RAS pathway through  phosphorylation of RASA1 and RASGRF1. Plays a role in EGF-mediated  calcium-activated chloride channel activation. Required for  epidermal growth factor receptor (EGFR) internalization through  phosphorylation of clathrin heavy chain (CLTC and CLTCL1) at 'Tyr-  1477'. Involved in beta-arrestin (ARRB1 and ARRB2) desensitization  through phosphorylation and activation of ADRBK1, leading to beta-  arrestin phosphorylation and internalization. Has a critical role  in the stimulation of the CDK20/MAPK3 mitogen-activated protein  kinase cascade by epidermal growth factor. Might be involved not  only in mediating the transduction of mitogenic signals at the  level of the plasma membrane but also in controlling progression  through the cell cycle via interaction with regulatory proteins in  the nucleus. Plays an important role in osteoclastic bone  resorption in conjunction with PTK2B/PYK2. Both the formation of a  SRC-PTK2B/PYK2 complex and SRC kinase activity are necessary for  this function. Recruited to activated integrins by PTK2B/PYK2,  thereby phosphorylating CBL, which in turn induces the activation  and recruitment of phosphatidylinositol 3-kinase to the cell  membrane in a signaling pathway that is critical for osteoclast  function. Promotes energy production in osteoclasts by activating  mitochondrial cytochrome C oxidase. Phosphorylates DDR2 on  tyrosine residues, thereby promoting its subsequent  autophosphorylation. Phosphorylates RUNX3 and COX2 on tyrosine  residues, TNK2 on 'Tyr-284' and CBL on 'Tyr-731'. Enhances  DDX58/RIG-I-elicited antiviral signaling. Phosphorylates PDPK1 at  'Tyr-9', 'Tyr-373' and 'Tyr-376'. (from UniProt P12931)
SRC (ENST00000358208.8) at chr20:37382604-37405432 - Non-receptor protein tyrosine kinase which is activated  following engagement of many different classes of cellular  receptors including immune response receptors, integrins and other  adhesion receptors, receptor protein tyrosine kinases, G protein-  coupled receptors as well as cytokine receptors. Participates in  signaling pathways that control a diverse spectrum of biological  activities including gene transcription, immune response, cell  adhesion, cell cycle progression, apoptosis, migration, and  transformation. Due to functional redundancy between members of  the SRC kinase family, identification of the specific role of each  SRC kinase is very difficult. SRC appears to be one of the primary  kinases activated following engagement of receptors and plays a  role in the activation of other protein tyrosine kinase (PTK)  families. Receptor clustering or dimerization leads to recruitment  of SRC to the receptor complexes where it phosphorylates the  tyrosine residues within the receptor cytoplasmic domains. Plays  an important role in the regulation of cytoskeletal organization  through phosphorylation of specific substrates such as AFAP1.  Phosphorylation of AFAP1 allows the SRC SH2 domain to bind AFAP1  and to localize to actin filaments. Cytoskeletal reorganization is  also controlled through the phosphorylation of cortactin (CTTN).  When cells adhere via focal adhesions to the extracellular matrix,  signals are transmitted by integrins into the cell resulting in  tyrosine phosphorylation of a number of focal adhesion proteins,  including PTK2/FAK1 and paxillin (PXN). In addition to  phosphorylating focal adhesion proteins, SRC is also active at the  sites of cell-cell contact adherens junctions and phosphorylates  substrates such as beta-catenin (CTNNB1), delta-catenin (CTNND1),  and plakoglobin (JUP). Another type of cell-cell junction, the gap  junction, is also a target for SRC, which phosphorylates connexin-  43 (GJA1). SRC is implicated in regulation of pre-mRNA-processing  and phosphorylates RNA-binding proteins such as KHDRBS1. Also  plays a role in PDGF-mediated tyrosine phosphorylation of both  STAT1 and STAT3, leading to increased DNA binding activity of  these transcription factors. Involved in the RAS pathway through  phosphorylation of RASA1 and RASGRF1. Plays a role in EGF-mediated  calcium-activated chloride channel activation. Required for  epidermal growth factor receptor (EGFR) internalization through  phosphorylation of clathrin heavy chain (CLTC and CLTCL1) at 'Tyr-  1477'. Involved in beta-arrestin (ARRB1 and ARRB2) desensitization  through phosphorylation and activation of ADRBK1, leading to beta-  arrestin phosphorylation and internalization. Has a critical role  in the stimulation of the CDK20/MAPK3 mitogen-activated protein  kinase cascade by epidermal growth factor. Might be involved not  only in mediating the transduction of mitogenic signals at the  level of the plasma membrane but also in controlling progression  through the cell cycle via interaction with regulatory proteins in  the nucleus. Plays an important role in osteoclastic bone  resorption in conjunction with PTK2B/PYK2. Both the formation of a  SRC-PTK2B/PYK2 complex and SRC kinase activity are necessary for  this function. Recruited to activated integrins by PTK2B/PYK2,  thereby phosphorylating CBL, which in turn induces the activation  and recruitment of phosphatidylinositol 3-kinase to the cell  membrane in a signaling pathway that is critical for osteoclast  function. Promotes energy production in osteoclasts by activating  mitochondrial cytochrome C oxidase. Phosphorylates DDR2 on  tyrosine residues, thereby promoting its subsequent  autophosphorylation. Phosphorylates RUNX3 and COX2 on tyrosine  residues, TNK2 on 'Tyr-284' and CBL on 'Tyr-731'. Enhances  DDX58/RIG-I-elicited antiviral signaling. Phosphorylates PDPK1 at  'Tyr-9', 'Tyr-373' and 'Tyr-376'. (from UniProt P12931)

NCBI RefSeq genes, curated subset (NM_*, NR_*, NP_* or YP_*)

NM_001042454.3 at chr16:31472152-31477958
NM_001164719.1 at chr16:31472208-31477960
NM_015927.4 at chr16:31473205-31477960

NCBI RefSeq genes, predicted subset (XM_* or XR_*)

XM_024450412.1 at chr16:31472373-31477958

NCBI RefSeq and Ensembl transcripts from the MANE Project (v0.6)

TGFB1I1 at chr16:31472152-31477958

RefSeq Genes

TGFB1I1 at chr16:31472208-31477960 - (NM_001164719) transforming growth factor beta-1-induced transcript 1 protein isoform 2
TGFB1I1 at chr16:31473205-31477960 - (NM_015927) transforming growth factor beta-1-induced transcript 1 protein isoform 2
TGFB1I1 at chr16:31472152-31477958 - (NM_001042454) transforming growth factor beta-1-induced transcript 1 protein isoform 1

Non-Human RefSeq Genes

TGFB1I1 at chr16:31473440-31477956 - (NM_001266172) transforming growth factor beta-1-induced transcript 1 protein
TGFB1I1 at chr12:120212309-120224378 - (NM_204984) paxillin
TGFB1I1 at chr16:31473451-31477947 - (NM_001035313) transforming growth factor beta-1-induced transcript 1 protein
Tgfb1i1 at chr16:31472036-31477582 - (NM_001289552) transforming growth factor beta-1-induced transcript 1 protein isoform c
Tgfb1i1 at chr16:31472036-31477582 - (NM_001289553) transforming growth factor beta-1-induced transcript 1 protein isoform d
Tgfb1i1 at chr16:31472188-31477592 - (NM_001191840) transforming growth factor beta-1-induced transcript 1 protein
Tgfb1i1 at chr16:31472036-31477582 - (NM_001289551) transforming growth factor beta-1-induced transcript 1 protein isoform b
Tgfb1i1 at chr16:31472036-31477582 - (NM_001289550) transforming growth factor beta-1-induced transcript 1 protein isoform a

Basic Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

TGFB1I1 at chr16:31472152-31477958
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958

Comprehensive Gene Annotation Set from GENCODE Version 33 (Ensembl 99)

TGFB1I1 at chr16:31471585-31474590
TGFB1I1 at chr16:31472030-31477600
TGFB1I1 at chr16:31472141-31473939
TGFB1I1 at chr16:31472152-31477958
TGFB1I1 at chr16:31472154-31477600
TGFB1I1 at chr16:31472155-31474095
TGFB1I1 at chr16:31472157-31474239
TGFB1I1 at chr16:31472168-31474759
TGFB1I1 at chr16:31472171-31474100
TGFB1I1 at chr16:31472171-31477958
TGFB1I1 at chr16:31472175-31476288
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473080-31473972
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958
TGFB1I1 at chr16:31473434-31476802
TGFB1I1 at chr16:31473440-31477906

Basic Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TGFB1I1 at chr16:31472152-31477958
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958

Comprehensive Gene Annotation Set from GENCODE Version 31 (Ensembl 97)

TGFB1I1 at chr16:31471585-31474590
TGFB1I1 at chr16:31472030-31477600
TGFB1I1 at chr16:31472141-31473939
TGFB1I1 at chr16:31472152-31477958
TGFB1I1 at chr16:31472154-31477600
TGFB1I1 at chr16:31472155-31474095
TGFB1I1 at chr16:31472157-31474239
TGFB1I1 at chr16:31472168-31474759
TGFB1I1 at chr16:31472171-31474100
TGFB1I1 at chr16:31472171-31477958
TGFB1I1 at chr16:31472175-31476288
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473080-31473972
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958
TGFB1I1 at chr16:31473434-31476802
TGFB1I1 at chr16:31473440-31477906

Basic Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958

Comprehensive Gene Annotation Set from GENCODE Version 29 (Ensembl 94)

TGFB1I1 at chr16:31471585-31474590
TGFB1I1 at chr16:31472030-31477600
TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472141-31473939
TGFB1I1 at chr16:31472154-31477600
TGFB1I1 at chr16:31472155-31474095
TGFB1I1 at chr16:31472157-31474239
TGFB1I1 at chr16:31472168-31474759
TGFB1I1 at chr16:31472171-31474100
TGFB1I1 at chr16:31472171-31477958
TGFB1I1 at chr16:31472175-31476288
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473080-31473972
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958
TGFB1I1 at chr16:31473434-31476802
TGFB1I1 at chr16:31473440-31477906

Basic Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958

Comprehensive Gene Annotation Set from GENCODE Version 28 (Ensembl 92)

TGFB1I1 at chr16:31471585-31474590
TGFB1I1 at chr16:31472030-31477600
TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472141-31473939
TGFB1I1 at chr16:31472154-31477600
TGFB1I1 at chr16:31472155-31474095
TGFB1I1 at chr16:31472157-31474239
TGFB1I1 at chr16:31472168-31474759
TGFB1I1 at chr16:31472171-31474100
TGFB1I1 at chr16:31472171-31477958
TGFB1I1 at chr16:31472175-31476288
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473080-31473972
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958
TGFB1I1 at chr16:31473434-31476802
TGFB1I1 at chr16:31473440-31477906

Basic Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958

Comprehensive Gene Annotation Set from GENCODE Version 27 (Ensembl 90)

TGFB1I1 at chr16:31471585-31474590
TGFB1I1 at chr16:31472030-31477600
TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472141-31473939
TGFB1I1 at chr16:31472154-31477600
TGFB1I1 at chr16:31472155-31474095
TGFB1I1 at chr16:31472157-31474239
TGFB1I1 at chr16:31472168-31474759
TGFB1I1 at chr16:31472171-31474100
TGFB1I1 at chr16:31472171-31477958
TGFB1I1 at chr16:31472175-31476288
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473080-31473972
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958
TGFB1I1 at chr16:31473434-31476802
TGFB1I1 at chr16:31473440-31477906

Basic Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958

Comprehensive Gene Annotation Set from GENCODE Version 26 (Ensembl 88)

TGFB1I1 at chr16:31471585-31474590
TGFB1I1 at chr16:31472030-31477600
TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472141-31473939
TGFB1I1 at chr16:31472154-31477600
TGFB1I1 at chr16:31472155-31474095
TGFB1I1 at chr16:31472157-31474239
TGFB1I1 at chr16:31472168-31474759
TGFB1I1 at chr16:31472171-31474100
TGFB1I1 at chr16:31472171-31477958
TGFB1I1 at chr16:31472175-31476288
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473080-31473972
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958
TGFB1I1 at chr16:31473434-31476802
TGFB1I1 at chr16:31473440-31477906

Basic Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958

Comprehensive Gene Annotation Set from GENCODE Version 25 (Ensembl 85)

TGFB1I1 at chr16:31471585-31474590
TGFB1I1 at chr16:31472030-31477600
TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472141-31473939
TGFB1I1 at chr16:31472154-31477600
TGFB1I1 at chr16:31472155-31474095
TGFB1I1 at chr16:31472157-31474239
TGFB1I1 at chr16:31472168-31474759
TGFB1I1 at chr16:31472171-31474100
TGFB1I1 at chr16:31472171-31477958
TGFB1I1 at chr16:31472175-31476288
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473080-31473972
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958
TGFB1I1 at chr16:31473434-31476802
TGFB1I1 at chr16:31473440-31477906

Basic Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958

Comprehensive Gene Annotation Set from GENCODE Version 24 (Ensembl 83)

TGFB1I1 at chr16:31471585-31474590
TGFB1I1 at chr16:31472030-31477600
TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472141-31473939
TGFB1I1 at chr16:31472154-31477600
TGFB1I1 at chr16:31472155-31474095
TGFB1I1 at chr16:31472157-31474239
TGFB1I1 at chr16:31472168-31474759
TGFB1I1 at chr16:31472171-31474100
TGFB1I1 at chr16:31472171-31477958
TGFB1I1 at chr16:31472175-31476288
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473080-31473972
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958
TGFB1I1 at chr16:31473434-31476802
TGFB1I1 at chr16:31473440-31477906

Basic Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958

Comprehensive Gene Annotation Set from GENCODE Version 23 (Ensembl 81)

TGFB1I1 at chr16:31471585-31474590
TGFB1I1 at chr16:31472030-31477600
TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472141-31473939
TGFB1I1 at chr16:31472154-31477600
TGFB1I1 at chr16:31472155-31474095
TGFB1I1 at chr16:31472157-31474239
TGFB1I1 at chr16:31472168-31474759
TGFB1I1 at chr16:31472171-31474100
TGFB1I1 at chr16:31472171-31477958
TGFB1I1 at chr16:31472175-31476288
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473080-31473972
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958
TGFB1I1 at chr16:31473434-31476802
TGFB1I1 at chr16:31473440-31477906

Basic Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958

Comprehensive Gene Annotation Set from GENCODE Version 22 (Ensembl 79)

TGFB1I1 at chr16:31471585-31474590
TGFB1I1 at chr16:31472030-31477600
TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472141-31473939
TGFB1I1 at chr16:31472154-31477600
TGFB1I1 at chr16:31472155-31474095
TGFB1I1 at chr16:31472157-31474239
TGFB1I1 at chr16:31472168-31474759
TGFB1I1 at chr16:31472171-31474100
TGFB1I1 at chr16:31472171-31477958
TGFB1I1 at chr16:31472175-31476288
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473080-31473972
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958
TGFB1I1 at chr16:31473434-31476802
TGFB1I1 at chr16:31473440-31477906

Basic Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958

Comprehensive Gene Annotation Set from GENCODE Version 20 (Ensembl 76)

TGFB1I1 at chr16:31471585-31474590
TGFB1I1 at chr16:31472030-31477600
TGFB1I1 at chr16:31472059-31477958
TGFB1I1 at chr16:31472141-31473939
TGFB1I1 at chr16:31472154-31477600
TGFB1I1 at chr16:31472155-31474095
TGFB1I1 at chr16:31472157-31474239
TGFB1I1 at chr16:31472168-31474759
TGFB1I1 at chr16:31472171-31474100
TGFB1I1 at chr16:31472171-31477958
TGFB1I1 at chr16:31472175-31476288
TGFB1I1 at chr16:31472208-31477960
TGFB1I1 at chr16:31473080-31473972
TGFB1I1 at chr16:31473205-31477960
TGFB1I1 at chr16:31473426-31477958
TGFB1I1 at chr16:31473434-31476802
TGFB1I1 at chr16:31473440-31477906

International Knockout Mouse Consortium Genes Mapped to Human Genome

Tgfb1i1_76089 at chr16:31472155-31477960
Tgfb1i1_VG10659 at chr16:31472155-31477960

Human Aligned mRNA Search Results

BC001507 - Homo sapiens transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:2432 IMAGE:3030477), complete cds.
BC001830 - Homo sapiens transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:4078 IMAGE:3030477), complete cds.
BC017288 - Homo sapiens transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:29660 IMAGE:4901903), complete cds.
BC032545 - Homo sapiens transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:45093 IMAGE:5535913), complete cds.
AK122975 - Homo sapiens cDNA FLJ16722 fis, clone UTERU3002620, highly similar to Homo sapiens transforming growth factor beta 1 induced transcript 1 (TGFB1I1).
AK313327 - Homo sapiens cDNA, FLJ93847, Homo sapiens transforming growth factor beta 1 induced transcript 1 (TGFB1I1), mRNA.

Non-Human Aligned mRNA Search Results

BC002049 - Mus musculus transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:6057 IMAGE:3489459), complete cds.
MG135057 - Synthetic construct Xenopus tropicalis clone IMAGE:7688067 transforming growth factor beta 1 induced transcript 1 (tgfb1i1) gene, encodes complete protein.
KT852370 - Tachysurus fulvidraco transforming growth factor beta 1 induced transcript 1 (tgfb1i1) mRNA, complete cds.
BC056362 - Mus musculus transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:73451 IMAGE:6816930), complete cds.
DQ143891 - Mus musculus transforming growth factor beta 1 isoform alpha-B (Tgfb1i1) mRNA, complete cds.
DQ143892 - Mus musculus transforming growth factor beta 1 isoform alpha-D (Tgfb1i1) mRNA, complete cds.
DQ143893 - Mus musculus transforming growth factor beta 1 isoform alpha-E (Tgfb1i1) mRNA, complete cds.
DQ143894 - Mus musculus transforming growth factor beta 1 isoform alpha-C (Tgfb1i1) mRNA, complete cds.
DQ143895 - Mus musculus transforming growth factor beta 1 isoform beta-B (Tgfb1i1) mRNA, complete cds.
DQ143896 - Mus musculus transforming growth factor beta 1 isoform beta-C (Tgfb1i1) mRNA, complete cds.
DQ143897 - Mus musculus transforming growth factor beta 1 isoform beta-D (Tgfb1i1) mRNA, complete cds.
DQ143898 - Mus musculus transforming growth factor beta 1 isoform beta-E (Tgfb1i1) mRNA, complete cds.
DQ143899 - Mus musculus transforming growth factor beta 1 isoform beta-F (Tgfb1i1) mRNA, complete cds.
DQ143900 - Mus musculus transforming growth factor beta 1 isoform beta-G (Tgfb1i1) mRNA, complete cds.
BC104510 - Bos taurus transforming growth factor beta 1 induced transcript 1, mRNA (cDNA clone MGC:128848 IMAGE:8119631), complete cds.
AY892297 - Synthetic construct Homo sapiens clone FLH014101.01L transforming growth factor beta 1 induced transcript 1 (TGFB1I1) mRNA, partial cds.
AY892298 - Synthetic construct Homo sapiens clone FLH014102.01L transforming growth factor beta 1 induced transcript 1 (TGFB1I1) mRNA, partial cds.
JI861701 - TSA: Capra hircus 14838.1.Cahikidney mRNA sequence.
JV636344 - TSA: Macaca mulatta Mamu_459862 mRNA sequence.